Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03520 and H281DRAFT_03521 are separated by 129 nucleotides H281DRAFT_03521 and H281DRAFT_03522 are separated by 164 nucleotides H281DRAFT_03522 and H281DRAFT_03523 are separated by 247 nucleotides
H281DRAFT_03520: H281DRAFT_03520 - hypothetical protein, at 19,885 to 21,225
_03520
H281DRAFT_03521: H281DRAFT_03521 - hypothetical protein, at 21,355 to 21,585
_03521
H281DRAFT_03522: H281DRAFT_03522 - Uncharacterized membrane protein, at 21,750 to 22,040
_03522
H281DRAFT_03523: H281DRAFT_03523 - mannose-6-phosphate isomerase, at 22,288 to 23,397
_03523
Position (kb) 21
22
23 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 21.209 kb on - strand at 21.226 kb on - strand at 21.428 kb on + strand, within H281DRAFT_03521 at 21.457 kb on - strand at 21.457 kb on - strand at 21.689 kb on + strand at 21.690 kb on - strand at 21.882 kb on - strand, within H281DRAFT_03522 at 21.883 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.921 kb on + strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.922 kb on - strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.929 kb on + strand, within H281DRAFT_03522 at 21.930 kb on - strand, within H281DRAFT_03522 at 21.930 kb on - strand, within H281DRAFT_03522 at 22.063 kb on + strand at 22.063 kb on + strand at 22.116 kb on + strand at 22.116 kb on + strand at 22.117 kb on - strand at 22.117 kb on - strand at 22.122 kb on - strand at 22.122 kb on - strand at 22.225 kb on + strand at 22.283 kb on + strand at 22.283 kb on + strand at 22.283 kb on + strand at 22.283 kb on + strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.284 kb on - strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.287 kb on + strand at 22.288 kb on - strand at 22.288 kb on - strand at 22.522 kb on + strand, within H281DRAFT_03523 at 22.549 kb on - strand, within H281DRAFT_03523 at 22.588 kb on + strand, within H281DRAFT_03523 at 22.636 kb on + strand, within H281DRAFT_03523 at 22.637 kb on - strand, within H281DRAFT_03523 at 22.673 kb on - strand, within H281DRAFT_03523 at 22.836 kb on - strand, within H281DRAFT_03523
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 21,209 - -0.8 21,226 - -0.8 21,428 + H281DRAFT_03521 0.32 -0.2 21,457 - +0.4 21,457 - +1.6 21,689 + +0.2 21,690 - +0.5 21,882 - H281DRAFT_03522 0.45 -0.5 21,883 + H281DRAFT_03522 0.46 +0.3 21,921 + H281DRAFT_03522 0.59 -0.7 21,921 + H281DRAFT_03522 0.59 +1.8 21,921 + H281DRAFT_03522 0.59 -0.2 21,922 - H281DRAFT_03522 0.59 -1.4 21,922 - H281DRAFT_03522 0.59 -0.1 21,922 - H281DRAFT_03522 0.59 -1.4 21,929 + H281DRAFT_03522 0.62 -1.9 21,929 + H281DRAFT_03522 0.62 +0.4 21,929 + H281DRAFT_03522 0.62 -1.4 21,929 + H281DRAFT_03522 0.62 -0.2 21,929 + H281DRAFT_03522 0.62 -0.5 21,929 + H281DRAFT_03522 0.62 +0.2 21,930 - H281DRAFT_03522 0.62 -0.0 21,930 - H281DRAFT_03522 0.62 +0.2 22,063 + +1.1 22,063 + +0.9 22,116 + +0.5 22,116 + +0.0 22,117 - -0.4 22,117 - +0.7 22,122 - -0.5 22,122 - -0.3 22,225 + -2.2 22,283 + -1.1 22,283 + -0.1 22,283 + -0.1 22,283 + -0.4 22,284 - -2.3 22,284 - -0.2 22,284 - +1.8 22,284 - +0.0 22,284 - -0.5 22,284 - +0.2 22,284 - -0.2 22,287 + -0.3 22,287 + -0.4 22,287 + -3.3 22,287 + +0.4 22,287 + +0.4 22,287 + -0.1 22,288 - +0.7 22,288 - +0.5 22,522 + H281DRAFT_03523 0.21 -0.1 22,549 - H281DRAFT_03523 0.24 +1.2 22,588 + H281DRAFT_03523 0.27 -1.4 22,636 + H281DRAFT_03523 0.31 +1.1 22,637 - H281DRAFT_03523 0.31 +0.2 22,673 - H281DRAFT_03523 0.35 +0.1 22,836 - H281DRAFT_03523 0.49 -0.2
Or see this region's nucleotide sequence