Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03065 and H281DRAFT_03066 are separated by 107 nucleotides H281DRAFT_03066 and H281DRAFT_03067 are separated by 123 nucleotides H281DRAFT_03067 and H281DRAFT_03068 are separated by 53 nucleotides
H281DRAFT_03065: H281DRAFT_03065 - MFS transporter, DHA1 family, multidrug resistance protein, at 96,615 to 97,877
_03065
H281DRAFT_03066: H281DRAFT_03066 - transcriptional regulator, LysR family, at 97,985 to 98,911
_03066
H281DRAFT_03067: H281DRAFT_03067 - peroxiredoxin, Ohr subfamily, at 99,035 to 99,451
_03067
H281DRAFT_03068: H281DRAFT_03068 - hypothetical protein, at 99,505 to 99,732
_03068
Position (kb) 97
98
99 Strain fitness (log2 ratio) -2
-1
0
1
2 at 97.058 kb on + strand, within H281DRAFT_03065 at 97.059 kb on - strand, within H281DRAFT_03065 at 97.059 kb on - strand, within H281DRAFT_03065 at 97.442 kb on + strand, within H281DRAFT_03065 at 97.555 kb on - strand, within H281DRAFT_03065 at 97.711 kb on + strand at 97.712 kb on - strand, within H281DRAFT_03065 at 97.924 kb on - strand at 98.243 kb on - strand, within H281DRAFT_03066 at 98.263 kb on + strand, within H281DRAFT_03066 at 98.782 kb on + strand, within H281DRAFT_03066 at 98.783 kb on - strand, within H281DRAFT_03066 at 98.953 kb on - strand at 98.977 kb on - strand at 98.993 kb on + strand at 99.017 kb on - strand at 99.017 kb on - strand at 99.085 kb on - strand, within H281DRAFT_03067 at 99.467 kb on - strand at 99.469 kb on + strand at 99.507 kb on - strand at 99.507 kb on - strand at 99.507 kb on - strand at 99.724 kb on + strand at 99.850 kb on + strand at 99.866 kb on - strand at 99.908 kb on - strand at 99.908 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 97,058 + H281DRAFT_03065 0.35 +0.2 97,059 - H281DRAFT_03065 0.35 -1.4 97,059 - H281DRAFT_03065 0.35 -0.5 97,442 + H281DRAFT_03065 0.65 +0.3 97,555 - H281DRAFT_03065 0.74 -1.4 97,711 + +2.7 97,712 - H281DRAFT_03065 0.87 -1.5 97,924 - -0.1 98,243 - H281DRAFT_03066 0.28 -0.6 98,263 + H281DRAFT_03066 0.30 +0.9 98,782 + H281DRAFT_03066 0.86 +0.2 98,783 - H281DRAFT_03066 0.86 +0.5 98,953 - -0.5 98,977 - +0.3 98,993 + -0.1 99,017 - -0.6 99,017 - -2.2 99,085 - H281DRAFT_03067 0.12 +0.1 99,467 - +0.2 99,469 + +2.2 99,507 - +1.7 99,507 - +0.1 99,507 - -0.3 99,724 + -0.0 99,850 + -0.7 99,866 - -1.8 99,908 - -0.5 99,908 - +0.4
Or see this region's nucleotide sequence