Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21005 and BWI76_RS21010 are separated by 370 nucleotides BWI76_RS21010 and BWI76_RS21015 are separated by 16 nucleotides
BWI76_RS21005: BWI76_RS21005 - sensor domain-containing phosphodiesterase, at 4,393,894 to 4,396,116
_RS21005
BWI76_RS21010: BWI76_RS21010 - Negative regulator of nickel and cobalt uptake (YfgG) (from data) , at 4,396,487 to 4,396,678
_RS21010
BWI76_RS21015: BWI76_RS21015 - LysR family transcriptional regulator, at 4,396,695 to 4,397,582
_RS21015
Position (kb)
4396
4397 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 4395.592 kb on - strand, within BWI76_RS21005 at 4395.596 kb on + strand, within BWI76_RS21005 at 4395.596 kb on + strand at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.604 kb on - strand, within BWI76_RS21005 at 4395.611 kb on - strand, within BWI76_RS21005 at 4395.612 kb on - strand, within BWI76_RS21005 at 4395.614 kb on - strand, within BWI76_RS21005 at 4395.614 kb on - strand, within BWI76_RS21005 at 4395.614 kb on - strand, within BWI76_RS21005 at 4395.630 kb on + strand, within BWI76_RS21005 at 4395.638 kb on - strand, within BWI76_RS21005 at 4395.639 kb on + strand, within BWI76_RS21005 at 4395.647 kb on - strand, within BWI76_RS21005 at 4395.647 kb on - strand, within BWI76_RS21005 at 4395.647 kb on - strand, within BWI76_RS21005 at 4395.649 kb on + strand, within BWI76_RS21005 at 4395.649 kb on + strand, within BWI76_RS21005 at 4395.657 kb on - strand, within BWI76_RS21005 at 4395.662 kb on - strand, within BWI76_RS21005 at 4395.662 kb on - strand, within BWI76_RS21005 at 4395.674 kb on + strand, within BWI76_RS21005 at 4395.674 kb on + strand, within BWI76_RS21005 at 4395.682 kb on - strand, within BWI76_RS21005 at 4395.685 kb on - strand at 4395.707 kb on + strand, within BWI76_RS21005 at 4395.828 kb on - strand, within BWI76_RS21005 at 4395.873 kb on + strand, within BWI76_RS21005 at 4395.873 kb on + strand, within BWI76_RS21005 at 4395.873 kb on + strand, within BWI76_RS21005 at 4395.881 kb on - strand, within BWI76_RS21005 at 4395.881 kb on - strand, within BWI76_RS21005 at 4395.881 kb on - strand, within BWI76_RS21005 at 4395.883 kb on + strand, within BWI76_RS21005 at 4395.885 kb on + strand, within BWI76_RS21005 at 4395.890 kb on + strand, within BWI76_RS21005 at 4395.893 kb on - strand, within BWI76_RS21005 at 4395.898 kb on - strand at 4395.919 kb on + strand at 4395.922 kb on - strand at 4395.945 kb on + strand at 4395.945 kb on + strand at 4395.952 kb on + strand at 4395.957 kb on + strand at 4395.957 kb on + strand at 4395.963 kb on - strand at 4395.964 kb on + strand at 4395.965 kb on - strand at 4395.965 kb on - strand at 4395.969 kb on + strand at 4395.972 kb on - strand at 4395.972 kb on - strand at 4395.984 kb on + strand at 4396.013 kb on - strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.016 kb on + strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.024 kb on - strand at 4396.033 kb on - strand at 4396.038 kb on - strand at 4396.039 kb on + strand at 4396.039 kb on + strand at 4396.047 kb on - strand at 4396.052 kb on + strand at 4396.052 kb on + strand at 4396.052 kb on + strand at 4396.052 kb on + strand at 4396.052 kb on + strand at 4396.060 kb on - strand at 4396.060 kb on - strand at 4396.060 kb on - strand at 4396.060 kb on - strand at 4396.092 kb on + strand at 4396.099 kb on - strand at 4396.099 kb on - strand at 4396.101 kb on - strand at 4396.128 kb on + strand at 4396.131 kb on - strand at 4396.134 kb on + strand at 4396.135 kb on + strand at 4396.142 kb on - strand at 4396.143 kb on - strand at 4396.148 kb on + strand at 4396.148 kb on + strand at 4396.156 kb on - strand at 4396.156 kb on - strand at 4396.156 kb on - strand at 4396.156 kb on - strand at 4396.167 kb on - strand at 4396.173 kb on - strand at 4396.183 kb on - strand at 4396.192 kb on + strand at 4396.192 kb on + strand at 4396.194 kb on + strand at 4396.200 kb on - strand at 4396.200 kb on - strand at 4396.200 kb on - strand at 4396.207 kb on + strand at 4396.210 kb on - strand at 4396.210 kb on - strand at 4396.316 kb on + strand at 4396.317 kb on - strand at 4396.324 kb on - strand at 4396.394 kb on + strand at 4396.394 kb on + strand at 4396.402 kb on - strand at 4396.408 kb on + strand at 4396.408 kb on + strand at 4396.411 kb on - strand at 4396.416 kb on - strand at 4396.418 kb on + strand at 4396.421 kb on - strand at 4396.426 kb on - strand at 4396.426 kb on - strand at 4396.431 kb on - strand at 4396.452 kb on + strand at 4396.460 kb on - strand at 4396.481 kb on + strand at 4396.483 kb on + strand at 4396.489 kb on - strand at 4396.503 kb on + strand at 4396.529 kb on - strand, within BWI76_RS21010 at 4396.542 kb on + strand, within BWI76_RS21010 at 4396.549 kb on - strand at 4396.562 kb on - strand, within BWI76_RS21010 at 4396.568 kb on + strand, within BWI76_RS21010 at 4396.643 kb on - strand, within BWI76_RS21010 at 4396.652 kb on - strand, within BWI76_RS21010 at 4396.861 kb on + strand, within BWI76_RS21015 at 4396.864 kb on - strand, within BWI76_RS21015 at 4396.877 kb on - strand, within BWI76_RS21015 at 4396.908 kb on - strand, within BWI76_RS21015 at 4396.909 kb on - strand, within BWI76_RS21015 at 4396.917 kb on + strand, within BWI76_RS21015 at 4396.947 kb on - strand, within BWI76_RS21015 at 4397.468 kb on + strand, within BWI76_RS21015 at 4397.480 kb on - strand, within BWI76_RS21015 at 4397.627 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 4,395,592 - BWI76_RS21005 0.76 +2.3 4,395,596 + BWI76_RS21005 0.77 +2.5 4,395,596 + +1.8 4,395,604 - BWI76_RS21005 0.77 +1.6 4,395,604 - BWI76_RS21005 0.77 +4.1 4,395,604 - BWI76_RS21005 0.77 -0.4 4,395,604 - BWI76_RS21005 0.77 +2.2 4,395,604 - BWI76_RS21005 0.77 -0.2 4,395,604 - BWI76_RS21005 0.77 +3.3 4,395,604 - BWI76_RS21005 0.77 -0.1 4,395,604 - BWI76_RS21005 0.77 +2.2 4,395,611 - BWI76_RS21005 0.77 +0.6 4,395,612 - BWI76_RS21005 0.77 +1.4 4,395,614 - BWI76_RS21005 0.77 +5.1 4,395,614 - BWI76_RS21005 0.77 +1.1 4,395,614 - BWI76_RS21005 0.77 +2.4 4,395,630 + BWI76_RS21005 0.78 +2.9 4,395,638 - BWI76_RS21005 0.78 +1.7 4,395,639 + BWI76_RS21005 0.78 +1.6 4,395,647 - BWI76_RS21005 0.79 -0.5 4,395,647 - BWI76_RS21005 0.79 -1.3 4,395,647 - BWI76_RS21005 0.79 +1.7 4,395,649 + BWI76_RS21005 0.79 +1.6 4,395,649 + BWI76_RS21005 0.79 +0.4 4,395,657 - BWI76_RS21005 0.79 -0.5 4,395,662 - BWI76_RS21005 0.80 +1.9 4,395,662 - BWI76_RS21005 0.80 -0.7 4,395,674 + BWI76_RS21005 0.80 +1.5 4,395,674 + BWI76_RS21005 0.80 +0.5 4,395,682 - BWI76_RS21005 0.80 +1.9 4,395,685 - +0.8 4,395,707 + BWI76_RS21005 0.82 +2.8 4,395,828 - BWI76_RS21005 0.87 +1.4 4,395,873 + BWI76_RS21005 0.89 +1.5 4,395,873 + BWI76_RS21005 0.89 +1.0 4,395,873 + BWI76_RS21005 0.89 +1.4 4,395,881 - BWI76_RS21005 0.89 +1.8 4,395,881 - BWI76_RS21005 0.89 -2.0 4,395,881 - BWI76_RS21005 0.89 +0.0 4,395,883 + BWI76_RS21005 0.89 -0.2 4,395,885 + BWI76_RS21005 0.90 +2.0 4,395,890 + BWI76_RS21005 0.90 -1.0 4,395,893 - BWI76_RS21005 0.90 +0.6 4,395,898 - +2.6 4,395,919 + +1.4 4,395,922 - +1.7 4,395,945 + -0.4 4,395,945 + -0.5 4,395,952 + +1.3 4,395,957 + +2.1 4,395,957 + +0.8 4,395,963 - +1.5 4,395,964 + +1.2 4,395,965 - +0.8 4,395,965 - +0.5 4,395,969 + -0.9 4,395,972 - +1.2 4,395,972 - +0.0 4,395,984 + -0.9 4,396,013 - -2.1 4,396,016 + +1.2 4,396,016 + +0.2 4,396,016 + +1.1 4,396,016 + +0.5 4,396,016 + +1.9 4,396,016 + +0.9 4,396,016 + +0.1 4,396,016 + +2.0 4,396,016 + +1.1 4,396,016 + +1.7 4,396,016 + +0.5 4,396,016 + +4.8 4,396,024 - +0.7 4,396,024 - +3.6 4,396,024 - +2.8 4,396,024 - +1.5 4,396,024 - -1.7 4,396,024 - +2.5 4,396,024 - +1.6 4,396,024 - +1.9 4,396,024 - +2.3 4,396,024 - +0.8 4,396,024 - +1.1 4,396,024 - +4.3 4,396,024 - +1.9 4,396,024 - -0.8 4,396,024 - +0.2 4,396,024 - +2.2 4,396,024 - +1.9 4,396,033 - +1.0 4,396,038 - +1.1 4,396,039 + +1.0 4,396,039 + +1.3 4,396,047 - +0.1 4,396,052 + +0.5 4,396,052 + +2.8 4,396,052 + +1.6 4,396,052 + +1.1 4,396,052 + +2.8 4,396,060 - +2.8 4,396,060 - +1.5 4,396,060 - +4.3 4,396,060 - -1.4 4,396,092 + +2.0 4,396,099 - +1.0 4,396,099 - +1.8 4,396,101 - +1.2 4,396,128 + +1.8 4,396,131 - +3.3 4,396,134 + +1.4 4,396,135 + -0.8 4,396,142 - -1.8 4,396,143 - -1.2 4,396,148 + -2.2 4,396,148 + -1.7 4,396,156 - +2.5 4,396,156 - +1.2 4,396,156 - +0.6 4,396,156 - +1.2 4,396,167 - +1.9 4,396,173 - +1.7 4,396,183 - +0.8 4,396,192 + +1.1 4,396,192 + +2.3 4,396,194 + +0.2 4,396,200 - +1.9 4,396,200 - +1.8 4,396,200 - +2.2 4,396,207 + +3.6 4,396,210 - +1.2 4,396,210 - +1.9 4,396,316 + +3.3 4,396,317 - +1.3 4,396,324 - +4.0 4,396,394 + +3.2 4,396,394 + +0.6 4,396,402 - +3.7 4,396,408 + -0.2 4,396,408 + -1.8 4,396,411 - +0.2 4,396,416 - -4.1 4,396,418 + +1.2 4,396,421 - -1.8 4,396,426 - -2.7 4,396,426 - +0.8 4,396,431 - +1.2 4,396,452 + +0.5 4,396,460 - -3.2 4,396,481 + -3.3 4,396,483 + -2.6 4,396,489 - -0.7 4,396,503 + -1.3 4,396,529 - BWI76_RS21010 0.22 -2.3 4,396,542 + BWI76_RS21010 0.29 -1.1 4,396,549 - +0.0 4,396,562 - BWI76_RS21010 0.39 -0.5 4,396,568 + BWI76_RS21010 0.42 -2.1 4,396,643 - BWI76_RS21010 0.81 -2.3 4,396,652 - BWI76_RS21010 0.86 -3.3 4,396,861 + BWI76_RS21015 0.19 +0.5 4,396,864 - BWI76_RS21015 0.19 -0.3 4,396,877 - BWI76_RS21015 0.20 +2.5 4,396,908 - BWI76_RS21015 0.24 -1.4 4,396,909 - BWI76_RS21015 0.24 -0.1 4,396,917 + BWI76_RS21015 0.25 -1.6 4,396,947 - BWI76_RS21015 0.28 +0.5 4,397,468 + BWI76_RS21015 0.87 -2.8 4,397,480 - BWI76_RS21015 0.88 +0.6 4,397,627 + +0.1
Or see this region's nucleotide sequence