Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11995

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11990 and BWI76_RS11995 are separated by 81 nucleotidesBWI76_RS11995 and BWI76_RS12000 are separated by 182 nucleotides BWI76_RS11990: BWI76_RS11990 - exoribonuclease II, at 2,522,225 to 2,524,159 _RS11990 BWI76_RS11995: BWI76_RS11995 - hypothetical protein, at 2,524,241 to 2,525,398 _RS11995 BWI76_RS12000: BWI76_RS12000 - enoyl-[acyl-carrier-protein] reductase, at 2,525,581 to 2,526,369 _RS12000 Position (kb) 2524 2525 2526Strain fitness (log2 ratio) -2 -1 0 1at 2523.353 kb on - strand, within BWI76_RS11990at 2523.396 kb on + strand, within BWI76_RS11990at 2523.595 kb on + strand, within BWI76_RS11990at 2523.705 kb on + strand, within BWI76_RS11990at 2524.064 kb on + strandat 2524.102 kb on + strandat 2524.374 kb on + strand, within BWI76_RS11995at 2524.382 kb on - strand, within BWI76_RS11995at 2524.382 kb on - strand, within BWI76_RS11995at 2524.398 kb on + strand, within BWI76_RS11995at 2524.449 kb on + strand, within BWI76_RS11995at 2524.586 kb on + strand, within BWI76_RS11995at 2524.753 kb on + strandat 2524.847 kb on - strand, within BWI76_RS11995at 2524.861 kb on + strand, within BWI76_RS11995at 2524.986 kb on - strand, within BWI76_RS11995at 2525.011 kb on + strand, within BWI76_RS11995at 2525.050 kb on + strand, within BWI76_RS11995at 2525.469 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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2,523,353 - BWI76_RS11990 0.58 -0.9
2,523,396 + BWI76_RS11990 0.61 -1.8
2,523,595 + BWI76_RS11990 0.71 -1.2
2,523,705 + BWI76_RS11990 0.76 -1.1
2,524,064 + +0.9
2,524,102 + +0.8
2,524,374 + BWI76_RS11995 0.11 +1.3
2,524,382 - BWI76_RS11995 0.12 +1.2
2,524,382 - BWI76_RS11995 0.12 +0.6
2,524,398 + BWI76_RS11995 0.14 +0.9
2,524,449 + BWI76_RS11995 0.18 +0.8
2,524,586 + BWI76_RS11995 0.30 +1.1
2,524,753 + +0.7
2,524,847 - BWI76_RS11995 0.52 +1.2
2,524,861 + BWI76_RS11995 0.54 +1.1
2,524,986 - BWI76_RS11995 0.64 +1.1
2,525,011 + BWI76_RS11995 0.66 +1.4
2,525,050 + BWI76_RS11995 0.70 +1.3
2,525,469 + +1.6

Or see this region's nucleotide sequence