Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10635 and BWI76_RS10640 are separated by 1 nucleotides BWI76_RS10640 and BWI76_RS10645 are separated by 251 nucleotides
BWI76_RS10635: BWI76_RS10635 - GGDEF domain-containing protein, at 2,245,983 to 2,246,885
_RS10635
BWI76_RS10640: BWI76_RS10640 - AraC family transcriptional regulator, at 2,246,887 to 2,247,720
_RS10640
BWI76_RS10645: BWI76_RS10645 - phytanoyl-CoA dioxygenase, at 2,247,972 to 2,248,739
_RS10645
Position (kb)
2246
2247
2248 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2245.893 kb on - strand at 2245.908 kb on + strand at 2245.908 kb on + strand at 2245.914 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.916 kb on - strand at 2245.965 kb on + strand at 2245.974 kb on + strand at 2245.977 kb on - strand at 2245.982 kb on - strand at 2246.074 kb on + strand, within BWI76_RS10635 at 2246.593 kb on + strand, within BWI76_RS10635 at 2246.699 kb on - strand, within BWI76_RS10635 at 2246.736 kb on - strand, within BWI76_RS10635 at 2246.870 kb on + strand at 2246.992 kb on + strand, within BWI76_RS10640 at 2247.121 kb on + strand, within BWI76_RS10640 at 2247.148 kb on - strand, within BWI76_RS10640 at 2247.575 kb on - strand, within BWI76_RS10640 at 2247.644 kb on + strand at 2247.729 kb on + strand at 2247.737 kb on - strand at 2247.922 kb on + strand at 2248.058 kb on + strand, within BWI76_RS10645 at 2248.058 kb on + strand, within BWI76_RS10645 at 2248.058 kb on + strand, within BWI76_RS10645 at 2248.071 kb on - strand, within BWI76_RS10645 at 2248.354 kb on + strand, within BWI76_RS10645 at 2248.411 kb on + strand, within BWI76_RS10645 at 2248.419 kb on - strand, within BWI76_RS10645 at 2248.419 kb on - strand, within BWI76_RS10645 at 2248.488 kb on + strand, within BWI76_RS10645
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 2,245,893 - +0.1 2,245,908 + -0.7 2,245,908 + -0.3 2,245,914 - -0.8 2,245,916 - -0.3 2,245,916 - -2.7 2,245,916 - -3.6 2,245,916 - -0.4 2,245,916 - +0.6 2,245,916 - -1.3 2,245,916 - -2.5 2,245,916 - -3.6 2,245,916 - +0.7 2,245,965 + -0.9 2,245,974 + +1.2 2,245,977 - +0.1 2,245,982 - -1.9 2,246,074 + BWI76_RS10635 0.10 +1.4 2,246,593 + BWI76_RS10635 0.68 +0.2 2,246,699 - BWI76_RS10635 0.79 +0.2 2,246,736 - BWI76_RS10635 0.83 -0.7 2,246,870 + +1.4 2,246,992 + BWI76_RS10640 0.13 -0.0 2,247,121 + BWI76_RS10640 0.28 -3.1 2,247,148 - BWI76_RS10640 0.31 -0.2 2,247,575 - BWI76_RS10640 0.82 -1.9 2,247,644 + -0.6 2,247,729 + +0.8 2,247,737 - +0.5 2,247,922 + -2.0 2,248,058 + BWI76_RS10645 0.11 -2.0 2,248,058 + BWI76_RS10645 0.11 -1.4 2,248,058 + BWI76_RS10645 0.11 +0.8 2,248,071 - BWI76_RS10645 0.13 -0.2 2,248,354 + BWI76_RS10645 0.50 +0.4 2,248,411 + BWI76_RS10645 0.57 +0.2 2,248,419 - BWI76_RS10645 0.58 -1.2 2,248,419 - BWI76_RS10645 0.58 +2.9 2,248,488 + BWI76_RS10645 0.67 -3.7
Or see this region's nucleotide sequence