Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20980 and BWI76_RS20985 overlap by 26 nucleotides BWI76_RS20985 and BWI76_RS20990 are separated by 3 nucleotides
BWI76_RS20980: BWI76_RS20980 - MFS transporter, at 4,385,870 to 4,387,324
_RS20980
BWI76_RS20985: BWI76_RS20985 - glycosyl hydrolase family protein, at 4,387,299 to 4,388,396
_RS20985
BWI76_RS20990: BWI76_RS20990 - hypothetical protein, at 4,388,400 to 4,390,073
_RS20990
Position (kb)
4387
4388
4389 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4386.369 kb on - strand, within BWI76_RS20980 at 4386.374 kb on + strand, within BWI76_RS20980 at 4386.393 kb on - strand, within BWI76_RS20980 at 4386.408 kb on + strand, within BWI76_RS20980 at 4386.555 kb on + strand, within BWI76_RS20980 at 4386.624 kb on - strand, within BWI76_RS20980 at 4386.893 kb on + strand, within BWI76_RS20980 at 4387.087 kb on - strand, within BWI76_RS20980 at 4387.127 kb on + strand, within BWI76_RS20980 at 4387.226 kb on - strand at 4387.486 kb on + strand, within BWI76_RS20985 at 4387.486 kb on + strand, within BWI76_RS20985 at 4387.494 kb on - strand, within BWI76_RS20985 at 4387.650 kb on + strand, within BWI76_RS20985 at 4387.797 kb on - strand, within BWI76_RS20985 at 4387.965 kb on - strand, within BWI76_RS20985 at 4388.299 kb on + strand at 4388.376 kb on + strand at 4388.384 kb on - strand at 4388.384 kb on - strand at 4388.643 kb on - strand, within BWI76_RS20990 at 4388.645 kb on + strand, within BWI76_RS20990 at 4388.841 kb on + strand, within BWI76_RS20990 at 4388.843 kb on - strand, within BWI76_RS20990 at 4389.159 kb on - strand, within BWI76_RS20990 at 4389.189 kb on - strand, within BWI76_RS20990 at 4389.225 kb on + strand, within BWI76_RS20990 at 4389.326 kb on + strand, within BWI76_RS20990 at 4389.339 kb on - strand, within BWI76_RS20990 at 4389.339 kb on - strand, within BWI76_RS20990
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 4,386,369 - BWI76_RS20980 0.34 -0.9 4,386,374 + BWI76_RS20980 0.35 +1.2 4,386,393 - BWI76_RS20980 0.36 +0.4 4,386,408 + BWI76_RS20980 0.37 -2.7 4,386,555 + BWI76_RS20980 0.47 -0.8 4,386,624 - BWI76_RS20980 0.52 +0.4 4,386,893 + BWI76_RS20980 0.70 +0.9 4,387,087 - BWI76_RS20980 0.84 +0.9 4,387,127 + BWI76_RS20980 0.86 -1.6 4,387,226 - -0.2 4,387,486 + BWI76_RS20985 0.17 +0.2 4,387,486 + BWI76_RS20985 0.17 -2.2 4,387,494 - BWI76_RS20985 0.18 -0.9 4,387,650 + BWI76_RS20985 0.32 +0.1 4,387,797 - BWI76_RS20985 0.45 -2.0 4,387,965 - BWI76_RS20985 0.61 -0.4 4,388,299 + +0.1 4,388,376 + -0.1 4,388,384 - +0.3 4,388,384 - -2.2 4,388,643 - BWI76_RS20990 0.15 -0.5 4,388,645 + BWI76_RS20990 0.15 -2.7 4,388,841 + BWI76_RS20990 0.26 -1.1 4,388,843 - BWI76_RS20990 0.26 +0.4 4,389,159 - BWI76_RS20990 0.45 -0.5 4,389,189 - BWI76_RS20990 0.47 +2.0 4,389,225 + BWI76_RS20990 0.49 -0.3 4,389,326 + BWI76_RS20990 0.55 -0.3 4,389,339 - BWI76_RS20990 0.56 -0.1 4,389,339 - BWI76_RS20990 0.56 -0.7
Or see this region's nucleotide sequence