Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12970 and BWI76_RS12975 are separated by 54 nucleotides BWI76_RS12975 and BWI76_RS12980 are separated by 78 nucleotides
BWI76_RS12970: BWI76_RS12970 - MFS transporter, at 2,703,762 to 2,705,198
_RS12970
BWI76_RS12975: BWI76_RS12975 - type I glyceraldehyde-3-phosphate dehydrogenase, at 2,705,253 to 2,706,263
_RS12975
BWI76_RS12980: BWI76_RS12980 - AraC family transcriptional regulator, at 2,706,342 to 2,707,322
_RS12980
Position (kb)
2705
2706
2707 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2704.340 kb on + strand, within BWI76_RS12970 at 2704.441 kb on + strand, within BWI76_RS12970 at 2704.556 kb on + strand, within BWI76_RS12970 at 2704.587 kb on - strand, within BWI76_RS12970 at 2704.587 kb on - strand, within BWI76_RS12970 at 2704.593 kb on - strand, within BWI76_RS12970 at 2704.597 kb on - strand, within BWI76_RS12970 at 2704.681 kb on - strand, within BWI76_RS12970 at 2704.742 kb on + strand, within BWI76_RS12970 at 2704.757 kb on - strand at 2704.779 kb on - strand, within BWI76_RS12970 at 2704.815 kb on - strand, within BWI76_RS12970 at 2705.019 kb on + strand, within BWI76_RS12970 at 2705.019 kb on + strand, within BWI76_RS12970 at 2705.019 kb on + strand, within BWI76_RS12970 at 2705.506 kb on - strand, within BWI76_RS12975 at 2705.506 kb on - strand, within BWI76_RS12975 at 2705.747 kb on - strand, within BWI76_RS12975 at 2705.932 kb on + strand, within BWI76_RS12975 at 2706.272 kb on + strand at 2706.482 kb on + strand, within BWI76_RS12980 at 2706.686 kb on + strand, within BWI76_RS12980 at 2706.747 kb on + strand, within BWI76_RS12980 at 2706.893 kb on - strand, within BWI76_RS12980 at 2706.929 kb on + strand, within BWI76_RS12980 at 2707.157 kb on + strand, within BWI76_RS12980 at 2707.214 kb on + strand, within BWI76_RS12980 at 2707.215 kb on - strand, within BWI76_RS12980 at 2707.237 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 2,704,340 + BWI76_RS12970 0.40 -0.1 2,704,441 + BWI76_RS12970 0.47 +1.6 2,704,556 + BWI76_RS12970 0.55 -4.3 2,704,587 - BWI76_RS12970 0.57 +0.0 2,704,587 - BWI76_RS12970 0.57 +1.0 2,704,593 - BWI76_RS12970 0.58 +1.7 2,704,597 - BWI76_RS12970 0.58 -0.5 2,704,681 - BWI76_RS12970 0.64 -1.2 2,704,742 + BWI76_RS12970 0.68 +0.2 2,704,757 - +1.7 2,704,779 - BWI76_RS12970 0.71 -1.9 2,704,815 - BWI76_RS12970 0.73 -1.2 2,705,019 + BWI76_RS12970 0.87 -1.2 2,705,019 + BWI76_RS12970 0.87 +1.4 2,705,019 + BWI76_RS12970 0.87 +0.2 2,705,506 - BWI76_RS12975 0.25 -1.7 2,705,506 - BWI76_RS12975 0.25 -0.1 2,705,747 - BWI76_RS12975 0.49 -0.3 2,705,932 + BWI76_RS12975 0.67 -0.6 2,706,272 + +0.1 2,706,482 + BWI76_RS12980 0.14 +0.6 2,706,686 + BWI76_RS12980 0.35 -1.7 2,706,747 + BWI76_RS12980 0.41 +0.2 2,706,893 - BWI76_RS12980 0.56 +2.3 2,706,929 + BWI76_RS12980 0.60 +0.7 2,707,157 + BWI76_RS12980 0.83 +0.6 2,707,214 + BWI76_RS12980 0.89 +3.0 2,707,215 - BWI76_RS12980 0.89 -3.2 2,707,237 - -0.0
Or see this region's nucleotide sequence