Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24705

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24695 and BWI76_RS24700 are separated by 77 nucleotidesBWI76_RS24700 and BWI76_RS24705 are separated by 69 nucleotidesBWI76_RS24705 and BWI76_RS24710 are separated by 250 nucleotides BWI76_RS24695: BWI76_RS24695 - glycoside hydrolase 43 family protein, at 5,149,330 to 5,150,973 _RS24695 BWI76_RS24700: BWI76_RS24700 - hypothetical protein, at 5,151,051 to 5,151,554 _RS24700 BWI76_RS24705: BWI76_RS24705 - oxidoreductase, at 5,151,624 to 5,152,613 _RS24705 BWI76_RS24710: BWI76_RS24710 - membrane protein, at 5,152,864 to 5,153,832 _RS24710 Position (kb) 5151 5152 5153Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5150.643 kb on + strand, within BWI76_RS24695at 5150.733 kb on - strand, within BWI76_RS24695at 5150.815 kb on + strandat 5150.823 kb on - strandat 5150.823 kb on - strandat 5150.823 kb on - strandat 5151.058 kb on + strandat 5151.321 kb on - strand, within BWI76_RS24700at 5151.549 kb on - strandat 5151.576 kb on + strandat 5151.653 kb on + strandat 5151.738 kb on + strand, within BWI76_RS24705at 5151.773 kb on + strand, within BWI76_RS24705at 5151.805 kb on + strand, within BWI76_RS24705at 5151.913 kb on + strand, within BWI76_RS24705at 5151.926 kb on - strand, within BWI76_RS24705at 5151.981 kb on - strand, within BWI76_RS24705at 5152.049 kb on + strand, within BWI76_RS24705at 5152.215 kb on + strand, within BWI76_RS24705at 5152.223 kb on - strand, within BWI76_RS24705at 5152.269 kb on + strand, within BWI76_RS24705at 5152.284 kb on + strand, within BWI76_RS24705at 5152.296 kb on + strand, within BWI76_RS24705at 5152.304 kb on - strand, within BWI76_RS24705at 5152.453 kb on + strand, within BWI76_RS24705at 5152.453 kb on + strand, within BWI76_RS24705at 5152.461 kb on - strand, within BWI76_RS24705at 5152.463 kb on + strand, within BWI76_RS24705at 5152.616 kb on - strandat 5152.616 kb on - strandat 5152.616 kb on - strandat 5152.917 kb on - strandat 5152.942 kb on - strandat 5152.975 kb on - strand, within BWI76_RS24710at 5153.196 kb on - strand, within BWI76_RS24710at 5153.460 kb on + strand, within BWI76_RS24710at 5153.461 kb on + strand, within BWI76_RS24710at 5153.521 kb on + strand, within BWI76_RS24710at 5153.587 kb on - strand, within BWI76_RS24710

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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5,150,643 + BWI76_RS24695 0.80 +0.1
5,150,733 - BWI76_RS24695 0.85 +0.8
5,150,815 + -1.3
5,150,823 - -1.2
5,150,823 - +2.1
5,150,823 - +0.7
5,151,058 + +0.9
5,151,321 - BWI76_RS24700 0.54 -2.3
5,151,549 - +0.9
5,151,576 + -1.4
5,151,653 + +0.4
5,151,738 + BWI76_RS24705 0.12 +0.6
5,151,773 + BWI76_RS24705 0.15 +1.5
5,151,805 + BWI76_RS24705 0.18 +1.8
5,151,913 + BWI76_RS24705 0.29 +0.5
5,151,926 - BWI76_RS24705 0.31 -0.4
5,151,981 - BWI76_RS24705 0.36 +0.8
5,152,049 + BWI76_RS24705 0.43 +0.6
5,152,215 + BWI76_RS24705 0.60 -1.2
5,152,223 - BWI76_RS24705 0.61 +1.0
5,152,269 + BWI76_RS24705 0.65 -0.1
5,152,284 + BWI76_RS24705 0.67 +1.3
5,152,296 + BWI76_RS24705 0.68 +1.5
5,152,304 - BWI76_RS24705 0.69 +1.3
5,152,453 + BWI76_RS24705 0.84 -1.3
5,152,453 + BWI76_RS24705 0.84 -3.5
5,152,461 - BWI76_RS24705 0.85 -0.5
5,152,463 + BWI76_RS24705 0.85 +0.4
5,152,616 - -2.6
5,152,616 - -1.6
5,152,616 - +0.5
5,152,917 - +1.8
5,152,942 - -1.8
5,152,975 - BWI76_RS24710 0.11 +0.0
5,153,196 - BWI76_RS24710 0.34 -0.8
5,153,460 + BWI76_RS24710 0.62 -0.7
5,153,461 + BWI76_RS24710 0.62 -0.6
5,153,521 + BWI76_RS24710 0.68 -1.8
5,153,587 - BWI76_RS24710 0.75 -0.2

Or see this region's nucleotide sequence