Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02456 and H281DRAFT_02457 are separated by 28 nucleotides H281DRAFT_02457 and H281DRAFT_02458 overlap by 4 nucleotides
H281DRAFT_02456: H281DRAFT_02456 - sarcosine oxidase subunit beta, at 21,856 to 23,100
_02456
H281DRAFT_02457: H281DRAFT_02457 - sarcosine oxidase subunit delta, at 23,129 to 23,443
_02457
H281DRAFT_02458: H281DRAFT_02458 - sarcosine oxidase subunit alpha, at 23,440 to 26,442
_02458
Position (kb) 23
24 Strain fitness (log2 ratio) -2
-1
0
1 at 22.181 kb on - strand, within H281DRAFT_02456 at 22.181 kb on - strand, within H281DRAFT_02456 at 22.181 kb on - strand, within H281DRAFT_02456 at 22.225 kb on - strand, within H281DRAFT_02456 at 22.569 kb on + strand, within H281DRAFT_02456 at 22.696 kb on + strand, within H281DRAFT_02456 at 22.697 kb on - strand, within H281DRAFT_02456 at 22.750 kb on + strand, within H281DRAFT_02456 at 22.924 kb on + strand, within H281DRAFT_02456 at 22.925 kb on - strand, within H281DRAFT_02456 at 22.984 kb on + strand at 23.051 kb on - strand at 23.051 kb on - strand at 23.051 kb on - strand at 23.051 kb on - strand at 23.253 kb on - strand, within H281DRAFT_02457 at 23.306 kb on - strand, within H281DRAFT_02457 at 23.531 kb on - strand at 23.815 kb on + strand, within H281DRAFT_02458 at 23.818 kb on + strand, within H281DRAFT_02458 at 24.388 kb on + strand, within H281DRAFT_02458 at 24.395 kb on + strand, within H281DRAFT_02458 at 24.395 kb on + strand, within H281DRAFT_02458
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 22,181 - H281DRAFT_02456 0.26 -0.2 22,181 - H281DRAFT_02456 0.26 +0.4 22,181 - H281DRAFT_02456 0.26 -1.4 22,225 - H281DRAFT_02456 0.30 +0.4 22,569 + H281DRAFT_02456 0.57 +0.2 22,696 + H281DRAFT_02456 0.67 +0.1 22,697 - H281DRAFT_02456 0.68 -0.4 22,750 + H281DRAFT_02456 0.72 +0.3 22,924 + H281DRAFT_02456 0.86 -0.9 22,925 - H281DRAFT_02456 0.86 -1.0 22,984 + -0.1 23,051 - -0.4 23,051 - +0.0 23,051 - +1.1 23,051 - +0.2 23,253 - H281DRAFT_02457 0.39 -1.2 23,306 - H281DRAFT_02457 0.56 -0.2 23,531 - -1.1 23,815 + H281DRAFT_02458 0.12 -0.0 23,818 + H281DRAFT_02458 0.13 +0.8 24,388 + H281DRAFT_02458 0.32 -0.4 24,395 + H281DRAFT_02458 0.32 +0.3 24,395 + H281DRAFT_02458 0.32 -1.8
Or see this region's nucleotide sequence