Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06675

Experiment: Cobalt chloride 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06665 and BWI76_RS06670 are separated by 92 nucleotidesBWI76_RS06670 and BWI76_RS06675 are separated by 46 nucleotidesBWI76_RS06675 and BWI76_RS06680 are separated by 166 nucleotidesBWI76_RS06680 and BWI76_RS06685 are separated by 2 nucleotides BWI76_RS06665: BWI76_RS06665 - membrane protein, at 1,398,143 to 1,398,757 _RS06665 BWI76_RS06670: BWI76_RS06670 - hypothetical protein, at 1,398,850 to 1,399,203 _RS06670 BWI76_RS06675: BWI76_RS06675 - nickel/cobalt efflux protein RcnA, at 1,399,250 to 1,400,083 _RS06675 BWI76_RS06680: BWI76_RS06680 - hypothetical protein, at 1,400,250 to 1,400,522 _RS06680 BWI76_RS06685: BWI76_RS06685 - cyclic diguanylate phosphodiesterase (EAL) domain-containing protein, at 1,400,525 to 1,402,111 _RS06685 Position (kb) 1399 1400 1401Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1398.298 kb on + strand, within BWI76_RS06665at 1398.472 kb on + strand, within BWI76_RS06665at 1398.775 kb on - strandat 1398.898 kb on + strand, within BWI76_RS06670at 1398.964 kb on + strand, within BWI76_RS06670at 1398.972 kb on - strand, within BWI76_RS06670at 1399.025 kb on + strand, within BWI76_RS06670at 1399.045 kb on + strand, within BWI76_RS06670at 1399.058 kb on + strand, within BWI76_RS06670at 1399.070 kb on + strand, within BWI76_RS06670at 1399.078 kb on - strand, within BWI76_RS06670at 1399.178 kb on + strandat 1399.186 kb on - strandat 1399.301 kb on - strandat 1399.444 kb on + strand, within BWI76_RS06675at 1399.452 kb on - strand, within BWI76_RS06675at 1399.489 kb on + strand, within BWI76_RS06675at 1399.554 kb on + strand, within BWI76_RS06675at 1399.554 kb on + strand, within BWI76_RS06675at 1399.554 kb on + strand, within BWI76_RS06675at 1399.562 kb on - strand, within BWI76_RS06675at 1399.640 kb on + strand, within BWI76_RS06675at 1399.808 kb on - strand, within BWI76_RS06675at 1399.818 kb on - strand, within BWI76_RS06675at 1399.886 kb on - strand, within BWI76_RS06675at 1399.934 kb on + strand, within BWI76_RS06675at 1399.993 kb on + strand, within BWI76_RS06675at 1399.993 kb on + strand, within BWI76_RS06675at 1399.993 kb on + strand, within BWI76_RS06675at 1400.001 kb on - strandat 1400.010 kb on + strandat 1400.020 kb on + strandat 1400.252 kb on + strandat 1400.473 kb on + strand, within BWI76_RS06680at 1400.523 kb on + strandat 1400.627 kb on - strandat 1400.632 kb on - strandat 1400.676 kb on + strandat 1400.746 kb on + strand, within BWI76_RS06685at 1400.754 kb on - strand, within BWI76_RS06685at 1400.829 kb on - strand, within BWI76_RS06685at 1400.843 kb on - strand, within BWI76_RS06685at 1400.911 kb on + strand, within BWI76_RS06685at 1401.047 kb on - strand, within BWI76_RS06685at 1401.076 kb on - strand, within BWI76_RS06685

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM
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1,398,298 + BWI76_RS06665 0.25 +0.0
1,398,472 + BWI76_RS06665 0.53 -0.2
1,398,775 - -0.9
1,398,898 + BWI76_RS06670 0.14 -1.2
1,398,964 + BWI76_RS06670 0.32 +0.1
1,398,972 - BWI76_RS06670 0.34 -0.5
1,399,025 + BWI76_RS06670 0.49 +0.1
1,399,045 + BWI76_RS06670 0.55 -1.6
1,399,058 + BWI76_RS06670 0.59 +0.7
1,399,070 + BWI76_RS06670 0.62 +0.1
1,399,078 - BWI76_RS06670 0.64 -0.5
1,399,178 + -0.4
1,399,186 - -0.0
1,399,301 - -1.4
1,399,444 + BWI76_RS06675 0.23 -1.5
1,399,452 - BWI76_RS06675 0.24 -1.4
1,399,489 + BWI76_RS06675 0.29 -3.1
1,399,554 + BWI76_RS06675 0.36 -4.1
1,399,554 + BWI76_RS06675 0.36 -2.6
1,399,554 + BWI76_RS06675 0.36 -3.0
1,399,562 - BWI76_RS06675 0.37 +0.5
1,399,640 + BWI76_RS06675 0.47 -1.1
1,399,808 - BWI76_RS06675 0.67 -3.8
1,399,818 - BWI76_RS06675 0.68 -4.4
1,399,886 - BWI76_RS06675 0.76 -2.2
1,399,934 + BWI76_RS06675 0.82 -2.4
1,399,993 + BWI76_RS06675 0.89 -2.3
1,399,993 + BWI76_RS06675 0.89 -5.2
1,399,993 + BWI76_RS06675 0.89 -3.3
1,400,001 - -3.6
1,400,010 + -3.3
1,400,020 + -3.7
1,400,252 + +0.2
1,400,473 + BWI76_RS06680 0.82 -0.0
1,400,523 + +0.3
1,400,627 - +1.5
1,400,632 - +0.0
1,400,676 + -1.7
1,400,746 + BWI76_RS06685 0.14 -0.8
1,400,754 - BWI76_RS06685 0.14 -0.7
1,400,829 - BWI76_RS06685 0.19 -0.7
1,400,843 - BWI76_RS06685 0.20 -2.1
1,400,911 + BWI76_RS06685 0.24 +0.5
1,401,047 - BWI76_RS06685 0.33 +0.7
1,401,076 - BWI76_RS06685 0.35 -0.3

Or see this region's nucleotide sequence