Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06027 and H281DRAFT_06028 are separated by 200 nucleotides H281DRAFT_06028 and H281DRAFT_06029 are separated by 218 nucleotides H281DRAFT_06029 and H281DRAFT_06030 overlap by 10 nucleotides H281DRAFT_06030 and H281DRAFT_06031 are separated by 193 nucleotides
H281DRAFT_06027: H281DRAFT_06027 - AMP nucleosidase, at 31,978 to 33,504
_06027
H281DRAFT_06028: H281DRAFT_06028 - hypothetical protein, at 33,705 to 34,100
_06028
H281DRAFT_06029: H281DRAFT_06029 - homoserine kinase, at 34,319 to 35,314
_06029
H281DRAFT_06030: H281DRAFT_06030 - hypothetical protein, at 35,305 to 36,114
_06030
H281DRAFT_06031: H281DRAFT_06031 - transcriptional regulator, MarR family, at 36,308 to 36,760
_06031
Position (kb) 34
35
36 Strain fitness (log2 ratio) -2
-1
0
1 at 33.398 kb on + strand at 33.399 kb on - strand at 33.535 kb on + strand at 33.535 kb on + strand at 33.536 kb on - strand at 33.638 kb on + strand at 33.951 kb on + strand, within H281DRAFT_06028 at 34.008 kb on + strand, within H281DRAFT_06028 at 35.338 kb on + strand at 35.339 kb on - strand at 35.342 kb on + strand at 35.342 kb on + strand at 35.342 kb on + strand at 35.343 kb on - strand at 35.343 kb on - strand at 35.343 kb on - strand at 35.343 kb on - strand at 35.410 kb on + strand, within H281DRAFT_06030 at 35.617 kb on + strand, within H281DRAFT_06030 at 35.617 kb on + strand, within H281DRAFT_06030 at 35.617 kb on + strand, within H281DRAFT_06030 at 35.770 kb on + strand, within H281DRAFT_06030 at 35.771 kb on - strand, within H281DRAFT_06030 at 35.828 kb on + strand, within H281DRAFT_06030 at 35.829 kb on - strand, within H281DRAFT_06030 at 35.927 kb on + strand, within H281DRAFT_06030 at 35.928 kb on - strand, within H281DRAFT_06030 at 35.928 kb on - strand, within H281DRAFT_06030 at 36.028 kb on + strand, within H281DRAFT_06030 at 36.029 kb on - strand, within H281DRAFT_06030 at 36.040 kb on + strand at 36.040 kb on + strand at 36.041 kb on - strand at 36.049 kb on + strand at 36.049 kb on + strand at 36.099 kb on + strand at 36.120 kb on + strand at 36.207 kb on - strand at 36.217 kb on + strand at 36.217 kb on + strand at 36.218 kb on - strand at 36.218 kb on - strand at 36.226 kb on + strand at 36.274 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 33,398 + -2.3 33,399 - -0.8 33,535 + +0.7 33,535 + +1.5 33,536 - +0.2 33,638 + +0.6 33,951 + H281DRAFT_06028 0.62 +0.8 34,008 + H281DRAFT_06028 0.77 -0.3 35,338 + +0.4 35,339 - +0.4 35,342 + -0.1 35,342 + +0.0 35,342 + +0.8 35,343 - -0.8 35,343 - -1.6 35,343 - -2.0 35,343 - -0.2 35,410 + H281DRAFT_06030 0.13 +1.4 35,617 + H281DRAFT_06030 0.39 -1.3 35,617 + H281DRAFT_06030 0.39 +0.4 35,617 + H281DRAFT_06030 0.39 -0.2 35,770 + H281DRAFT_06030 0.57 +0.6 35,771 - H281DRAFT_06030 0.58 -0.3 35,828 + H281DRAFT_06030 0.65 -0.6 35,829 - H281DRAFT_06030 0.65 -0.7 35,927 + H281DRAFT_06030 0.77 +0.4 35,928 - H281DRAFT_06030 0.77 +0.1 35,928 - H281DRAFT_06030 0.77 -0.6 36,028 + H281DRAFT_06030 0.89 +0.6 36,029 - H281DRAFT_06030 0.89 +0.1 36,040 + +1.4 36,040 + +0.0 36,041 - +0.1 36,049 + +0.7 36,049 + +1.1 36,099 + +1.4 36,120 + -0.1 36,207 - -0.1 36,217 + -0.1 36,217 + +1.5 36,218 - +0.9 36,218 - -0.1 36,226 + -0.1 36,274 + -0.8
Or see this region's nucleotide sequence