Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02830 and H281DRAFT_02831 are separated by 20 nucleotides H281DRAFT_02831 and H281DRAFT_02832 are separated by 189 nucleotides H281DRAFT_02832 and H281DRAFT_02833 are separated by 22 nucleotides H281DRAFT_02833 and H281DRAFT_02834 are separated by 2 nucleotides
H281DRAFT_02830: H281DRAFT_02830 - hypothetical protein, at 423,477 to 423,713
_02830
H281DRAFT_02831: H281DRAFT_02831 - hypothetical protein, at 423,734 to 423,979
_02831
H281DRAFT_02832: H281DRAFT_02832 - hypothetical protein, at 424,169 to 424,381
_02832
H281DRAFT_02833: H281DRAFT_02833 - Cytochrome c, mono- and diheme variants, at 424,404 to 425,720
_02833
H281DRAFT_02834: H281DRAFT_02834 - Choline dehydrogenase, at 425,723 to 427,345
_02834
Position (kb) 424
425
426 Strain fitness (log2 ratio) -2
-1
0
1
2 at 423.534 kb on + strand, within H281DRAFT_02830 at 423.534 kb on + strand, within H281DRAFT_02830 at 423.535 kb on - strand, within H281DRAFT_02830 at 423.607 kb on - strand, within H281DRAFT_02830 at 423.897 kb on - strand, within H281DRAFT_02831 at 423.897 kb on - strand, within H281DRAFT_02831 at 423.897 kb on - strand, within H281DRAFT_02831 at 423.897 kb on - strand, within H281DRAFT_02831 at 423.897 kb on - strand, within H281DRAFT_02831 at 423.967 kb on + strand at 423.968 kb on - strand at 423.968 kb on - strand at 423.986 kb on - strand at 424.164 kb on + strand at 424.164 kb on + strand at 424.165 kb on - strand at 424.214 kb on - strand, within H281DRAFT_02832 at 424.214 kb on - strand, within H281DRAFT_02832 at 424.474 kb on + strand at 424.639 kb on + strand at 424.640 kb on - strand, within H281DRAFT_02833 at 424.840 kb on + strand, within H281DRAFT_02833 at 424.841 kb on - strand, within H281DRAFT_02833 at 424.971 kb on - strand, within H281DRAFT_02833 at 425.147 kb on - strand, within H281DRAFT_02833 at 425.147 kb on - strand, within H281DRAFT_02833 at 425.147 kb on - strand, within H281DRAFT_02833 at 425.192 kb on - strand, within H281DRAFT_02833 at 425.311 kb on + strand, within H281DRAFT_02833 at 425.318 kb on - strand, within H281DRAFT_02833 at 425.320 kb on - strand, within H281DRAFT_02833 at 425.362 kb on + strand, within H281DRAFT_02833 at 425.363 kb on - strand, within H281DRAFT_02833 at 425.363 kb on - strand, within H281DRAFT_02833 at 425.634 kb on - strand at 425.967 kb on - strand, within H281DRAFT_02834 at 425.985 kb on + strand, within H281DRAFT_02834 at 425.986 kb on - strand, within H281DRAFT_02834 at 426.360 kb on + strand, within H281DRAFT_02834 at 426.405 kb on - strand, within H281DRAFT_02834 at 426.405 kb on - strand, within H281DRAFT_02834 at 426.591 kb on + strand, within H281DRAFT_02834 at 426.591 kb on + strand, within H281DRAFT_02834 at 426.661 kb on - strand, within H281DRAFT_02834
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 423,534 + H281DRAFT_02830 0.24 -0.1 423,534 + H281DRAFT_02830 0.24 -0.8 423,535 - H281DRAFT_02830 0.24 +1.2 423,607 - H281DRAFT_02830 0.55 -1.0 423,897 - H281DRAFT_02831 0.66 +0.5 423,897 - H281DRAFT_02831 0.66 +2.4 423,897 - H281DRAFT_02831 0.66 +1.1 423,897 - H281DRAFT_02831 0.66 -0.9 423,897 - H281DRAFT_02831 0.66 +0.1 423,967 + -1.9 423,968 - -0.3 423,968 - -0.3 423,986 - +0.1 424,164 + +0.8 424,164 + -1.0 424,165 - -0.1 424,214 - H281DRAFT_02832 0.21 -1.7 424,214 - H281DRAFT_02832 0.21 -0.1 424,474 + -1.0 424,639 + +0.4 424,640 - H281DRAFT_02833 0.18 -0.1 424,840 + H281DRAFT_02833 0.33 -0.3 424,841 - H281DRAFT_02833 0.33 +0.5 424,971 - H281DRAFT_02833 0.43 +1.3 425,147 - H281DRAFT_02833 0.56 +0.9 425,147 - H281DRAFT_02833 0.56 -0.7 425,147 - H281DRAFT_02833 0.56 -0.0 425,192 - H281DRAFT_02833 0.60 -1.0 425,311 + H281DRAFT_02833 0.69 -0.5 425,318 - H281DRAFT_02833 0.69 +0.1 425,320 - H281DRAFT_02833 0.70 -1.0 425,362 + H281DRAFT_02833 0.73 -0.5 425,363 - H281DRAFT_02833 0.73 -0.7 425,363 - H281DRAFT_02833 0.73 +0.2 425,634 - -0.1 425,967 - H281DRAFT_02834 0.15 -1.1 425,985 + H281DRAFT_02834 0.16 +1.0 425,986 - H281DRAFT_02834 0.16 +1.2 426,360 + H281DRAFT_02834 0.39 +0.4 426,405 - H281DRAFT_02834 0.42 +0.1 426,405 - H281DRAFT_02834 0.42 +0.2 426,591 + H281DRAFT_02834 0.53 -1.5 426,591 + H281DRAFT_02834 0.53 +0.1 426,661 - H281DRAFT_02834 0.58 -0.4
Or see this region's nucleotide sequence