Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19110 and BWI76_RS19115 are separated by 244 nucleotides BWI76_RS19115 and BWI76_RS19120 are separated by 27 nucleotides BWI76_RS19120 and BWI76_RS19125 are separated by 90 nucleotides
BWI76_RS19110: BWI76_RS19110 - hypothetical protein, at 3,971,838 to 3,973,424
_RS19110
BWI76_RS19115: BWI76_RS19115 - outer membrane assembly protein AsmA, at 3,973,669 to 3,975,516
_RS19115
BWI76_RS19120: BWI76_RS19120 - dCTP deaminase, at 3,975,544 to 3,976,125
_RS19120
BWI76_RS19125: BWI76_RS19125 - uridine kinase, at 3,976,216 to 3,976,857
_RS19125
Position (kb)
3973
3974
3975
3976 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3972.708 kb on + strand, within BWI76_RS19110 at 3973.311 kb on - strand at 3973.518 kb on - strand at 3973.571 kb on - strand at 3973.571 kb on - strand at 3973.799 kb on - strand at 3973.992 kb on + strand, within BWI76_RS19115 at 3973.997 kb on + strand, within BWI76_RS19115 at 3974.041 kb on + strand, within BWI76_RS19115 at 3974.049 kb on - strand, within BWI76_RS19115 at 3974.084 kb on - strand, within BWI76_RS19115 at 3974.572 kb on - strand, within BWI76_RS19115 at 3974.696 kb on + strand, within BWI76_RS19115 at 3974.715 kb on + strand, within BWI76_RS19115 at 3974.717 kb on + strand, within BWI76_RS19115 at 3974.988 kb on - strand, within BWI76_RS19115 at 3975.669 kb on + strand, within BWI76_RS19120
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 3,972,708 + BWI76_RS19110 0.55 +1.2 3,973,311 - +1.1 3,973,518 - +0.3 3,973,571 - -1.8 3,973,571 - -0.1 3,973,799 - +0.6 3,973,992 + BWI76_RS19115 0.17 +0.4 3,973,997 + BWI76_RS19115 0.18 -2.4 3,974,041 + BWI76_RS19115 0.20 -3.9 3,974,049 - BWI76_RS19115 0.21 -3.2 3,974,084 - BWI76_RS19115 0.22 -1.5 3,974,572 - BWI76_RS19115 0.49 -0.8 3,974,696 + BWI76_RS19115 0.56 -1.0 3,974,715 + BWI76_RS19115 0.57 -0.8 3,974,717 + BWI76_RS19115 0.57 -3.4 3,974,988 - BWI76_RS19115 0.71 -1.1 3,975,669 + BWI76_RS19120 0.21 -1.4
Or see this region's nucleotide sequence