Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05225 and H281DRAFT_05226 are separated by 521 nucleotides H281DRAFT_05226 and H281DRAFT_05227 overlap by 4 nucleotides
H281DRAFT_05225: H281DRAFT_05225 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 186,100 to 187,062
_05225
H281DRAFT_05226: H281DRAFT_05226 - monosaccharide ABC transporter ATP-binding protein, CUT2 family, at 187,584 to 189,179
_05226
H281DRAFT_05227: H281DRAFT_05227 - monosaccharide ABC transporter membrane protein, CUT2 family, at 189,176 to 190,252
_05227
Position (kb) 187
188
189
190 Strain fitness (log2 ratio) -2
-1
0
1 at 186.773 kb on - strand, within H281DRAFT_05225 at 187.242 kb on + strand at 187.243 kb on - strand at 187.379 kb on - strand at 187.431 kb on + strand at 187.431 kb on + strand at 187.432 kb on - strand at 188.024 kb on + strand, within H281DRAFT_05226 at 188.202 kb on + strand, within H281DRAFT_05226 at 188.202 kb on + strand, within H281DRAFT_05226 at 188.203 kb on - strand, within H281DRAFT_05226 at 188.204 kb on + strand, within H281DRAFT_05226 at 188.204 kb on + strand, within H281DRAFT_05226 at 188.373 kb on - strand, within H281DRAFT_05226 at 188.514 kb on + strand, within H281DRAFT_05226 at 188.901 kb on - strand, within H281DRAFT_05226 at 188.933 kb on + strand, within H281DRAFT_05226 at 188.937 kb on + strand, within H281DRAFT_05226 at 188.937 kb on + strand, within H281DRAFT_05226 at 188.938 kb on - strand, within H281DRAFT_05226 at 188.938 kb on - strand, within H281DRAFT_05226 at 189.074 kb on + strand at 189.338 kb on + strand, within H281DRAFT_05227 at 189.737 kb on + strand, within H281DRAFT_05227 at 189.863 kb on + strand, within H281DRAFT_05227 at 189.926 kb on + strand, within H281DRAFT_05227 at 189.926 kb on + strand, within H281DRAFT_05227 at 189.926 kb on + strand, within H281DRAFT_05227 at 189.927 kb on - strand, within H281DRAFT_05227 at 189.928 kb on + strand, within H281DRAFT_05227 at 189.929 kb on - strand, within H281DRAFT_05227 at 189.929 kb on - strand, within H281DRAFT_05227 at 189.929 kb on - strand, within H281DRAFT_05227 at 190.102 kb on + strand, within H281DRAFT_05227
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 186,773 - H281DRAFT_05225 0.70 -0.8 187,242 + +0.3 187,243 - +0.3 187,379 - -0.5 187,431 + +0.5 187,431 + +0.4 187,432 - -0.6 188,024 + H281DRAFT_05226 0.28 +0.2 188,202 + H281DRAFT_05226 0.39 +0.9 188,202 + H281DRAFT_05226 0.39 +0.3 188,203 - H281DRAFT_05226 0.39 +0.2 188,204 + H281DRAFT_05226 0.39 -0.0 188,204 + H281DRAFT_05226 0.39 -0.3 188,373 - H281DRAFT_05226 0.49 -0.5 188,514 + H281DRAFT_05226 0.58 -0.0 188,901 - H281DRAFT_05226 0.83 +0.4 188,933 + H281DRAFT_05226 0.85 +0.6 188,937 + H281DRAFT_05226 0.85 +0.0 188,937 + H281DRAFT_05226 0.85 -0.9 188,938 - H281DRAFT_05226 0.85 -0.8 188,938 - H281DRAFT_05226 0.85 -0.2 189,074 + -0.5 189,338 + H281DRAFT_05227 0.15 -0.1 189,737 + H281DRAFT_05227 0.52 -2.2 189,863 + H281DRAFT_05227 0.64 -0.3 189,926 + H281DRAFT_05227 0.70 +0.4 189,926 + H281DRAFT_05227 0.70 +0.2 189,926 + H281DRAFT_05227 0.70 -0.5 189,927 - H281DRAFT_05227 0.70 +0.7 189,928 + H281DRAFT_05227 0.70 -0.3 189,929 - H281DRAFT_05227 0.70 -1.3 189,929 - H281DRAFT_05227 0.70 -0.2 189,929 - H281DRAFT_05227 0.70 -0.3 190,102 + H281DRAFT_05227 0.86 +0.9
Or see this region's nucleotide sequence