Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23700 and BWI76_RS23705 are separated by 2 nucleotides BWI76_RS23705 and BWI76_RS23710 are separated by 11 nucleotides BWI76_RS23710 and BWI76_RS23715 are separated by 135 nucleotides
BWI76_RS23700: BWI76_RS23700 - glycerate CoA-transferase (from data) , at 4,946,698 to 4,948,299
_RS23700
BWI76_RS23705: BWI76_RS23705 - 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) , at 4,948,302 to 4,949,036
_RS23705
BWI76_RS23710: BWI76_RS23710 - 3-keto-2-deoxy-D-ribonyl-CoA thiolase (from data) , at 4,949,048 to 4,950,238
_RS23710
BWI76_RS23715: BWI76_RS23715 - 2-deoxy-D-ribonate transporter 1 (from data) , at 4,950,374 to 4,951,711
_RS23715
Position (kb)
4949
4950
4951 Strain fitness (log2 ratio)
-2
-1
0
1 at 4948.120 kb on + strand, within BWI76_RS23700 at 4948.368 kb on - strand at 4948.502 kb on + strand, within BWI76_RS23705 at 4948.657 kb on + strand, within BWI76_RS23705 at 4949.140 kb on + strand at 4949.173 kb on - strand, within BWI76_RS23710 at 4949.429 kb on - strand, within BWI76_RS23710 at 4949.480 kb on + strand, within BWI76_RS23710 at 4949.754 kb on - strand, within BWI76_RS23710 at 4949.876 kb on + strand, within BWI76_RS23710 at 4950.029 kb on + strand, within BWI76_RS23710 at 4950.593 kb on + strand, within BWI76_RS23715 at 4950.593 kb on + strand, within BWI76_RS23715 at 4950.601 kb on - strand, within BWI76_RS23715 at 4950.601 kb on - strand, within BWI76_RS23715 at 4950.640 kb on + strand, within BWI76_RS23715 at 4950.640 kb on + strand, within BWI76_RS23715 at 4950.645 kb on + strand, within BWI76_RS23715 at 4951.044 kb on - strand, within BWI76_RS23715 at 4951.165 kb on - strand, within BWI76_RS23715
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 4,948,120 + BWI76_RS23700 0.89 -0.1 4,948,368 - -1.9 4,948,502 + BWI76_RS23705 0.27 -1.2 4,948,657 + BWI76_RS23705 0.48 -0.4 4,949,140 + +0.3 4,949,173 - BWI76_RS23710 0.10 +1.1 4,949,429 - BWI76_RS23710 0.32 +0.9 4,949,480 + BWI76_RS23710 0.36 +1.0 4,949,754 - BWI76_RS23710 0.59 -0.3 4,949,876 + BWI76_RS23710 0.70 -2.7 4,950,029 + BWI76_RS23710 0.82 -1.0 4,950,593 + BWI76_RS23715 0.16 -2.7 4,950,593 + BWI76_RS23715 0.16 -2.2 4,950,601 - BWI76_RS23715 0.17 -0.6 4,950,601 - BWI76_RS23715 0.17 +0.3 4,950,640 + BWI76_RS23715 0.20 -0.5 4,950,640 + BWI76_RS23715 0.20 +0.3 4,950,645 + BWI76_RS23715 0.20 -1.0 4,951,044 - BWI76_RS23715 0.50 +0.0 4,951,165 - BWI76_RS23715 0.59 -0.4
Or see this region's nucleotide sequence