Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07485

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07480 and BWI76_RS07485 are separated by 153 nucleotidesBWI76_RS07485 and BWI76_RS07490 overlap by 72 nucleotidesBWI76_RS07490 and BWI76_RS07495 are separated by 492 nucleotides BWI76_RS07480: BWI76_RS07480 - TonB-dependent siderophore receptor, at 1,577,213 to 1,579,357 _RS07480 BWI76_RS07485: BWI76_RS07485 - esterase, at 1,579,511 to 1,581,133 _RS07485 BWI76_RS07490: BWI76_RS07490 - hypothetical protein, at 1,581,062 to 1,581,310 _RS07490 BWI76_RS07495: BWI76_RS07495 - carbonate dehydratase, at 1,581,803 to 1,584,526 _RS07495 Position (kb) 1579 1580 1581 1582Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1578.516 kb on - strand, within BWI76_RS07480at 1578.624 kb on - strand, within BWI76_RS07480at 1578.655 kb on - strand, within BWI76_RS07480at 1578.678 kb on + strand, within BWI76_RS07480at 1578.983 kb on - strand, within BWI76_RS07480at 1579.678 kb on + strand, within BWI76_RS07485at 1579.876 kb on + strand, within BWI76_RS07485at 1579.926 kb on + strand, within BWI76_RS07485at 1580.167 kb on + strand, within BWI76_RS07485at 1580.175 kb on - strand, within BWI76_RS07485at 1580.238 kb on + strand, within BWI76_RS07485at 1580.266 kb on - strand, within BWI76_RS07485at 1580.279 kb on + strand, within BWI76_RS07485at 1580.314 kb on + strand, within BWI76_RS07485at 1580.436 kb on - strand, within BWI76_RS07485at 1580.765 kb on - strand, within BWI76_RS07485at 1580.970 kb on + strand, within BWI76_RS07485at 1580.978 kb on - strandat 1580.978 kb on - strandat 1580.982 kb on + strandat 1580.992 kb on - strandat 1581.007 kb on + strandat 1581.015 kb on - strandat 1581.015 kb on - strandat 1581.029 kb on + strandat 1581.154 kb on + strand, within BWI76_RS07490at 1581.156 kb on + strand, within BWI76_RS07490at 1581.156 kb on + strand, within BWI76_RS07490at 1581.156 kb on + strand, within BWI76_RS07490at 1581.164 kb on - strand, within BWI76_RS07490at 1581.164 kb on - strand, within BWI76_RS07490at 1581.174 kb on - strand, within BWI76_RS07490at 1581.184 kb on - strand, within BWI76_RS07490at 1581.211 kb on + strand, within BWI76_RS07490at 1581.213 kb on + strand, within BWI76_RS07490at 1581.219 kb on - strand, within BWI76_RS07490at 1581.225 kb on - strand, within BWI76_RS07490at 1581.254 kb on - strand, within BWI76_RS07490at 1581.259 kb on - strand, within BWI76_RS07490at 1581.279 kb on + strand, within BWI76_RS07490at 1581.279 kb on + strand, within BWI76_RS07490at 1581.281 kb on + strand, within BWI76_RS07490at 1581.287 kb on - strandat 1581.287 kb on - strandat 1581.287 kb on - strandat 1581.353 kb on - strandat 1581.361 kb on + strandat 1581.361 kb on + strandat 1581.369 kb on - strandat 1581.393 kb on + strandat 1581.503 kb on - strandat 1581.527 kb on - strandat 1581.527 kb on - strandat 1581.535 kb on - strandat 1581.565 kb on + strandat 1581.566 kb on + strandat 1581.574 kb on + strandat 1581.574 kb on + strandat 1581.575 kb on - strandat 1581.577 kb on - strandat 1581.578 kb on - strandat 1581.582 kb on - strandat 1581.582 kb on - strandat 1581.582 kb on - strandat 1581.582 kb on - strandat 1581.582 kb on - strandat 1581.582 kb on - strandat 1581.582 kb on - strandat 1581.597 kb on + strandat 1581.605 kb on - strandat 1581.605 kb on - strandat 1581.615 kb on - strandat 1581.615 kb on - strandat 1581.730 kb on + strandat 1581.750 kb on + strandat 1581.755 kb on + strandat 1581.759 kb on + strandat 1581.768 kb on - strandat 1581.795 kb on + strandat 1581.800 kb on + strandat 1581.837 kb on + strandat 1581.837 kb on + strandat 1581.837 kb on + strandat 1581.837 kb on + strandat 1581.845 kb on - strandat 1581.851 kb on + strandat 1581.851 kb on + strandat 1581.859 kb on - strandat 1581.859 kb on - strandat 1581.861 kb on + strandat 1581.864 kb on + strandat 1581.864 kb on + strandat 1581.864 kb on + strandat 1581.864 kb on + strandat 1581.864 kb on + strandat 1581.866 kb on + strandat 1581.866 kb on + strandat 1581.869 kb on - strandat 1581.872 kb on - strandat 1581.872 kb on - strandat 1581.872 kb on - strandat 1581.874 kb on - strandat 1581.874 kb on - strandat 1581.876 kb on + strandat 1581.876 kb on + strandat 1581.879 kb on - strandat 1581.884 kb on - strandat 1581.884 kb on - strandat 1581.885 kb on - strandat 1581.887 kb on + strandat 1581.895 kb on - strandat 1581.895 kb on - strandat 1581.898 kb on + strandat 1581.906 kb on - strandat 1581.906 kb on - strandat 1581.906 kb on - strandat 1581.906 kb on - strandat 1581.906 kb on - strandat 1581.908 kb on - strandat 1581.935 kb on + strandat 1582.018 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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1,578,516 - BWI76_RS07480 0.61 -0.4
1,578,624 - BWI76_RS07480 0.66 -1.9
1,578,655 - BWI76_RS07480 0.67 -0.1
1,578,678 + BWI76_RS07480 0.68 -2.1
1,578,983 - BWI76_RS07480 0.83 -1.0
1,579,678 + BWI76_RS07485 0.10 -2.1
1,579,876 + BWI76_RS07485 0.22 -0.1
1,579,926 + BWI76_RS07485 0.26 +0.1
1,580,167 + BWI76_RS07485 0.40 -0.5
1,580,175 - BWI76_RS07485 0.41 -0.5
1,580,238 + BWI76_RS07485 0.45 -0.7
1,580,266 - BWI76_RS07485 0.47 -1.3
1,580,279 + BWI76_RS07485 0.47 -0.3
1,580,314 + BWI76_RS07485 0.49 -0.8
1,580,436 - BWI76_RS07485 0.57 +0.9
1,580,765 - BWI76_RS07485 0.77 -0.3
1,580,970 + BWI76_RS07485 0.90 -0.5
1,580,978 - +0.8
1,580,978 - +0.4
1,580,982 + -0.6
1,580,992 - -0.3
1,581,007 + +0.7
1,581,015 - +0.0
1,581,015 - +1.1
1,581,029 + +0.1
1,581,154 + BWI76_RS07490 0.37 -0.3
1,581,156 + BWI76_RS07490 0.38 -0.4
1,581,156 + BWI76_RS07490 0.38 +0.5
1,581,156 + BWI76_RS07490 0.38 +1.5
1,581,164 - BWI76_RS07490 0.41 -1.5
1,581,164 - BWI76_RS07490 0.41 -0.7
1,581,174 - BWI76_RS07490 0.45 +1.2
1,581,184 - BWI76_RS07490 0.49 -0.2
1,581,211 + BWI76_RS07490 0.60 +2.2
1,581,213 + BWI76_RS07490 0.61 -1.1
1,581,219 - BWI76_RS07490 0.63 -0.5
1,581,225 - BWI76_RS07490 0.65 +1.8
1,581,254 - BWI76_RS07490 0.77 -0.3
1,581,259 - BWI76_RS07490 0.79 +1.5
1,581,279 + BWI76_RS07490 0.87 +0.2
1,581,279 + BWI76_RS07490 0.87 +0.1
1,581,281 + BWI76_RS07490 0.88 +0.0
1,581,287 - -0.0
1,581,287 - -0.5
1,581,287 - +1.0
1,581,353 - -2.9
1,581,361 + +1.4
1,581,361 + +1.3
1,581,369 - -1.1
1,581,393 + +0.8
1,581,503 - +0.6
1,581,527 - -1.1
1,581,527 - -1.0
1,581,535 - +0.2
1,581,565 + -1.7
1,581,566 + -2.3
1,581,574 + +1.6
1,581,574 + -2.5
1,581,575 - -0.1
1,581,577 - -0.7
1,581,578 - +2.8
1,581,582 - -1.5
1,581,582 - +0.1
1,581,582 - +1.0
1,581,582 - +0.8
1,581,582 - +0.6
1,581,582 - +0.9
1,581,582 - +0.8
1,581,597 + +1.2
1,581,605 - -0.2
1,581,605 - -0.5
1,581,615 - +1.6
1,581,615 - -2.0
1,581,730 + -0.4
1,581,750 + +0.4
1,581,755 + +0.3
1,581,759 + -1.1
1,581,768 - -0.7
1,581,795 + -2.0
1,581,800 + -0.7
1,581,837 + -2.5
1,581,837 + -1.1
1,581,837 + -3.5
1,581,837 + +0.7
1,581,845 - +0.8
1,581,851 + -0.1
1,581,851 + -1.1
1,581,859 - -1.3
1,581,859 - -2.5
1,581,861 + +2.2
1,581,864 + -0.7
1,581,864 + +0.8
1,581,864 + -1.1
1,581,864 + -0.8
1,581,864 + -2.0
1,581,866 + -1.5
1,581,866 + -0.5
1,581,869 - +1.5
1,581,872 - -0.7
1,581,872 - +1.1
1,581,872 - +0.2
1,581,874 - -1.7
1,581,874 - +0.7
1,581,876 + +1.8
1,581,876 + -0.8
1,581,879 - +1.0
1,581,884 - -0.4
1,581,884 - -0.1
1,581,885 - -0.9
1,581,887 + -0.1
1,581,895 - -0.4
1,581,895 - -0.9
1,581,898 + -1.2
1,581,906 - +1.1
1,581,906 - +2.0
1,581,906 - -1.7
1,581,906 - -0.3
1,581,906 - -2.0
1,581,908 - -1.2
1,581,935 + -0.4
1,582,018 + +1.3

Or see this region's nucleotide sequence