Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13270

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13260 and BWI76_RS13265 are separated by 51 nucleotidesBWI76_RS13265 and BWI76_RS13270 are separated by 173 nucleotidesBWI76_RS13270 and BWI76_RS13275 are separated by 38 nucleotidesBWI76_RS13275 and BWI76_RS13280 are separated by 68 nucleotides BWI76_RS13260: BWI76_RS13260 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 2,764,618 to 2,765,736 _RS13260 BWI76_RS13265: BWI76_RS13265 - hypothetical protein, at 2,765,788 to 2,766,066 _RS13265 BWI76_RS13270: BWI76_RS13270 - membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family, at 2,766,240 to 2,768,612 _RS13270 BWI76_RS13275: BWI76_RS13275 - hypothetical protein, at 2,768,651 to 2,768,836 _RS13275 BWI76_RS13280: BWI76_RS13280 - LysR family transcriptional regulator, at 2,768,905 to 2,769,828 _RS13280 Position (kb) 2766 2767 2768 2769Strain fitness (log2 ratio) -2 -1 0 1 2at 2765.249 kb on - strand, within BWI76_RS13260at 2765.256 kb on - strand, within BWI76_RS13260at 2765.340 kb on + strand, within BWI76_RS13260at 2765.572 kb on + strand, within BWI76_RS13260at 2765.654 kb on - strandat 2765.840 kb on - strand, within BWI76_RS13265at 2765.883 kb on - strand, within BWI76_RS13265at 2765.883 kb on - strand, within BWI76_RS13265at 2765.998 kb on + strand, within BWI76_RS13265at 2767.015 kb on + strand, within BWI76_RS13270at 2767.023 kb on - strand, within BWI76_RS13270at 2767.133 kb on + strand, within BWI76_RS13270at 2767.297 kb on + strand, within BWI76_RS13270at 2767.655 kb on + strand, within BWI76_RS13270at 2767.984 kb on - strand, within BWI76_RS13270at 2768.034 kb on - strand, within BWI76_RS13270at 2768.044 kb on - strand, within BWI76_RS13270at 2768.068 kb on - strand, within BWI76_RS13270at 2768.281 kb on + strand, within BWI76_RS13270at 2768.573 kb on - strandat 2768.763 kb on + strand, within BWI76_RS13275at 2769.007 kb on - strand, within BWI76_RS13280at 2769.080 kb on - strand, within BWI76_RS13280at 2769.505 kb on - strand, within BWI76_RS13280at 2769.507 kb on - strand, within BWI76_RS13280at 2769.574 kb on - strand, within BWI76_RS13280at 2769.577 kb on - strand, within BWI76_RS13280

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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2,765,249 - BWI76_RS13260 0.56 -0.9
2,765,256 - BWI76_RS13260 0.57 -1.9
2,765,340 + BWI76_RS13260 0.65 +0.4
2,765,572 + BWI76_RS13260 0.85 +1.6
2,765,654 - +1.0
2,765,840 - BWI76_RS13265 0.19 +2.5
2,765,883 - BWI76_RS13265 0.34 -0.5
2,765,883 - BWI76_RS13265 0.34 +0.6
2,765,998 + BWI76_RS13265 0.75 +1.2
2,767,015 + BWI76_RS13270 0.33 +0.2
2,767,023 - BWI76_RS13270 0.33 -0.5
2,767,133 + BWI76_RS13270 0.38 -0.3
2,767,297 + BWI76_RS13270 0.45 -1.4
2,767,655 + BWI76_RS13270 0.60 -0.1
2,767,984 - BWI76_RS13270 0.73 +0.0
2,768,034 - BWI76_RS13270 0.76 -0.2
2,768,044 - BWI76_RS13270 0.76 -0.1
2,768,068 - BWI76_RS13270 0.77 +1.6
2,768,281 + BWI76_RS13270 0.86 +1.6
2,768,573 - +1.1
2,768,763 + BWI76_RS13275 0.60 +0.1
2,769,007 - BWI76_RS13280 0.11 -0.4
2,769,080 - BWI76_RS13280 0.19 +0.8
2,769,505 - BWI76_RS13280 0.65 -0.2
2,769,507 - BWI76_RS13280 0.65 +0.2
2,769,574 - BWI76_RS13280 0.72 -0.6
2,769,577 - BWI76_RS13280 0.73 +0.1

Or see this region's nucleotide sequence