Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02816

Experiment: PYE 4C survival rep2 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C survival rep2 58 days
2,972,553	-		CCNA_02815	0.50	-1.0
2,972,576	+		CCNA_02815	0.51	-0.2
2,972,579	+		CCNA_02815	0.52	+0.6
2,972,584	-		CCNA_02815	0.52	-0.9
2,972,586	+		CCNA_02815	0.52	-1.6
2,972,612	-		CCNA_02815	0.53	-0.2
2,972,665	+		CCNA_02815	0.56	+0.9
2,972,673	-		CCNA_02815	0.56	-0.0
2,972,673	-		CCNA_02815	0.56	+0.9
2,972,675	+		CCNA_02815	0.56	+0.4
2,972,676	+		CCNA_02815	0.56	+1.0
2,972,676	-		CCNA_02815	0.56	+0.2
2,972,721	-		CCNA_02815	0.59	+0.8
2,972,724	+		CCNA_02815	0.59	-0.9
2,972,800	-		CCNA_02815	0.63	-0.8
2,972,805	-		CCNA_02815	0.63	-2.4
2,972,812	-		CCNA_02815	0.63	+0.1
2,972,819	+		CCNA_02815	0.64	+1.3
2,972,833	+		CCNA_02815	0.64	+0.1
2,972,834	-		CCNA_02815	0.64	-1.3
2,972,836	-		CCNA_02815	0.65	-1.9
2,972,836	-		CCNA_02815	0.65	-1.3
2,972,841	-		CCNA_02815	0.65	-1.9
2,972,878	+		CCNA_02815	0.67	-0.4
2,972,884	+		CCNA_02815	0.67	+2.0
2,972,884	+		CCNA_02815	0.67	-0.8
2,972,884	+		CCNA_02815	0.67	+1.0
2,972,884	+		CCNA_02815	0.67	+0.6
2,972,892	-		CCNA_02815	0.67	+0.8
2,972,892	-		CCNA_02815	0.67	+0.6
2,972,892	-		CCNA_02815	0.67	-1.3
2,972,892	-		CCNA_02815	0.67	+0.2
2,972,892	-		CCNA_02815	0.67	-0.9
2,972,934	-		CCNA_02815	0.70	-0.3
2,972,939	-		CCNA_02815	0.70	-0.5
2,972,977	+		CCNA_02815	0.72	-2.9
2,972,977	+		CCNA_02815	0.72	+0.1
2,973,003	+		CCNA_02815	0.73	-1.2
2,973,012	-		CCNA_02815	0.74	+1.1
2,973,020	+		CCNA_02815	0.74	-0.8
2,973,020	+		CCNA_02815	0.74	+1.0
2,973,020	+		CCNA_02815	0.74	-1.1
2,973,025	+		CCNA_02815	0.74	-0.9
2,973,028	-		CCNA_02815	0.74	-0.2
2,973,030	+		CCNA_02815	0.74	-0.9
2,973,030	+		CCNA_02815	0.74	-0.8
2,973,038	-		CCNA_02815	0.75	-0.7
2,973,038	-		CCNA_02815	0.75	+1.3
2,973,043	-		CCNA_02815	0.75	+0.7
2,973,073	+		CCNA_02815	0.77	-0.7
2,973,073	+		CCNA_02815	0.77	-1.0
2,973,076	-		CCNA_02815	0.77	-0.6
2,973,081	-		CCNA_02815	0.77	-0.0
2,973,092	+		CCNA_02815	0.78	-1.3
2,973,092	+		CCNA_02815	0.78	+0.7
2,973,092	+		CCNA_02815	0.78	-1.2
2,973,092	+		CCNA_02815	0.78	+1.1
2,973,092	+		CCNA_02815	0.78	-0.7
2,973,092	+		CCNA_02815	0.78	-0.7
2,973,092	+				+0.1
2,973,092	+		CCNA_02815	0.78	-0.3
2,973,092	+		CCNA_02815	0.78	+1.7
2,973,092	+		CCNA_02815	0.78	+0.2
2,973,092	+		CCNA_02815	0.78	-0.2
2,973,092	+		CCNA_02815	0.78	-1.1
2,973,092	+		CCNA_02815	0.78	-0.1
2,973,092	+		CCNA_02815	0.78	+1.7
2,973,092	+		CCNA_02815	0.78	+0.8
2,973,092	+		CCNA_02815	0.78	+1.1
2,973,092	+		CCNA_02815	0.78	-1.7
2,973,092	+		CCNA_02815	0.78	-1.9
2,973,100	-		CCNA_02815	0.78	-0.1
2,973,100	-		CCNA_02815	0.78	-1.9
2,973,100	-		CCNA_02815	0.78	+0.7
2,973,100	-		CCNA_02815	0.78	-0.5
2,973,100	-		CCNA_02815	0.78	+0.4
2,973,100	-		CCNA_02815	0.78	+1.3
2,973,100	-		CCNA_02815	0.78	+0.4
2,973,100	-		CCNA_02815	0.78	+0.9
2,973,100	-		CCNA_02815	0.78	+0.1
2,973,100	-		CCNA_02815	0.78	-1.1
2,973,100	-		CCNA_02815	0.78	-0.1
2,973,100	-		CCNA_02815	0.78	-1.4
2,973,100	-		CCNA_02815	0.78	+1.8
2,973,100	-		CCNA_02815	0.78	-0.5
2,973,100	-		CCNA_02815	0.78	-1.4
2,973,100	-		CCNA_02815	0.78	-2.2
2,973,100	-		CCNA_02815	0.78	+2.4
2,973,100	-		CCNA_02815	0.78	-0.7
2,973,100	-		CCNA_02815	0.78	-0.0
2,973,100	-		CCNA_02815	0.78	+1.6
2,973,100	-		CCNA_02815	0.78	-0.7
2,973,100	-		CCNA_02815	0.78	-0.1
2,973,100	-		CCNA_02815	0.78	-2.7
2,973,100	-		CCNA_02815	0.78	-1.1
2,973,100	-		CCNA_02815	0.78	-0.6
2,973,100	-		CCNA_02815	0.78	-0.3
2,973,100	-		CCNA_02815	0.78	+0.5
2,973,100	-		CCNA_02815	0.78	-0.3
2,973,123	-		CCNA_02815	0.79	+0.9
2,973,123	-		CCNA_02815	0.79	-0.4
2,973,123	-		CCNA_02815	0.79	+1.1
2,973,124	-		CCNA_02815	0.79	+1.2
2,973,157	+		CCNA_02815	0.81	-0.3
2,973,168	-		CCNA_02815	0.81	+0.6
2,973,179	+		CCNA_02815	0.82	-0.4
2,973,198	+		CCNA_02815	0.83	-0.4
2,973,205	+		CCNA_02815	0.83	-0.7
2,973,205	+		CCNA_02815	0.83	+0.1
2,973,205	+		CCNA_02815	0.83	-2.4
2,973,205	+		CCNA_02815	0.83	-0.0
2,973,213	-		CCNA_02815	0.84	-1.5
2,973,213	-		CCNA_02815	0.84	+0.1
2,973,213	-		CCNA_02815	0.84	+0.7
2,973,213	-		CCNA_02815	0.84	+2.7
2,973,213	-		CCNA_02815	0.84	-2.4
2,973,213	-		CCNA_02815	0.84	+2.7
2,973,226	+		CCNA_02815	0.84	+2.1
2,973,236	-		CCNA_02815	0.85	+2.7
2,973,244	-		CCNA_02815	0.85	-0.7
2,973,278	-		CCNA_02815	0.87	-1.9
2,973,278	-		CCNA_02815	0.87	+0.3
2,973,301	-		CCNA_02815	0.88	-0.3
2,973,301	-				+1.7
2,973,304	+		CCNA_02815	0.88	+0.9
2,973,312	-		CCNA_02815	0.89	+0.1
2,973,331	+		CCNA_02815	0.90	-1.4
2,973,342	+				-0.3
2,973,350	+				+0.3
2,973,368	-				+0.2
2,973,386	+				+0.9
2,973,396	-				+1.4
2,973,453	+				+3.3
2,973,461	-				-1.2
2,973,461	-				-1.5
2,973,461	-				+0.7
2,973,520	+				-1.4
2,973,524	+				+4.7
2,973,528	+				-0.7
2,973,532	+				-1.4
2,973,532	-				-2.5
2,973,540	-				-0.5
2,973,542	-				+1.0
2,973,542	-				+1.3
2,973,542	-				+0.9
2,973,547	+				+0.5
2,973,555	-				+1.1
2,973,681	-		CCNA_02816	0.39	-1.8
2,973,682	+		CCNA_02816	0.39	-0.3
2,973,701	+		CCNA_02816	0.44	-0.0
2,973,709	-		CCNA_02816	0.46	-1.4
2,973,709	-		CCNA_02816	0.46	-1.1
2,973,830	-		CCNA_02816	0.79	-2.5
2,973,956	+				-1.2
2,973,986	-				-1.1
2,974,010	-		CCNA_02817	0.15	-0.8
2,974,068	+		CCNA_02817	0.44	+0.3
2,974,076	-		CCNA_02817	0.48	+1.6
2,974,130	-		CCNA_02817	0.74	+0.7
2,974,135	-		CCNA_02817	0.76	-0.9
2,974,154	+		CCNA_02817	0.86	-1.0
2,974,178	-				-1.0
2,974,190	-				+0.2
2,974,190	-				-0.2
2,974,190	-				+0.8
2,974,190	-				+1.2
2,974,207	+				+2.1
2,974,214	+				-2.6
2,974,226	+				-0.2
2,974,234	-				+1.0
2,974,234	-				-0.0
2,974,234	-				-0.1
2,974,269	-				-0.9
2,974,278	+				-0.7
2,974,286	-				-0.1
2,974,317	+				+2.1
2,974,325	-				-0.2
2,974,325	-				-0.9
2,974,383	+				-1.6
2,974,389	+				-1.3
2,974,390	+				-2.1
2,974,398	+				-1.0
2,974,400	+				+1.9
2,974,404	-				-1.0
2,974,416	+				+2.7
2,974,416	+				+0.1
2,974,416	+				+2.7
2,974,416	+				+1.7
2,974,416	+				-0.3
2,974,421	+				+2.3
2,974,424	-				+1.1
2,974,424	-				-0.6
2,974,424	-				+0.0
2,974,429	-				-1.1
2,974,452	+				+2.7
2,974,460	-				-0.3
2,974,469	+				-0.8
2,974,477	-				-0.5
2,974,487	-				-0.8
2,974,494	+				+1.2
2,974,494	+				-1.5
2,974,494	+				-0.7
2,974,494	+				+0.1
2,974,494	+				-0.1
2,974,494	+				+0.1
2,974,494	+				-1.5
2,974,494	+				+0.1
2,974,494	+				+0.1
2,974,494	+				+1.7
2,974,494	+				+1.1
2,974,501	+				+0.3
2,974,501	+				+2.7
2,974,501	+				+2.7
2,974,501	+				-1.3
2,974,502	-				-2.4
2,974,502	-				-1.2
2,974,502	-				-0.2
2,974,502	-				-0.1
2,974,502	-				-0.9
2,974,502	-				+2.7
2,974,502	-				-1.4
2,974,502	-				-1.7
2,974,502	-				+2.7
2,974,502	-				+2.7
2,974,502	-				+2.7
2,974,502	-				-1.6
2,974,502	-				-0.8
2,974,502	-				+1.1
2,974,502	-				-0.5
2,974,502	-				+2.7
2,974,502	-				+1.1
2,974,509	-				+1.1
2,974,513	+				+0.7
2,974,513	+				-1.4
2,974,513	+				+1.3
2,974,521	-				-0.7
2,974,521	-				+1.1
2,974,537	+				-0.3
2,974,560	-				+1.8
2,974,597	+				-0.7
2,974,597	+				-1.8
2,974,605	+				+0.7
2,974,605	-				-1.9
2,974,605	-				-0.7
2,974,605	-				-0.3
2,974,607	+				+0.3
2,974,607	+				+1.1
2,974,607	+				-0.1
2,974,613	-				+0.1
2,974,613	-				-1.7
2,974,615	-				+0.7
2,974,615	-				+2.7
2,974,663	+				+0.3
2,974,673	+				-4.2
2,974,674	+				+0.3
2,974,682	-				+0.3
2,974,682	-				-0.3
2,974,684	+				-2.6
2,974,684	+				+0.1
2,974,694	+				+1.1
2,974,720	+				-1.1
2,974,722	+				+3.3
2,974,730	-				+2.7
2,974,730	-				+1.4
2,974,735	-				-1.5
2,974,735	-				-1.4
2,974,761	+				-0.5
2,974,785	+				-2.4
2,974,793	-				-2.2
2,974,808	+				+0.6
2,974,826	+				+0.3
2,974,855	+				+0.3