Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03702 and H281DRAFT_03703 overlap by 4 nucleotides H281DRAFT_03703 and H281DRAFT_03704 overlap by 4 nucleotides H281DRAFT_03704 and H281DRAFT_03705 are separated by 174 nucleotides
H281DRAFT_03702: H281DRAFT_03702 - transcriptional regulator, MarR family, at 214,918 to 215,490
_03702
H281DRAFT_03703: H281DRAFT_03703 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 215,487 to 216,260
_03703
H281DRAFT_03704: H281DRAFT_03704 - anthraniloyl-CoA monooxygenase, at 216,257 to 218,629
_03704
H281DRAFT_03705: H281DRAFT_03705 - transcriptional regulator, GntR family, at 218,804 to 220,135
_03705
Position (kb) 216
217
218
219 Strain fitness (log2 ratio) -1
0
1
2 at 215.705 kb on - strand, within H281DRAFT_03703 at 215.813 kb on - strand, within H281DRAFT_03703 at 216.803 kb on + strand, within H281DRAFT_03704 at 216.879 kb on + strand, within H281DRAFT_03704 at 217.018 kb on - strand, within H281DRAFT_03704 at 217.171 kb on + strand, within H281DRAFT_03704 at 217.172 kb on - strand, within H281DRAFT_03704 at 217.203 kb on + strand, within H281DRAFT_03704 at 217.204 kb on - strand, within H281DRAFT_03704 at 217.448 kb on + strand, within H281DRAFT_03704 at 218.183 kb on - strand, within H281DRAFT_03704 at 218.253 kb on + strand, within H281DRAFT_03704 at 218.516 kb on - strand at 218.667 kb on + strand at 218.808 kb on + strand at 218.809 kb on - strand at 218.809 kb on - strand at 219.463 kb on - strand, within H281DRAFT_03705 at 219.589 kb on - strand, within H281DRAFT_03705
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 215,705 - H281DRAFT_03703 0.28 -0.5 215,813 - H281DRAFT_03703 0.42 -0.3 216,803 + H281DRAFT_03704 0.23 -0.7 216,879 + H281DRAFT_03704 0.26 -0.1 217,018 - H281DRAFT_03704 0.32 -0.5 217,171 + H281DRAFT_03704 0.39 -0.8 217,172 - H281DRAFT_03704 0.39 +2.0 217,203 + H281DRAFT_03704 0.40 -0.5 217,204 - H281DRAFT_03704 0.40 +0.4 217,448 + H281DRAFT_03704 0.50 +0.2 218,183 - H281DRAFT_03704 0.81 +1.0 218,253 + H281DRAFT_03704 0.84 +0.5 218,516 - +0.9 218,667 + +0.5 218,808 + -0.6 218,809 - -1.7 218,809 - +1.5 219,463 - H281DRAFT_03705 0.49 -1.4 219,589 - H281DRAFT_03705 0.59 -0.7
Or see this region's nucleotide sequence