Experiment: Cerium(III) chloride 0.000195313 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1710 and Pf6N2E2_1711 are separated by 116 nucleotides Pf6N2E2_1711 and Pf6N2E2_1712 overlap by 14 nucleotides Pf6N2E2_1712 and Pf6N2E2_1713 are separated by 5 nucleotides Pf6N2E2_1713 and Pf6N2E2_1714 are separated by 3 nucleotides
Pf6N2E2_1710 - FIG00953587: hypothetical protein, at 2,018,582 to 2,019,856
_1710
Pf6N2E2_1711 - 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9), at 2,019,973 to 2,020,857
_1711
Pf6N2E2_1712 - Permease of the drug/metabolite transporter (DMT) superfamily, at 2,020,844 to 2,021,749
_1712
Pf6N2E2_1713 - iron-sulfur flavoprotein, at 2,021,755 to 2,022,366
_1713
Pf6N2E2_1714 - FIG01218476: hypothetical protein, at 2,022,370 to 2,023,053
_1714
Position (kb)
2020
2021
2022 Strain fitness (log2 ratio)
-2
-1
0
1 at 2019.847 kb on + strand at 2019.847 kb on + strand at 2020.037 kb on + strand at 2020.123 kb on + strand, within Pf6N2E2_1711 at 2020.123 kb on + strand, within Pf6N2E2_1711 at 2020.124 kb on - strand, within Pf6N2E2_1711 at 2020.399 kb on + strand, within Pf6N2E2_1711 at 2020.472 kb on + strand, within Pf6N2E2_1711 at 2020.473 kb on - strand, within Pf6N2E2_1711 at 2020.473 kb on - strand, within Pf6N2E2_1711 at 2021.118 kb on + strand, within Pf6N2E2_1712 at 2021.118 kb on + strand, within Pf6N2E2_1712 at 2021.119 kb on - strand, within Pf6N2E2_1712 at 2021.488 kb on + strand, within Pf6N2E2_1712 at 2021.488 kb on + strand, within Pf6N2E2_1712 at 2021.488 kb on + strand, within Pf6N2E2_1712 at 2021.518 kb on - strand, within Pf6N2E2_1712 at 2022.134 kb on + strand, within Pf6N2E2_1713 at 2022.407 kb on + strand at 2022.520 kb on - strand, within Pf6N2E2_1714 at 2022.638 kb on + strand, within Pf6N2E2_1714 at 2022.662 kb on + strand, within Pf6N2E2_1714
Per-strain Table
Position Strand Gene LocusTag Fraction Cerium(III) chloride 0.000195313 M remove 2,019,847 + -0.3 2,019,847 + +0.8 2,020,037 + -0.7 2,020,123 + Pf6N2E2_1711 0.17 +0.8 2,020,123 + Pf6N2E2_1711 0.17 +0.2 2,020,124 - Pf6N2E2_1711 0.17 +0.6 2,020,399 + Pf6N2E2_1711 0.48 +0.2 2,020,472 + Pf6N2E2_1711 0.56 -0.5 2,020,473 - Pf6N2E2_1711 0.56 +0.9 2,020,473 - Pf6N2E2_1711 0.56 +0.8 2,021,118 + Pf6N2E2_1712 0.30 +0.4 2,021,118 + Pf6N2E2_1712 0.30 +1.2 2,021,119 - Pf6N2E2_1712 0.30 -0.9 2,021,488 + Pf6N2E2_1712 0.71 +0.2 2,021,488 + Pf6N2E2_1712 0.71 +1.1 2,021,488 + Pf6N2E2_1712 0.71 +0.3 2,021,518 - Pf6N2E2_1712 0.74 +0.8 2,022,134 + Pf6N2E2_1713 0.62 +0.3 2,022,407 + -1.9 2,022,520 - Pf6N2E2_1714 0.22 +0.4 2,022,638 + Pf6N2E2_1714 0.39 +0.2 2,022,662 + Pf6N2E2_1714 0.43 +0.1
Or see this region's nucleotide sequence