Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20985

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS20980 and BWI76_RS20985 overlap by 26 nucleotidesBWI76_RS20985 and BWI76_RS20990 are separated by 3 nucleotides BWI76_RS20980: BWI76_RS20980 - MFS transporter, at 4,385,870 to 4,387,324 _RS20980 BWI76_RS20985: BWI76_RS20985 - glycosyl hydrolase family protein, at 4,387,299 to 4,388,396 _RS20985 BWI76_RS20990: BWI76_RS20990 - hypothetical protein, at 4,388,400 to 4,390,073 _RS20990 Position (kb) 4387 4388 4389Strain fitness (log2 ratio) -2 -1 0 1 2at 4386.369 kb on - strand, within BWI76_RS20980at 4386.374 kb on + strand, within BWI76_RS20980at 4386.393 kb on - strand, within BWI76_RS20980at 4386.408 kb on + strand, within BWI76_RS20980at 4386.555 kb on + strand, within BWI76_RS20980at 4386.624 kb on - strand, within BWI76_RS20980at 4386.893 kb on + strand, within BWI76_RS20980at 4387.087 kb on - strand, within BWI76_RS20980at 4387.127 kb on + strand, within BWI76_RS20980at 4387.226 kb on - strandat 4387.486 kb on + strand, within BWI76_RS20985at 4387.486 kb on + strand, within BWI76_RS20985at 4387.494 kb on - strand, within BWI76_RS20985at 4387.650 kb on + strand, within BWI76_RS20985at 4387.797 kb on - strand, within BWI76_RS20985at 4387.965 kb on - strand, within BWI76_RS20985at 4388.299 kb on + strandat 4388.376 kb on + strandat 4388.384 kb on - strandat 4388.384 kb on - strandat 4388.643 kb on - strand, within BWI76_RS20990at 4388.645 kb on + strand, within BWI76_RS20990at 4388.841 kb on + strand, within BWI76_RS20990at 4388.843 kb on - strand, within BWI76_RS20990at 4389.159 kb on - strand, within BWI76_RS20990at 4389.189 kb on - strand, within BWI76_RS20990at 4389.225 kb on + strand, within BWI76_RS20990at 4389.326 kb on + strand, within BWI76_RS20990at 4389.339 kb on - strand, within BWI76_RS20990at 4389.339 kb on - strand, within BWI76_RS20990

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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4,386,369 - BWI76_RS20980 0.34 -0.9
4,386,374 + BWI76_RS20980 0.35 +1.2
4,386,393 - BWI76_RS20980 0.36 +0.4
4,386,408 + BWI76_RS20980 0.37 -2.7
4,386,555 + BWI76_RS20980 0.47 -0.8
4,386,624 - BWI76_RS20980 0.52 +0.4
4,386,893 + BWI76_RS20980 0.70 +0.9
4,387,087 - BWI76_RS20980 0.84 +0.9
4,387,127 + BWI76_RS20980 0.86 -1.6
4,387,226 - -0.2
4,387,486 + BWI76_RS20985 0.17 +0.2
4,387,486 + BWI76_RS20985 0.17 -2.2
4,387,494 - BWI76_RS20985 0.18 -0.9
4,387,650 + BWI76_RS20985 0.32 +0.1
4,387,797 - BWI76_RS20985 0.45 -2.0
4,387,965 - BWI76_RS20985 0.61 -0.4
4,388,299 + +0.1
4,388,376 + -0.1
4,388,384 - +0.3
4,388,384 - -2.2
4,388,643 - BWI76_RS20990 0.15 -0.5
4,388,645 + BWI76_RS20990 0.15 -2.7
4,388,841 + BWI76_RS20990 0.26 -1.1
4,388,843 - BWI76_RS20990 0.26 +0.4
4,389,159 - BWI76_RS20990 0.45 -0.5
4,389,189 - BWI76_RS20990 0.47 +2.0
4,389,225 + BWI76_RS20990 0.49 -0.3
4,389,326 + BWI76_RS20990 0.55 -0.3
4,389,339 - BWI76_RS20990 0.56 -0.1
4,389,339 - BWI76_RS20990 0.56 -0.7

Or see this region's nucleotide sequence