Experiment: Cobalt chloride 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01890 and BWI76_RS01895 are separated by 192 nucleotides BWI76_RS01895 and BWI76_RS01900 are separated by 107 nucleotides BWI76_RS01900 and BWI76_RS01905 are separated by 140 nucleotides BWI76_RS01905 and BWI76_RS01910 are separated by 177 nucleotides
BWI76_RS01890: BWI76_RS01890 - transcriptional regulator Zur, at 385,536 to 386,051
_RS01890
BWI76_RS01895: BWI76_RS01895 - cupin, at 386,244 to 386,732
_RS01895
BWI76_RS01900: BWI76_RS01900 - tRNA-dihydrouridine synthase A, at 386,840 to 387,835
_RS01900
BWI76_RS01905: BWI76_RS01905 - envelope stress response protein PspG, at 387,976 to 388,218
_RS01905
BWI76_RS01910: BWI76_RS01910 - quinone oxidoreductase, at 388,396 to 389,379
_RS01910
Position (kb) 386
387
388 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 385.913 kb on + strand, within BWI76_RS01890 at 385.921 kb on - strand, within BWI76_RS01890 at 385.921 kb on - strand, within BWI76_RS01890 at 385.937 kb on + strand, within BWI76_RS01890 at 386.040 kb on + strand at 386.186 kb on - strand at 386.208 kb on + strand at 386.209 kb on - strand at 386.213 kb on + strand at 386.295 kb on - strand, within BWI76_RS01895 at 386.314 kb on + strand, within BWI76_RS01895 at 386.322 kb on - strand, within BWI76_RS01895 at 386.475 kb on - strand, within BWI76_RS01895 at 387.444 kb on - strand, within BWI76_RS01900 at 387.475 kb on - strand, within BWI76_RS01900 at 387.505 kb on + strand, within BWI76_RS01900 at 387.657 kb on + strand, within BWI76_RS01900 at 387.675 kb on + strand, within BWI76_RS01900 at 387.795 kb on + strand at 387.911 kb on + strand at 388.065 kb on - strand, within BWI76_RS01905 at 388.072 kb on + strand, within BWI76_RS01905 at 388.292 kb on + strand at 388.337 kb on - strand at 388.337 kb on - strand at 388.379 kb on - strand at 388.380 kb on - strand at 388.677 kb on - strand, within BWI76_RS01910 at 388.735 kb on + strand, within BWI76_RS01910 at 388.795 kb on - strand, within BWI76_RS01910
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.5 mM remove 385,913 + BWI76_RS01890 0.73 +0.8 385,921 - BWI76_RS01890 0.75 +1.0 385,921 - BWI76_RS01890 0.75 -3.6 385,937 + BWI76_RS01890 0.78 -2.6 386,040 + +0.0 386,186 - -1.3 386,208 + -0.9 386,209 - -0.9 386,213 + -0.6 386,295 - BWI76_RS01895 0.10 -0.1 386,314 + BWI76_RS01895 0.14 +1.0 386,322 - BWI76_RS01895 0.16 -0.0 386,475 - BWI76_RS01895 0.47 +0.2 387,444 - BWI76_RS01900 0.61 -4.1 387,475 - BWI76_RS01900 0.64 -2.3 387,505 + BWI76_RS01900 0.67 -2.0 387,657 + BWI76_RS01900 0.82 -2.8 387,675 + BWI76_RS01900 0.84 -1.3 387,795 + -2.2 387,911 + +0.2 388,065 - BWI76_RS01905 0.37 -0.2 388,072 + BWI76_RS01905 0.40 +0.2 388,292 + -0.5 388,337 - +0.3 388,337 - +0.7 388,379 - -0.3 388,380 - +0.3 388,677 - BWI76_RS01910 0.29 +0.7 388,735 + BWI76_RS01910 0.34 +0.8 388,795 - BWI76_RS01910 0.41 +0.5
Or see this region's nucleotide sequence