Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02714

Experiment: PYE 4C survival rep2 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C survival rep2 58 days
2,872,174	+		CCNA_02713	0.31	+0.8
2,872,174	+		CCNA_02713	0.31	+1.3
2,872,182	-		CCNA_02713	0.31	+0.3
2,872,182	-		CCNA_02713	0.31	-0.5
2,872,189	+		CCNA_02713	0.32	+1.0
2,872,192	-		CCNA_02713	0.32	-0.2
2,872,197	-		CCNA_02713	0.33	+2.6
2,872,227	+		CCNA_02713	0.35	+1.1
2,872,227	+		CCNA_02713	0.35	+0.4
2,872,227	+		CCNA_02713	0.35	-0.0
2,872,263	+		CCNA_02713	0.38	-0.3
2,872,272	-		CCNA_02713	0.39	+1.4
2,872,272	-		CCNA_02713	0.39	+1.6
2,872,272	-		CCNA_02713	0.39	-1.1
2,872,278	-		CCNA_02713	0.39	-3.2
2,872,289	+		CCNA_02713	0.40	+1.0
2,872,289	-		CCNA_02713	0.40	-0.0
2,872,300	+		CCNA_02713	0.41	+0.3
2,872,301	+		CCNA_02713	0.41	+0.4
2,872,308	-		CCNA_02713	0.42	-1.8
2,872,312	+		CCNA_02713	0.42	+0.8
2,872,349	+		CCNA_02713	0.45	+1.3
2,872,356	-		CCNA_02713	0.45	+1.4
2,872,398	-		CCNA_02713	0.49	+0.3
2,872,445	+		CCNA_02713	0.52	-0.4
2,872,477	+		CCNA_02713	0.55	-0.8
2,872,482	+		CCNA_02713	0.55	-0.3
2,872,482	+		CCNA_02713	0.55	-0.5
2,872,482	+		CCNA_02713	0.55	+0.5
2,872,482	+		CCNA_02713	0.55	+0.7
2,872,485	-		CCNA_02713	0.56	-0.7
2,872,490	-		CCNA_02713	0.56	-2.0
2,872,490	-		CCNA_02713	0.56	-1.2
2,872,490	-		CCNA_02713	0.56	-0.2
2,872,490	-		CCNA_02713	0.56	-0.6
2,872,490	-		CCNA_02713	0.56	+1.0
2,872,490	-		CCNA_02713	0.56	+0.3
2,872,490	-		CCNA_02713	0.56	+0.3
2,872,536	+		CCNA_02713	0.60	+1.0
2,872,542	-		CCNA_02713	0.60	-1.6
2,872,544	-		CCNA_02713	0.60	-0.7
2,872,574	+		CCNA_02713	0.63	+0.8
2,872,623	+		CCNA_02713	0.67	-1.1
2,872,623	+		CCNA_02713	0.67	-0.6
2,872,631	+		CCNA_02713	0.67	+1.4
2,872,631	+		CCNA_02713	0.67	-0.1
2,872,631	+		CCNA_02713	0.67	+0.9
2,872,631	+		CCNA_02713	0.67	-0.4
2,872,639	-		CCNA_02713	0.68	-2.7
2,872,639	-		CCNA_02713	0.68	-0.8
2,872,639	-		CCNA_02713	0.68	-1.0
2,872,639	-		CCNA_02713	0.68	-0.7
2,872,658	-		CCNA_02713	0.70	-1.4
2,872,659	-		CCNA_02713	0.70	-1.2
2,872,661	+		CCNA_02713	0.70	+1.2
2,872,664	-		CCNA_02713	0.70	+1.3
2,872,671	+		CCNA_02713	0.71	+0.5
2,872,679	-		CCNA_02713	0.71	-1.8
2,872,679	-		CCNA_02713	0.71	-1.0
2,872,681	+		CCNA_02713	0.71	+0.5
2,872,681	+		CCNA_02713	0.71	+0.5
2,872,681	+		CCNA_02713	0.71	+0.0
2,872,681	+		CCNA_02713	0.71	-0.3
2,872,689	-		CCNA_02713	0.72	-1.1
2,872,689	-		CCNA_02713	0.72	-1.1
2,872,689	-		CCNA_02713	0.72	+0.4
2,872,700	-		CCNA_02713	0.73	+0.6
2,872,700	-		CCNA_02713	0.73	+0.2
2,872,727	-		CCNA_02713	0.75	-1.5
2,872,727	-		CCNA_02713	0.75	+0.8
2,872,727	-		CCNA_02713	0.75	-0.7
2,872,751	+		CCNA_02713	0.77	+1.2
2,872,761	+		CCNA_02713	0.78	-0.5
2,872,769	-		CCNA_02713	0.78	+1.3
2,872,788	-		CCNA_02713	0.80	-1.0
2,872,813	+		CCNA_02713	0.82	+0.6
2,872,869	-		CCNA_02713	0.86	-1.2
2,872,901	+		CCNA_02713	0.89	+1.3
2,872,906	+		CCNA_02713	0.89	+0.9
2,872,919	-				-1.6
2,872,946	-				-0.4
2,872,956	+				-0.3
2,873,009	+				+0.2
2,873,097	+				+1.0
2,873,097	+				-2.0
2,873,097	+				-0.7
2,873,100	-				-0.2
2,873,105	-				-1.8
2,873,105	-				+0.6
2,873,105	-				-0.6
2,873,105	-				-2.9
2,873,130	+				+4.2
2,873,151	-				+0.3
2,873,151	-				+0.6
2,873,152	+				+1.5
2,873,152	+				+0.0
2,873,157	+				-0.3
2,873,160	-				-0.6
2,873,233	+				-2.1
2,873,240	+				-0.8
2,873,241	-				+2.6
2,873,246	+				-0.2
2,873,246	+				-0.7
2,873,278	+				-0.6
2,873,296	+				-0.6
2,873,321	-				-1.1
2,873,359	+		CCNA_02714	0.11	-0.1
2,873,359	+		CCNA_02714	0.11	+1.8
2,873,377	-		CCNA_02714	0.12	-0.8
2,873,392	-		CCNA_02714	0.13	-2.2
2,873,419	+		CCNA_02714	0.14	-0.6
2,873,419	+		CCNA_02714	0.14	+1.3
2,873,419	+		CCNA_02714	0.14	+0.3
2,873,427	-		CCNA_02714	0.15	-1.6
2,873,446	+		CCNA_02714	0.16	-0.4
2,873,451	+		CCNA_02714	0.16	-0.6
2,873,451	+		CCNA_02714	0.16	+0.3
2,873,452	-		CCNA_02714	0.16	+2.6
2,873,452	-		CCNA_02714	0.16	+1.0
2,873,459	-		CCNA_02714	0.17	+0.0
2,873,480	+		CCNA_02714	0.18	-1.4
2,873,485	+		CCNA_02714	0.18	+0.5
2,873,520	-		CCNA_02714	0.20	-1.5
2,873,547	+		CCNA_02714	0.21	+1.0
2,873,547	+		CCNA_02714	0.21	-0.3
2,873,555	-		CCNA_02714	0.22	-0.5
2,873,567	+		CCNA_02714	0.23	-0.6
2,873,576	-		CCNA_02714	0.23	-0.1
2,873,657	+		CCNA_02714	0.27	-1.8
2,873,662	+		CCNA_02714	0.28	-0.3
2,873,662	+		CCNA_02714	0.28	-1.3
2,873,670	-		CCNA_02714	0.28	-1.2
2,873,675	+		CCNA_02714	0.28	-1.3
2,873,689	+		CCNA_02714	0.29	+1.1
2,873,689	+		CCNA_02714	0.29	-1.8
2,873,699	+		CCNA_02714	0.30	-1.4
2,873,720	+		CCNA_02714	0.31	-2.1
2,873,766	+		CCNA_02714	0.33	-2.1
2,873,777	+		CCNA_02714	0.34	-0.6
2,873,785	-		CCNA_02714	0.34	+0.3
2,873,809	-		CCNA_02714	0.36	+1.0
2,873,830	+		CCNA_02714	0.37	-0.4
2,873,864	-		CCNA_02714	0.39	-1.9
2,873,864	-		CCNA_02714	0.39	-0.6
2,873,866	+		CCNA_02714	0.39	-2.2
2,873,866	+		CCNA_02714	0.39	+1.6
2,873,908	+		CCNA_02714	0.41	-2.1
2,873,944	+		CCNA_02714	0.43	+0.2
2,873,960	-		CCNA_02714	0.44	-2.9
2,873,964	+		CCNA_02714	0.44	+0.2
2,873,971	+		CCNA_02714	0.45	-2.0
2,873,979	+		CCNA_02714	0.45	-1.0
2,873,979	-		CCNA_02714	0.45	-0.2
2,874,094	+		CCNA_02714	0.51	-0.4
2,874,094	+		CCNA_02714	0.51	+0.2
2,874,094	+		CCNA_02714	0.51	-0.6
2,874,094	+		CCNA_02714	0.51	-0.4
2,874,094	+		CCNA_02714	0.51	-1.9
2,874,094	+		CCNA_02714	0.51	-1.6
2,874,094	+		CCNA_02714	0.51	-0.4
2,874,102	-		CCNA_02714	0.52	-0.4
2,874,102	-		CCNA_02714	0.52	-1.1
2,874,102	-		CCNA_02714	0.52	+4.2
2,874,102	-		CCNA_02714	0.52	-2.4
2,874,102	-		CCNA_02714	0.52	-0.9
2,874,102	-		CCNA_02714	0.52	-1.5
2,874,102	-		CCNA_02714	0.52	-1.4
2,874,102	-		CCNA_02714	0.52	+2.6
2,874,102	-		CCNA_02714	0.52	-2.0
2,874,102	-		CCNA_02714	0.52	+0.0
2,874,102	-		CCNA_02714	0.52	-0.8
2,874,118	+		CCNA_02714	0.53	+0.0
2,874,118	+		CCNA_02714	0.53	+0.2
2,874,126	-		CCNA_02714	0.53	+0.1
2,874,126	-		CCNA_02714	0.53	-0.3
2,874,151	+		CCNA_02714	0.55	-1.5
2,874,175	+		CCNA_02714	0.56	+0.8
2,874,188	-		CCNA_02714	0.57	-1.5
2,874,199	-		CCNA_02714	0.57	+0.0
2,874,199	-		CCNA_02714	0.57	-1.6
2,874,199	-		CCNA_02714	0.57	-0.4
2,874,206	+		CCNA_02714	0.58	-2.0
2,874,255	-		CCNA_02714	0.60	-0.1
2,874,255	-		CCNA_02714	0.60	+0.7
2,874,256	+		CCNA_02714	0.60	-3.4
2,874,263	-		CCNA_02714	0.61	+2.4
2,874,269	-		CCNA_02714	0.61	+0.0
2,874,289	-		CCNA_02714	0.62	-0.8
2,874,300	+		CCNA_02714	0.63	-0.4
2,874,308	-		CCNA_02714	0.63	-0.8
2,874,308	-		CCNA_02714	0.63	-1.6
2,874,322	+		CCNA_02714	0.64	-1.4
2,874,328	+		CCNA_02714	0.64	-0.4
2,874,365	+		CCNA_02714	0.66	-0.1
2,874,408	-		CCNA_02714	0.69	-0.7
2,874,412	+		CCNA_02714	0.69	-0.7
2,874,417	+		CCNA_02714	0.69	-1.8
2,874,420	-		CCNA_02714	0.69	-0.2
2,874,420	-		CCNA_02714	0.69	+0.3
2,874,439	-		CCNA_02714	0.70	+0.6
2,874,439	-		CCNA_02714	0.70	-0.4
2,874,461	+		CCNA_02714	0.71	-0.2
2,874,476	+		CCNA_02714	0.72	+0.4
2,874,484	-		CCNA_02714	0.73	-0.8
2,874,523	+		CCNA_02714	0.75	-0.8
2,874,536	-		CCNA_02714	0.76	-0.6
2,874,573	-		CCNA_02714	0.78	+0.5
2,874,577	+		CCNA_02714	0.78	+1.2
2,874,585	-		CCNA_02714	0.78	+0.6
2,874,591	+		CCNA_02714	0.79	-0.3
2,874,598	+		CCNA_02714	0.79	+0.8
2,874,598	+		CCNA_02714	0.79	-1.6
2,874,599	-		CCNA_02714	0.79	-0.2
2,874,606	-		CCNA_02714	0.79	+0.0
2,874,606	-		CCNA_02714	0.79	-2.3
2,874,610	+				+2.6
2,874,648	-		CCNA_02714	0.82	+0.6
2,874,658	+		CCNA_02714	0.82	+2.6
2,874,702	+		CCNA_02714	0.85	+0.1
2,874,735	+		CCNA_02714	0.86	-2.6
2,874,753	+		CCNA_02714	0.87	-1.6
2,874,753	+		CCNA_02714	0.87	-0.9
2,874,771	-		CCNA_02714	0.88	+1.3
2,874,773	+		CCNA_02714	0.89	+0.3
2,874,773	+		CCNA_02714	0.89	-1.2
2,874,781	-		CCNA_02714	0.89	-0.2
2,874,833	-				-0.7
2,874,835	+				+1.0
2,874,835	+				-1.9
2,874,860	-				+4.2
2,874,861	-				+0.3
2,874,879	+				+1.0
2,874,883	-				+2.0
2,874,903	-				+0.0
2,874,903	-				-0.8
2,874,917	+				-1.8
2,874,975	-				-1.8
2,874,989	+				+0.3
2,875,004	-				+2.6
2,875,009	-				+0.0
2,875,050	+				+0.6
2,875,067	+				-0.3
2,875,067	+				+1.2
2,875,067	+				-1.2
2,875,067	+				+1.4
2,875,067	+				+0.2
2,875,067	+				+0.7
2,875,067	+				-0.1
2,875,067	+				-0.8
2,875,075	-				-2.0
2,875,075	-				-0.0
2,875,075	-				-2.6
2,875,075	-				-2.2
2,875,100	-				-1.2
2,875,100	-				-0.6
2,875,100	-				-0.1
2,875,113	+				+0.5
2,875,113	+				-0.6
2,875,113	+				+1.0
2,875,113	+				-2.4
2,875,120	+				+1.4
2,875,120	+				-1.9
2,875,121	-				+0.3
2,875,137	+				+0.4
2,875,138	-				-1.6
2,875,138	-				-0.7
2,875,138	-				-0.9
2,875,142	+				-0.5
2,875,145	-				-0.1
2,875,145	-				-0.2
2,875,156	-				+1.0
2,875,160	+				+0.8
2,875,178	+				-0.2
2,875,186	-				+0.7
2,875,186	-				-1.7
2,875,204	+				+0.1
2,875,204	+				-1.1
2,875,204	+				-2.4
2,875,204	+				+1.0
2,875,212	-				-1.2
2,875,212	-				+0.3
2,875,234	-				+0.0
2,875,236	-				-0.8
2,875,238	+				-2.3
2,875,287	+				+0.2
2,875,307	+				+0.6
2,875,307	+				-2.9
2,875,315	-				-0.8
2,875,383	+				-0.2
2,875,435	+		CCNA_02715	0.11	-1.2
2,875,450	+		CCNA_02715	0.12	+1.1
2,875,450	+		CCNA_02715	0.12	-1.3
2,875,450	+		CCNA_02715	0.12	-2.2
2,875,450	+		CCNA_02715	0.12	-3.2
2,875,458	-		CCNA_02715	0.13	+0.0
2,875,458	-		CCNA_02715	0.13	-0.7
2,875,472	+		CCNA_02715	0.13	+0.3
2,875,493	+		CCNA_02715	0.14	+0.3
2,875,497	-		CCNA_02715	0.14	-1.8
2,875,520	+		CCNA_02715	0.16	-1.8
2,875,526	-		CCNA_02715	0.16	-1.1
2,875,527	-		CCNA_02715	0.16	+0.0
2,875,540	+		CCNA_02715	0.17	+0.3
2,875,542	+		CCNA_02715	0.17	-1.8
2,875,604	+		CCNA_02715	0.20	-2.2
2,875,609	+		CCNA_02715	0.20	+1.0
2,875,609	+		CCNA_02715	0.20	-0.7
2,875,612	-		CCNA_02715	0.20	-1.6
2,875,622	-		CCNA_02715	0.20	-0.9
2,875,674	-		CCNA_02715	0.23	+0.6
2,875,681	-		CCNA_02715	0.23	-0.6
2,875,685	+		CCNA_02715	0.23	-0.5
2,875,685	+		CCNA_02715	0.23	-2.4
2,875,686	-		CCNA_02715	0.24	-0.2
2,875,716	+		CCNA_02715	0.25	-2.2
2,875,724	-		CCNA_02715	0.25	+1.6
2,875,794	+		CCNA_02715	0.29	-2.0
2,875,805	+		CCNA_02715	0.29	-0.8
2,875,805	+		CCNA_02715	0.29	-1.2
2,875,813	-		CCNA_02715	0.30	+1.0
2,875,813	-		CCNA_02715	0.30	+2.6
2,875,813	-		CCNA_02715	0.30	-2.1
2,875,818	-		CCNA_02715	0.30	-2.8
2,875,818	-		CCNA_02715	0.30	-2.4
2,875,844	+		CCNA_02715	0.31	+0.0
2,875,852	-		CCNA_02715	0.32	+2.6
2,875,852	-				+0.6
2,875,852	-		CCNA_02715	0.32	-1.1
2,875,852	-		CCNA_02715	0.32	-0.8
2,875,852	-		CCNA_02715	0.32	-0.4
2,875,852	-		CCNA_02715	0.32	-1.5
2,875,859	-		CCNA_02715	0.32	-2.3
2,875,938	-		CCNA_02715	0.36	-0.6
2,875,942	+		CCNA_02715	0.36	-2.4
2,875,967	-		CCNA_02715	0.37	-2.3
2,875,976	+		CCNA_02715	0.37	-1.4
2,875,976	+		CCNA_02715	0.37	-0.7
2,875,976	+		CCNA_02715	0.37	-0.2
2,875,981	+		CCNA_02715	0.38	-1.8