Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07355

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07350 and BWI76_RS07355 are separated by 365 nucleotidesBWI76_RS07355 and BWI76_RS07360 are separated by 141 nucleotides BWI76_RS07350: BWI76_RS07350 - alcohol dehydrogenase, at 1,548,661 to 1,549,614 _RS07350 BWI76_RS07355: BWI76_RS07355 - TonB-dependent siderophore receptor, at 1,549,980 to 1,552,169 _RS07355 BWI76_RS07360: BWI76_RS07360 - phenylalanine transporter, at 1,552,311 to 1,553,687 _RS07360 Position (kb) 1549 1550 1551 1552 1553Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1549.476 kb on - strand, within BWI76_RS07350at 1549.591 kb on + strandat 1549.599 kb on - strandat 1549.777 kb on - strandat 1550.028 kb on + strandat 1550.109 kb on + strandat 1550.152 kb on - strandat 1550.391 kb on + strand, within BWI76_RS07355at 1550.491 kb on - strand, within BWI76_RS07355at 1550.865 kb on - strand, within BWI76_RS07355at 1551.001 kb on - strand, within BWI76_RS07355at 1551.276 kb on + strand, within BWI76_RS07355at 1551.319 kb on + strand, within BWI76_RS07355at 1551.672 kb on + strand, within BWI76_RS07355at 1551.820 kb on + strand, within BWI76_RS07355at 1551.869 kb on + strand, within BWI76_RS07355at 1551.879 kb on + strand, within BWI76_RS07355at 1551.887 kb on - strand, within BWI76_RS07355at 1552.103 kb on + strandat 1552.268 kb on + strandat 1552.270 kb on - strandat 1552.294 kb on + strandat 1552.311 kb on - strandat 1552.335 kb on - strandat 1552.483 kb on + strand, within BWI76_RS07360at 1552.538 kb on + strand, within BWI76_RS07360at 1552.795 kb on + strand, within BWI76_RS07360at 1552.805 kb on + strand, within BWI76_RS07360at 1552.805 kb on + strand, within BWI76_RS07360at 1553.106 kb on + strand, within BWI76_RS07360

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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1,549,476 - BWI76_RS07350 0.85 +0.2
1,549,591 + -2.8
1,549,599 - +0.5
1,549,777 - +0.0
1,550,028 + +1.8
1,550,109 + -2.7
1,550,152 - -1.3
1,550,391 + BWI76_RS07355 0.19 -1.9
1,550,491 - BWI76_RS07355 0.23 +0.2
1,550,865 - BWI76_RS07355 0.40 -2.0
1,551,001 - BWI76_RS07355 0.47 +0.9
1,551,276 + BWI76_RS07355 0.59 -1.1
1,551,319 + BWI76_RS07355 0.61 -1.4
1,551,672 + BWI76_RS07355 0.77 -2.0
1,551,820 + BWI76_RS07355 0.84 -1.9
1,551,869 + BWI76_RS07355 0.86 -0.9
1,551,879 + BWI76_RS07355 0.87 -2.4
1,551,887 - BWI76_RS07355 0.87 -1.8
1,552,103 + -0.2
1,552,268 + -0.8
1,552,270 - -0.8
1,552,294 + -0.3
1,552,311 - -1.7
1,552,335 - +0.6
1,552,483 + BWI76_RS07360 0.12 -0.5
1,552,538 + BWI76_RS07360 0.16 +0.2
1,552,795 + BWI76_RS07360 0.35 +0.3
1,552,805 + BWI76_RS07360 0.36 -1.7
1,552,805 + BWI76_RS07360 0.36 -0.3
1,553,106 + BWI76_RS07360 0.58 -0.1

Or see this region's nucleotide sequence