Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12800 and BWI76_RS12805 overlap by 1 nucleotides BWI76_RS12805 and BWI76_RS12810 are separated by 7 nucleotides BWI76_RS12810 and BWI76_RS12815 are separated by 0 nucleotides BWI76_RS12815 and BWI76_RS12820 are separated by 235 nucleotides
BWI76_RS12800: BWI76_RS12800 - hypothetical protein, at 2,666,957 to 2,669,596
_RS12800
BWI76_RS12805: BWI76_RS12805 - YnbE family lipoprotein, at 2,669,596 to 2,669,781
_RS12805
BWI76_RS12810: BWI76_RS12810 - hypothetical protein, at 2,669,789 to 2,670,112
_RS12810
BWI76_RS12815: BWI76_RS12815 - transcriptional regulator FeaR, at 2,670,113 to 2,671,021
_RS12815
BWI76_RS12820: BWI76_RS12820 - NAD-dependent phenylacetaldehyde dehydrogenase, at 2,671,257 to 2,672,756
_RS12820
Position (kb)
2670
2671
2672 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2669.147 kb on - strand, within BWI76_RS12800 at 2669.173 kb on + strand, within BWI76_RS12800 at 2669.337 kb on + strand at 2669.345 kb on - strand at 2670.529 kb on + strand, within BWI76_RS12815 at 2670.614 kb on + strand, within BWI76_RS12815 at 2671.231 kb on - strand at 2671.242 kb on + strand at 2671.441 kb on + strand, within BWI76_RS12820 at 2671.485 kb on + strand, within BWI76_RS12820 at 2671.493 kb on - strand, within BWI76_RS12820 at 2671.581 kb on - strand, within BWI76_RS12820 at 2671.609 kb on + strand at 2671.970 kb on - strand, within BWI76_RS12820
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 2,669,147 - BWI76_RS12800 0.83 -0.6 2,669,173 + BWI76_RS12800 0.84 -2.1 2,669,337 + -0.2 2,669,345 - +2.4 2,670,529 + BWI76_RS12815 0.46 -1.7 2,670,614 + BWI76_RS12815 0.55 -1.4 2,671,231 - -0.6 2,671,242 + -1.7 2,671,441 + BWI76_RS12820 0.12 -1.2 2,671,485 + BWI76_RS12820 0.15 +0.4 2,671,493 - BWI76_RS12820 0.16 -0.1 2,671,581 - BWI76_RS12820 0.22 -1.4 2,671,609 + +1.1 2,671,970 - BWI76_RS12820 0.48 -0.7
Or see this region's nucleotide sequence