Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20385 and BWI76_RS20390 are separated by 62 nucleotides BWI76_RS20390 and BWI76_RS20395 are separated by 110 nucleotides
BWI76_RS20385: BWI76_RS20385 - aspartate-semialdehyde dehydrogenase, at 4,266,706 to 4,267,719
_RS20385
BWI76_RS20390: BWI76_RS20390 - erythronate-4-phosphate dehydrogenase, at 4,267,782 to 4,268,918
_RS20390
BWI76_RS20395: BWI76_RS20395 - flagella biosynthesis regulator, at 4,269,029 to 4,269,988
_RS20395
Position (kb)
4267
4268
4269 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4266.788 kb on + strand at 4266.793 kb on + strand at 4266.921 kb on + strand, within BWI76_RS20385 at 4266.974 kb on - strand, within BWI76_RS20385 at 4267.035 kb on - strand, within BWI76_RS20385 at 4267.590 kb on - strand, within BWI76_RS20385 at 4267.854 kb on - strand at 4268.307 kb on + strand, within BWI76_RS20390 at 4268.380 kb on + strand, within BWI76_RS20390 at 4268.541 kb on - strand, within BWI76_RS20390 at 4268.862 kb on - strand at 4268.920 kb on + strand at 4268.928 kb on - strand at 4268.929 kb on - strand at 4269.020 kb on + strand at 4269.086 kb on - strand at 4269.090 kb on + strand at 4269.093 kb on - strand at 4269.145 kb on - strand, within BWI76_RS20395 at 4269.174 kb on + strand, within BWI76_RS20395 at 4269.236 kb on + strand, within BWI76_RS20395 at 4269.419 kb on + strand, within BWI76_RS20395 at 4269.516 kb on - strand, within BWI76_RS20395 at 4269.722 kb on - strand, within BWI76_RS20395
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 4,266,788 + -0.2 4,266,793 + -1.3 4,266,921 + BWI76_RS20385 0.21 -0.7 4,266,974 - BWI76_RS20385 0.26 -0.3 4,267,035 - BWI76_RS20385 0.32 -0.2 4,267,590 - BWI76_RS20385 0.87 +1.1 4,267,854 - +0.5 4,268,307 + BWI76_RS20390 0.46 -1.7 4,268,380 + BWI76_RS20390 0.53 -1.6 4,268,541 - BWI76_RS20390 0.67 -1.9 4,268,862 - +1.5 4,268,920 + -0.7 4,268,928 - +1.3 4,268,929 - +0.1 4,269,020 + -1.2 4,269,086 - +0.1 4,269,090 + -0.8 4,269,093 - +1.0 4,269,145 - BWI76_RS20395 0.12 +0.5 4,269,174 + BWI76_RS20395 0.15 +0.1 4,269,236 + BWI76_RS20395 0.22 +0.6 4,269,419 + BWI76_RS20395 0.41 +1.5 4,269,516 - BWI76_RS20395 0.51 +2.4 4,269,722 - BWI76_RS20395 0.72 +0.5
Or see this region's nucleotide sequence