Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13265

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13260 and BWI76_RS13265 are separated by 51 nucleotidesBWI76_RS13265 and BWI76_RS13270 are separated by 173 nucleotides BWI76_RS13260: BWI76_RS13260 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 2,764,618 to 2,765,736 _RS13260 BWI76_RS13265: BWI76_RS13265 - hypothetical protein, at 2,765,788 to 2,766,066 _RS13265 BWI76_RS13270: BWI76_RS13270 - membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family, at 2,766,240 to 2,768,612 _RS13270 Position (kb) 2765 2766 2767Strain fitness (log2 ratio) -2 -1 0 1 2at 2764.792 kb on + strand, within BWI76_RS13260at 2765.157 kb on - strand, within BWI76_RS13260at 2765.162 kb on - strand, within BWI76_RS13260at 2765.249 kb on - strand, within BWI76_RS13260at 2765.256 kb on - strand, within BWI76_RS13260at 2765.340 kb on + strand, within BWI76_RS13260at 2765.572 kb on + strand, within BWI76_RS13260at 2765.654 kb on - strandat 2765.840 kb on - strand, within BWI76_RS13265at 2765.883 kb on - strand, within BWI76_RS13265at 2765.883 kb on - strand, within BWI76_RS13265at 2765.998 kb on + strand, within BWI76_RS13265at 2767.015 kb on + strand, within BWI76_RS13270at 2767.023 kb on - strand, within BWI76_RS13270

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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2,764,792 + BWI76_RS13260 0.16 -0.1
2,765,157 - BWI76_RS13260 0.48 -0.3
2,765,162 - BWI76_RS13260 0.49 +2.1
2,765,249 - BWI76_RS13260 0.56 -0.9
2,765,256 - BWI76_RS13260 0.57 -1.9
2,765,340 + BWI76_RS13260 0.65 +0.4
2,765,572 + BWI76_RS13260 0.85 +1.6
2,765,654 - +1.0
2,765,840 - BWI76_RS13265 0.19 +2.5
2,765,883 - BWI76_RS13265 0.34 -0.5
2,765,883 - BWI76_RS13265 0.34 +0.6
2,765,998 + BWI76_RS13265 0.75 +1.2
2,767,015 + BWI76_RS13270 0.33 +0.2
2,767,023 - BWI76_RS13270 0.33 -0.5

Or see this region's nucleotide sequence