Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05662 and H281DRAFT_05663 are separated by 81 nucleotides H281DRAFT_05663 and H281DRAFT_05664 are separated by 194 nucleotides H281DRAFT_05664 and H281DRAFT_05665 are separated by 39 nucleotides H281DRAFT_05665 and H281DRAFT_05666 are separated by 34 nucleotides
H281DRAFT_05662: H281DRAFT_05662 - Uncharacterized membrane protein, at 81,514 to 81,909
_05662
H281DRAFT_05663: H281DRAFT_05663 - histidine triad (HIT) family protein, at 81,991 to 82,356
_05663
H281DRAFT_05664: H281DRAFT_05664 - sec-independent protein translocase protein TatA, at 82,551 to 82,787
_05664
H281DRAFT_05665: H281DRAFT_05665 - sec-independent protein translocase protein TatB, at 82,827 to 83,345
_05665
H281DRAFT_05666: H281DRAFT_05666 - Sec-independent protein translocase TatC, at 83,380 to 84,159
_05666
Position (kb) 82
83 Strain fitness (log2 ratio) -2
-1
0
1
2 at 81.610 kb on + strand, within H281DRAFT_05662 at 81.611 kb on - strand, within H281DRAFT_05662 at 81.620 kb on - strand, within H281DRAFT_05662 at 81.620 kb on - strand, within H281DRAFT_05662 at 81.676 kb on + strand, within H281DRAFT_05662 at 81.676 kb on + strand, within H281DRAFT_05662 at 81.676 kb on + strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.677 kb on - strand, within H281DRAFT_05662 at 81.710 kb on - strand, within H281DRAFT_05662 at 81.710 kb on - strand, within H281DRAFT_05662 at 81.763 kb on + strand, within H281DRAFT_05662 at 81.763 kb on + strand, within H281DRAFT_05662 at 81.839 kb on - strand, within H281DRAFT_05662 at 81.843 kb on + strand, within H281DRAFT_05662 at 81.843 kb on + strand, within H281DRAFT_05662 at 81.843 kb on + strand, within H281DRAFT_05662 at 81.844 kb on - strand, within H281DRAFT_05662 at 81.844 kb on - strand, within H281DRAFT_05662 at 81.846 kb on + strand, within H281DRAFT_05662 at 81.846 kb on + strand, within H281DRAFT_05662 at 81.846 kb on + strand, within H281DRAFT_05662 at 81.846 kb on + strand, within H281DRAFT_05662 at 81.847 kb on - strand, within H281DRAFT_05662 at 81.847 kb on - strand, within H281DRAFT_05662 at 81.862 kb on + strand, within H281DRAFT_05662 at 81.863 kb on - strand, within H281DRAFT_05662 at 81.863 kb on - strand, within H281DRAFT_05662 at 81.863 kb on - strand, within H281DRAFT_05662 at 81.868 kb on + strand, within H281DRAFT_05662 at 81.868 kb on + strand, within H281DRAFT_05662 at 81.869 kb on - strand, within H281DRAFT_05662 at 81.873 kb on + strand at 81.923 kb on + strand at 81.923 kb on + strand at 81.973 kb on + strand at 81.987 kb on + strand at 81.987 kb on + strand at 81.988 kb on - strand at 81.988 kb on - strand at 81.988 kb on - strand at 81.988 kb on - strand at 81.988 kb on - strand at 82.185 kb on + strand, within H281DRAFT_05663 at 82.185 kb on + strand, within H281DRAFT_05663 at 82.186 kb on - strand, within H281DRAFT_05663 at 82.186 kb on - strand, within H281DRAFT_05663 at 82.186 kb on - strand, within H281DRAFT_05663 at 82.186 kb on - strand, within H281DRAFT_05663 at 82.234 kb on + strand, within H281DRAFT_05663 at 82.234 kb on + strand, within H281DRAFT_05663 at 82.300 kb on + strand, within H281DRAFT_05663 at 82.300 kb on + strand, within H281DRAFT_05663 at 82.410 kb on + strand at 82.458 kb on + strand at 82.463 kb on + strand at 82.463 kb on + strand at 83.365 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 81,610 + H281DRAFT_05662 0.24 +0.1 81,611 - H281DRAFT_05662 0.24 -0.6 81,620 - H281DRAFT_05662 0.27 -0.6 81,620 - H281DRAFT_05662 0.27 +1.2 81,676 + H281DRAFT_05662 0.41 +0.6 81,676 + H281DRAFT_05662 0.41 +0.3 81,676 + H281DRAFT_05662 0.41 +0.2 81,677 - H281DRAFT_05662 0.41 -0.6 81,677 - H281DRAFT_05662 0.41 -1.1 81,677 - H281DRAFT_05662 0.41 +0.1 81,677 - H281DRAFT_05662 0.41 -1.3 81,677 - H281DRAFT_05662 0.41 +0.5 81,677 - H281DRAFT_05662 0.41 +0.2 81,677 - H281DRAFT_05662 0.41 -1.4 81,677 - H281DRAFT_05662 0.41 +0.0 81,710 - H281DRAFT_05662 0.49 +0.1 81,710 - H281DRAFT_05662 0.49 -0.7 81,763 + H281DRAFT_05662 0.63 -0.3 81,763 + H281DRAFT_05662 0.63 +1.0 81,839 - H281DRAFT_05662 0.82 -0.4 81,843 + H281DRAFT_05662 0.83 -1.8 81,843 + H281DRAFT_05662 0.83 +0.3 81,843 + H281DRAFT_05662 0.83 +1.2 81,844 - H281DRAFT_05662 0.83 -0.7 81,844 - H281DRAFT_05662 0.83 -1.9 81,846 + H281DRAFT_05662 0.84 +0.1 81,846 + H281DRAFT_05662 0.84 -0.9 81,846 + H281DRAFT_05662 0.84 -1.6 81,846 + H281DRAFT_05662 0.84 -1.6 81,847 - H281DRAFT_05662 0.84 -0.6 81,847 - H281DRAFT_05662 0.84 -1.2 81,862 + H281DRAFT_05662 0.88 -0.1 81,863 - H281DRAFT_05662 0.88 +0.7 81,863 - H281DRAFT_05662 0.88 -2.7 81,863 - H281DRAFT_05662 0.88 -0.7 81,868 + H281DRAFT_05662 0.89 +1.2 81,868 + H281DRAFT_05662 0.89 +0.2 81,869 - H281DRAFT_05662 0.90 -0.7 81,873 + -0.1 81,923 + -0.1 81,923 + -0.7 81,973 + +0.2 81,987 + +0.1 81,987 + +0.8 81,988 - -0.7 81,988 - -0.2 81,988 - -1.2 81,988 - +0.2 81,988 - -0.4 82,185 + H281DRAFT_05663 0.53 +0.8 82,185 + H281DRAFT_05663 0.53 +1.2 82,186 - H281DRAFT_05663 0.53 +0.3 82,186 - H281DRAFT_05663 0.53 -2.6 82,186 - H281DRAFT_05663 0.53 -1.3 82,186 - H281DRAFT_05663 0.53 +0.4 82,234 + H281DRAFT_05663 0.66 -1.4 82,234 + H281DRAFT_05663 0.66 -0.1 82,300 + H281DRAFT_05663 0.84 -0.1 82,300 + H281DRAFT_05663 0.84 +0.5 82,410 + +0.2 82,458 + +0.2 82,463 + -0.3 82,463 + +2.0 83,365 + +1.1
Or see this region's nucleotide sequence