Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23620 and BWI76_RS23625 overlap by 4 nucleotides BWI76_RS23625 and BWI76_RS23630 are separated by 166 nucleotides BWI76_RS23630 and BWI76_RS23635 are separated by 40 nucleotides
BWI76_RS23620: BWI76_RS23620 - multidrug resistance transporter, at 4,925,232 to 4,926,710
_RS23620
BWI76_RS23625: BWI76_RS23625 - helix-turn-helix transcriptional regulator, at 4,926,707 to 4,929,418
_RS23625
BWI76_RS23630: BWI76_RS23630 - acetoin(diacetyl) reductase, at 4,929,585 to 4,930,364
_RS23630
BWI76_RS23635: BWI76_RS23635 - MFS transporter, at 4,930,405 to 4,931,958
_RS23635
Position (kb) 4926
4927
4928
4929
4930 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4925.802 kb on - strand, within BWI76_RS23620 at 4925.833 kb on - strand, within BWI76_RS23620 at 4925.894 kb on - strand, within BWI76_RS23620 at 4925.900 kb on + strand, within BWI76_RS23620 at 4925.901 kb on - strand, within BWI76_RS23620 at 4926.115 kb on + strand, within BWI76_RS23620 at 4926.115 kb on + strand, within BWI76_RS23620 at 4926.285 kb on - strand, within BWI76_RS23620 at 4926.392 kb on + strand, within BWI76_RS23620 at 4926.637 kb on + strand at 4926.694 kb on - strand at 4926.841 kb on + strand at 4927.036 kb on + strand, within BWI76_RS23625 at 4927.176 kb on + strand, within BWI76_RS23625 at 4927.191 kb on - strand, within BWI76_RS23625 at 4927.229 kb on - strand, within BWI76_RS23625 at 4927.540 kb on + strand, within BWI76_RS23625 at 4927.614 kb on - strand, within BWI76_RS23625 at 4927.647 kb on - strand, within BWI76_RS23625 at 4927.688 kb on - strand, within BWI76_RS23625 at 4927.722 kb on + strand, within BWI76_RS23625 at 4927.742 kb on + strand at 4928.010 kb on - strand, within BWI76_RS23625 at 4928.291 kb on - strand, within BWI76_RS23625 at 4928.469 kb on + strand, within BWI76_RS23625 at 4928.514 kb on - strand, within BWI76_RS23625 at 4928.514 kb on - strand, within BWI76_RS23625 at 4928.514 kb on - strand, within BWI76_RS23625 at 4928.542 kb on + strand, within BWI76_RS23625 at 4928.587 kb on + strand, within BWI76_RS23625 at 4928.777 kb on + strand, within BWI76_RS23625 at 4928.786 kb on + strand, within BWI76_RS23625 at 4928.833 kb on - strand, within BWI76_RS23625 at 4928.838 kb on - strand, within BWI76_RS23625 at 4928.839 kb on - strand, within BWI76_RS23625 at 4929.058 kb on + strand, within BWI76_RS23625 at 4929.166 kb on + strand at 4929.235 kb on + strand at 4929.356 kb on + strand at 4929.431 kb on + strand at 4929.439 kb on - strand at 4929.574 kb on - strand at 4929.624 kb on + strand at 4929.788 kb on + strand, within BWI76_RS23630 at 4929.788 kb on + strand, within BWI76_RS23630 at 4929.788 kb on + strand, within BWI76_RS23630 at 4929.829 kb on + strand, within BWI76_RS23630 at 4930.286 kb on - strand, within BWI76_RS23630
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 4,925,802 - BWI76_RS23620 0.39 +0.0 4,925,833 - BWI76_RS23620 0.41 -1.5 4,925,894 - BWI76_RS23620 0.45 -1.2 4,925,900 + BWI76_RS23620 0.45 -0.4 4,925,901 - BWI76_RS23620 0.45 -1.8 4,926,115 + BWI76_RS23620 0.60 -2.2 4,926,115 + BWI76_RS23620 0.60 -0.1 4,926,285 - BWI76_RS23620 0.71 -1.5 4,926,392 + BWI76_RS23620 0.78 -0.0 4,926,637 + +0.8 4,926,694 - -0.6 4,926,841 + -4.3 4,927,036 + BWI76_RS23625 0.12 -2.2 4,927,176 + BWI76_RS23625 0.17 +0.7 4,927,191 - BWI76_RS23625 0.18 -0.3 4,927,229 - BWI76_RS23625 0.19 -0.4 4,927,540 + BWI76_RS23625 0.31 -0.6 4,927,614 - BWI76_RS23625 0.33 +0.1 4,927,647 - BWI76_RS23625 0.35 -1.7 4,927,688 - BWI76_RS23625 0.36 -3.3 4,927,722 + BWI76_RS23625 0.37 -3.2 4,927,742 + -0.2 4,928,010 - BWI76_RS23625 0.48 -1.0 4,928,291 - BWI76_RS23625 0.58 -1.7 4,928,469 + BWI76_RS23625 0.65 -1.9 4,928,514 - BWI76_RS23625 0.67 +0.9 4,928,514 - BWI76_RS23625 0.67 +1.2 4,928,514 - BWI76_RS23625 0.67 +0.3 4,928,542 + BWI76_RS23625 0.68 -0.2 4,928,587 + BWI76_RS23625 0.69 -0.3 4,928,777 + BWI76_RS23625 0.76 -1.3 4,928,786 + BWI76_RS23625 0.77 +0.1 4,928,833 - BWI76_RS23625 0.78 -0.1 4,928,838 - BWI76_RS23625 0.79 +0.2 4,928,839 - BWI76_RS23625 0.79 -0.5 4,929,058 + BWI76_RS23625 0.87 -0.9 4,929,166 + +1.8 4,929,235 + -2.0 4,929,356 + -1.9 4,929,431 + -0.9 4,929,439 - -0.3 4,929,574 - +0.2 4,929,624 + -0.0 4,929,788 + BWI76_RS23630 0.26 -2.6 4,929,788 + BWI76_RS23630 0.26 +0.1 4,929,788 + BWI76_RS23630 0.26 -0.2 4,929,829 + BWI76_RS23630 0.31 -0.0 4,930,286 - BWI76_RS23630 0.90 +0.5
Or see this region's nucleotide sequence