Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27900 and BWI76_RS27905 are separated by 138 nucleotides BWI76_RS27905 and BWI76_RS27910 are separated by 118 nucleotides BWI76_RS27910 and BWI76_RS27915 are separated by 367 nucleotides BWI76_RS27915 and BWI76_RS27920 are separated by 1 nucleotides
BWI76_RS27900: BWI76_RS27900 - DNA damage-inducible protein D, at 5,787,280 to 5,788,106
_RS27900
BWI76_RS27905: BWI76_RS27905 - heat-shock protein IbpB, at 5,788,245 to 5,788,673
_RS27905
BWI76_RS27910: BWI76_RS27910 - heat-shock protein IbpA, at 5,788,792 to 5,789,205
_RS27910
BWI76_RS27915: BWI76_RS27915 - YceK/YidQ family lipoprotein, at 5,789,573 to 5,789,905
_RS27915
BWI76_RS27920: BWI76_RS27920 - hypothetical protein, at 5,789,907 to 5,791,133
_RS27920
Position (kb)
5788
5789
5790 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5787.845 kb on - strand, within BWI76_RS27900 at 5787.854 kb on + strand, within BWI76_RS27900 at 5787.871 kb on - strand, within BWI76_RS27900 at 5787.918 kb on - strand, within BWI76_RS27900 at 5787.924 kb on + strand, within BWI76_RS27900 at 5787.950 kb on + strand, within BWI76_RS27900 at 5788.015 kb on + strand, within BWI76_RS27900 at 5788.042 kb on + strand at 5788.050 kb on - strand at 5788.180 kb on + strand at 5788.399 kb on - strand, within BWI76_RS27905 at 5788.421 kb on - strand, within BWI76_RS27905 at 5788.531 kb on - strand, within BWI76_RS27905 at 5788.531 kb on - strand, within BWI76_RS27905 at 5788.566 kb on + strand, within BWI76_RS27905 at 5788.666 kb on - strand at 5788.675 kb on + strand at 5788.714 kb on - strand at 5788.846 kb on + strand, within BWI76_RS27910 at 5788.850 kb on + strand, within BWI76_RS27910 at 5788.850 kb on + strand, within BWI76_RS27910 at 5788.850 kb on + strand, within BWI76_RS27910 at 5788.850 kb on + strand, within BWI76_RS27910 at 5788.858 kb on - strand, within BWI76_RS27910 at 5788.858 kb on - strand, within BWI76_RS27910 at 5788.858 kb on - strand, within BWI76_RS27910 at 5788.858 kb on - strand, within BWI76_RS27910 at 5788.858 kb on - strand, within BWI76_RS27910 at 5788.858 kb on - strand, within BWI76_RS27910 at 5788.858 kb on - strand, within BWI76_RS27910 at 5788.864 kb on + strand, within BWI76_RS27910 at 5788.940 kb on + strand, within BWI76_RS27910 at 5788.947 kb on - strand, within BWI76_RS27910 at 5788.950 kb on + strand, within BWI76_RS27910 at 5788.951 kb on - strand, within BWI76_RS27910 at 5788.962 kb on + strand, within BWI76_RS27910 at 5788.985 kb on + strand, within BWI76_RS27910 at 5789.000 kb on + strand, within BWI76_RS27910 at 5789.008 kb on - strand, within BWI76_RS27910 at 5789.008 kb on - strand, within BWI76_RS27910 at 5789.063 kb on + strand, within BWI76_RS27910 at 5789.071 kb on - strand, within BWI76_RS27910 at 5789.095 kb on + strand, within BWI76_RS27910 at 5789.095 kb on + strand, within BWI76_RS27910 at 5789.095 kb on + strand, within BWI76_RS27910 at 5789.095 kb on + strand, within BWI76_RS27910 at 5789.111 kb on + strand, within BWI76_RS27910 at 5789.119 kb on - strand, within BWI76_RS27910 at 5789.119 kb on - strand, within BWI76_RS27910 at 5789.169 kb on - strand at 5789.207 kb on + strand at 5789.225 kb on - strand at 5789.238 kb on - strand at 5789.258 kb on + strand at 5789.258 kb on + strand at 5789.258 kb on + strand at 5789.323 kb on + strand at 5789.325 kb on - strand at 5789.331 kb on - strand at 5789.332 kb on - strand at 5789.332 kb on - strand at 5789.384 kb on + strand at 5789.387 kb on - strand at 5789.596 kb on - strand at 5789.600 kb on + strand at 5789.600 kb on + strand at 5789.747 kb on + strand, within BWI76_RS27915 at 5789.774 kb on - strand, within BWI76_RS27915 at 5789.819 kb on - strand at 5789.826 kb on + strand, within BWI76_RS27915 at 5789.915 kb on + strand at 5789.962 kb on + strand at 5790.021 kb on - strand at 5790.147 kb on + strand, within BWI76_RS27920 at 5790.175 kb on - strand, within BWI76_RS27920 at 5790.175 kb on - strand, within BWI76_RS27920 at 5790.177 kb on - strand, within BWI76_RS27920
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 5,787,845 - BWI76_RS27900 0.68 -0.3 5,787,854 + BWI76_RS27900 0.69 -0.8 5,787,871 - BWI76_RS27900 0.71 -2.3 5,787,918 - BWI76_RS27900 0.77 +0.8 5,787,924 + BWI76_RS27900 0.78 -0.3 5,787,950 + BWI76_RS27900 0.81 +1.9 5,788,015 + BWI76_RS27900 0.89 -0.3 5,788,042 + -0.8 5,788,050 - -0.5 5,788,180 + +1.1 5,788,399 - BWI76_RS27905 0.36 +1.3 5,788,421 - BWI76_RS27905 0.41 -0.2 5,788,531 - BWI76_RS27905 0.67 -0.7 5,788,531 - BWI76_RS27905 0.67 +0.1 5,788,566 + BWI76_RS27905 0.75 -0.2 5,788,666 - -1.3 5,788,675 + +0.1 5,788,714 - +0.3 5,788,846 + BWI76_RS27910 0.13 -2.9 5,788,850 + BWI76_RS27910 0.14 +0.9 5,788,850 + BWI76_RS27910 0.14 +0.9 5,788,850 + BWI76_RS27910 0.14 +1.1 5,788,850 + BWI76_RS27910 0.14 +0.9 5,788,858 - BWI76_RS27910 0.16 +0.2 5,788,858 - BWI76_RS27910 0.16 -0.2 5,788,858 - BWI76_RS27910 0.16 +1.4 5,788,858 - BWI76_RS27910 0.16 +0.0 5,788,858 - BWI76_RS27910 0.16 +0.8 5,788,858 - BWI76_RS27910 0.16 +0.2 5,788,858 - BWI76_RS27910 0.16 -0.1 5,788,864 + BWI76_RS27910 0.17 +0.8 5,788,940 + BWI76_RS27910 0.36 -3.1 5,788,947 - BWI76_RS27910 0.37 +0.3 5,788,950 + BWI76_RS27910 0.38 +0.6 5,788,951 - BWI76_RS27910 0.38 +2.5 5,788,962 + BWI76_RS27910 0.41 -0.4 5,788,985 + BWI76_RS27910 0.47 -1.7 5,789,000 + BWI76_RS27910 0.50 +0.1 5,789,008 - BWI76_RS27910 0.52 -1.5 5,789,008 - BWI76_RS27910 0.52 -0.5 5,789,063 + BWI76_RS27910 0.65 -0.7 5,789,071 - BWI76_RS27910 0.67 -1.9 5,789,095 + BWI76_RS27910 0.73 +2.6 5,789,095 + BWI76_RS27910 0.73 +1.0 5,789,095 + BWI76_RS27910 0.73 +1.3 5,789,095 + BWI76_RS27910 0.73 +1.3 5,789,111 + BWI76_RS27910 0.77 -2.0 5,789,119 - BWI76_RS27910 0.79 +1.7 5,789,119 - BWI76_RS27910 0.79 +0.6 5,789,169 - +0.1 5,789,207 + +0.2 5,789,225 - +0.7 5,789,238 - -0.0 5,789,258 + -1.7 5,789,258 + +0.3 5,789,258 + +0.3 5,789,323 + -0.8 5,789,325 - +0.1 5,789,331 - -0.2 5,789,332 - -0.6 5,789,332 - -0.9 5,789,384 + +0.7 5,789,387 - -1.0 5,789,596 - -0.5 5,789,600 + -0.4 5,789,600 + +0.9 5,789,747 + BWI76_RS27915 0.52 -0.5 5,789,774 - BWI76_RS27915 0.60 +2.9 5,789,819 - +0.9 5,789,826 + BWI76_RS27915 0.76 -0.1 5,789,915 + +1.2 5,789,962 + -2.9 5,790,021 - -1.2 5,790,147 + BWI76_RS27920 0.20 -0.9 5,790,175 - BWI76_RS27920 0.22 +0.1 5,790,175 - BWI76_RS27920 0.22 +0.8 5,790,177 - BWI76_RS27920 0.22 -1.9
Or see this region's nucleotide sequence