Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12975

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS12970 and BWI76_RS12975 are separated by 54 nucleotidesBWI76_RS12975 and BWI76_RS12980 are separated by 78 nucleotides BWI76_RS12970: BWI76_RS12970 - MFS transporter, at 2,703,762 to 2,705,198 _RS12970 BWI76_RS12975: BWI76_RS12975 - type I glyceraldehyde-3-phosphate dehydrogenase, at 2,705,253 to 2,706,263 _RS12975 BWI76_RS12980: BWI76_RS12980 - AraC family transcriptional regulator, at 2,706,342 to 2,707,322 _RS12980 Position (kb) 2705 2706 2707Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2704.340 kb on + strand, within BWI76_RS12970at 2704.441 kb on + strand, within BWI76_RS12970at 2704.556 kb on + strand, within BWI76_RS12970at 2704.587 kb on - strand, within BWI76_RS12970at 2704.587 kb on - strand, within BWI76_RS12970at 2704.593 kb on - strand, within BWI76_RS12970at 2704.597 kb on - strand, within BWI76_RS12970at 2704.681 kb on - strand, within BWI76_RS12970at 2704.742 kb on + strand, within BWI76_RS12970at 2704.757 kb on - strandat 2704.779 kb on - strand, within BWI76_RS12970at 2704.815 kb on - strand, within BWI76_RS12970at 2705.019 kb on + strand, within BWI76_RS12970at 2705.019 kb on + strand, within BWI76_RS12970at 2705.019 kb on + strand, within BWI76_RS12970at 2705.506 kb on - strand, within BWI76_RS12975at 2705.506 kb on - strand, within BWI76_RS12975at 2705.747 kb on - strand, within BWI76_RS12975at 2705.932 kb on + strand, within BWI76_RS12975at 2706.272 kb on + strandat 2706.482 kb on + strand, within BWI76_RS12980at 2706.686 kb on + strand, within BWI76_RS12980at 2706.747 kb on + strand, within BWI76_RS12980at 2706.893 kb on - strand, within BWI76_RS12980at 2706.929 kb on + strand, within BWI76_RS12980at 2707.157 kb on + strand, within BWI76_RS12980at 2707.214 kb on + strand, within BWI76_RS12980at 2707.215 kb on - strand, within BWI76_RS12980at 2707.237 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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2,704,340 + BWI76_RS12970 0.40 -0.1
2,704,441 + BWI76_RS12970 0.47 +1.6
2,704,556 + BWI76_RS12970 0.55 -4.3
2,704,587 - BWI76_RS12970 0.57 +0.0
2,704,587 - BWI76_RS12970 0.57 +1.0
2,704,593 - BWI76_RS12970 0.58 +1.7
2,704,597 - BWI76_RS12970 0.58 -0.5
2,704,681 - BWI76_RS12970 0.64 -1.2
2,704,742 + BWI76_RS12970 0.68 +0.2
2,704,757 - +1.7
2,704,779 - BWI76_RS12970 0.71 -1.9
2,704,815 - BWI76_RS12970 0.73 -1.2
2,705,019 + BWI76_RS12970 0.87 -1.2
2,705,019 + BWI76_RS12970 0.87 +1.4
2,705,019 + BWI76_RS12970 0.87 +0.2
2,705,506 - BWI76_RS12975 0.25 -1.7
2,705,506 - BWI76_RS12975 0.25 -0.1
2,705,747 - BWI76_RS12975 0.49 -0.3
2,705,932 + BWI76_RS12975 0.67 -0.6
2,706,272 + +0.1
2,706,482 + BWI76_RS12980 0.14 +0.6
2,706,686 + BWI76_RS12980 0.35 -1.7
2,706,747 + BWI76_RS12980 0.41 +0.2
2,706,893 - BWI76_RS12980 0.56 +2.3
2,706,929 + BWI76_RS12980 0.60 +0.7
2,707,157 + BWI76_RS12980 0.83 +0.6
2,707,214 + BWI76_RS12980 0.89 +3.0
2,707,215 - BWI76_RS12980 0.89 -3.2
2,707,237 - -0.0

Or see this region's nucleotide sequence