Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02155 and H281DRAFT_02156 are separated by 90 nucleotides H281DRAFT_02156 and H281DRAFT_02157 are separated by 148 nucleotides H281DRAFT_02157 and H281DRAFT_02158 are separated by 297 nucleotides H281DRAFT_02158 and H281DRAFT_02159 are separated by 397 nucleotides
H281DRAFT_02155: H281DRAFT_02155 - hypothetical protein, at 294,739 to 295,368
_02155
H281DRAFT_02156: H281DRAFT_02156 - transcriptional regulator, AsnC family, at 295,459 to 295,917
_02156
H281DRAFT_02157: H281DRAFT_02157 - cation diffusion facilitator family transporter, at 296,066 to 297,304
_02157
H281DRAFT_02158: H281DRAFT_02158 - DNA-binding protein H-NS, at 297,602 to 297,904
_02158
H281DRAFT_02159: H281DRAFT_02159 - hypothetical protein, at 298,302 to 298,964
_02159
Position (kb) 296
297
298 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 295.075 kb on + strand, within H281DRAFT_02155 at 295.076 kb on - strand, within H281DRAFT_02155 at 295.076 kb on - strand, within H281DRAFT_02155 at 295.076 kb on - strand, within H281DRAFT_02155 at 295.218 kb on + strand, within H281DRAFT_02155 at 295.218 kb on + strand, within H281DRAFT_02155 at 295.219 kb on - strand, within H281DRAFT_02155 at 295.219 kb on - strand, within H281DRAFT_02155 at 295.319 kb on + strand at 295.366 kb on + strand at 295.366 kb on + strand at 295.421 kb on + strand at 295.434 kb on + strand at 295.470 kb on + strand at 295.471 kb on - strand at 295.505 kb on + strand, within H281DRAFT_02156 at 295.505 kb on + strand, within H281DRAFT_02156 at 295.506 kb on - strand, within H281DRAFT_02156 at 295.612 kb on + strand, within H281DRAFT_02156 at 295.612 kb on + strand, within H281DRAFT_02156 at 295.612 kb on + strand, within H281DRAFT_02156 at 295.613 kb on - strand, within H281DRAFT_02156 at 295.750 kb on + strand, within H281DRAFT_02156 at 295.750 kb on + strand, within H281DRAFT_02156 at 295.751 kb on - strand, within H281DRAFT_02156 at 295.751 kb on - strand, within H281DRAFT_02156 at 295.774 kb on + strand, within H281DRAFT_02156 at 295.774 kb on + strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.775 kb on - strand, within H281DRAFT_02156 at 295.810 kb on + strand, within H281DRAFT_02156 at 295.810 kb on + strand, within H281DRAFT_02156 at 295.862 kb on + strand, within H281DRAFT_02156 at 295.863 kb on - strand, within H281DRAFT_02156 at 295.863 kb on - strand, within H281DRAFT_02156 at 295.907 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.948 kb on + strand at 295.949 kb on - strand at 295.949 kb on - strand at 295.949 kb on - strand at 295.949 kb on - strand at 295.967 kb on + strand at 296.067 kb on + strand at 296.067 kb on + strand at 296.067 kb on + strand at 296.068 kb on - strand at 296.068 kb on - strand at 296.068 kb on - strand at 296.068 kb on - strand at 296.168 kb on + strand at 296.168 kb on + strand at 296.169 kb on - strand at 296.307 kb on + strand, within H281DRAFT_02157 at 296.307 kb on + strand, within H281DRAFT_02157 at 296.307 kb on + strand, within H281DRAFT_02157 at 296.308 kb on - strand, within H281DRAFT_02157 at 296.499 kb on + strand, within H281DRAFT_02157 at 296.499 kb on + strand, within H281DRAFT_02157 at 296.499 kb on + strand, within H281DRAFT_02157 at 296.500 kb on - strand, within H281DRAFT_02157 at 296.500 kb on - strand, within H281DRAFT_02157 at 296.500 kb on - strand, within H281DRAFT_02157 at 296.500 kb on - strand at 296.500 kb on - strand, within H281DRAFT_02157 at 296.539 kb on + strand at 296.539 kb on + strand, within H281DRAFT_02157 at 296.539 kb on + strand, within H281DRAFT_02157 at 296.539 kb on + strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.540 kb on - strand, within H281DRAFT_02157 at 296.583 kb on - strand, within H281DRAFT_02157 at 296.708 kb on - strand, within H281DRAFT_02157 at 296.883 kb on + strand, within H281DRAFT_02157 at 296.883 kb on + strand, within H281DRAFT_02157 at 297.035 kb on + strand, within H281DRAFT_02157 at 297.036 kb on - strand, within H281DRAFT_02157 at 297.036 kb on - strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.061 kb on + strand, within H281DRAFT_02157 at 297.062 kb on - strand, within H281DRAFT_02157 at 297.062 kb on - strand, within H281DRAFT_02157 at 297.069 kb on + strand, within H281DRAFT_02157 at 297.070 kb on - strand, within H281DRAFT_02157 at 297.221 kb on + strand at 297.238 kb on + strand at 297.250 kb on + strand at 297.251 kb on - strand at 297.251 kb on - strand at 297.331 kb on + strand at 297.331 kb on + strand at 297.331 kb on + strand at 297.332 kb on - strand at 297.356 kb on - strand at 297.438 kb on - strand at 297.466 kb on - strand at 297.553 kb on + strand at 297.578 kb on + strand at 297.579 kb on - strand at 297.700 kb on - strand, within H281DRAFT_02158 at 297.746 kb on - strand, within H281DRAFT_02158 at 297.895 kb on - strand at 297.904 kb on + strand at 297.905 kb on - strand at 297.927 kb on - strand at 298.037 kb on - strand at 298.040 kb on - strand at 298.040 kb on - strand at 298.040 kb on - strand at 298.102 kb on - strand at 298.141 kb on - strand at 298.145 kb on - strand at 298.153 kb on - strand at 298.220 kb on + strand at 298.232 kb on + strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.233 kb on - strand at 298.238 kb on - strand at 298.296 kb on - strand at 298.303 kb on + strand at 298.304 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 295,075 + H281DRAFT_02155 0.53 -1.1 295,076 - H281DRAFT_02155 0.53 -0.9 295,076 - H281DRAFT_02155 0.53 +2.5 295,076 - H281DRAFT_02155 0.53 -1.7 295,218 + H281DRAFT_02155 0.76 +0.4 295,218 + H281DRAFT_02155 0.76 -0.7 295,219 - H281DRAFT_02155 0.76 +1.0 295,219 - H281DRAFT_02155 0.76 +0.1 295,319 + +0.3 295,366 + -1.0 295,366 + -0.4 295,421 + -1.1 295,434 + +0.2 295,470 + -0.4 295,471 - -0.8 295,505 + H281DRAFT_02156 0.10 -0.3 295,505 + H281DRAFT_02156 0.10 +0.2 295,506 - H281DRAFT_02156 0.10 -0.4 295,612 + H281DRAFT_02156 0.33 -0.8 295,612 + H281DRAFT_02156 0.33 +1.1 295,612 + H281DRAFT_02156 0.33 -0.4 295,613 - H281DRAFT_02156 0.34 +1.7 295,750 + H281DRAFT_02156 0.63 -0.2 295,750 + H281DRAFT_02156 0.63 -1.8 295,751 - H281DRAFT_02156 0.64 +0.2 295,751 - H281DRAFT_02156 0.64 +1.9 295,774 + H281DRAFT_02156 0.69 -2.7 295,774 + H281DRAFT_02156 0.69 +1.2 295,775 - H281DRAFT_02156 0.69 +0.8 295,775 - H281DRAFT_02156 0.69 +0.8 295,775 - H281DRAFT_02156 0.69 +0.8 295,775 - H281DRAFT_02156 0.69 +0.5 295,775 - H281DRAFT_02156 0.69 -0.5 295,810 + H281DRAFT_02156 0.76 -0.2 295,810 + H281DRAFT_02156 0.76 +0.9 295,862 + H281DRAFT_02156 0.88 -0.5 295,863 - H281DRAFT_02156 0.88 +1.0 295,863 - H281DRAFT_02156 0.88 -1.0 295,907 + +0.7 295,948 + +1.4 295,948 + +0.5 295,948 + -0.2 295,948 + +0.6 295,948 + +0.5 295,949 - +0.5 295,949 - -2.0 295,949 - -0.8 295,949 - +1.5 295,967 + -1.4 296,067 + -0.1 296,067 + -1.6 296,067 + -1.0 296,068 - +0.5 296,068 - +0.8 296,068 - -0.1 296,068 - +1.3 296,168 + -0.7 296,168 + -1.0 296,169 - +0.7 296,307 + H281DRAFT_02157 0.19 -1.8 296,307 + H281DRAFT_02157 0.19 -1.0 296,307 + H281DRAFT_02157 0.19 -1.0 296,308 - H281DRAFT_02157 0.20 +2.1 296,499 + H281DRAFT_02157 0.35 +0.1 296,499 + H281DRAFT_02157 0.35 -0.5 296,499 + H281DRAFT_02157 0.35 -2.0 296,500 - H281DRAFT_02157 0.35 +1.1 296,500 - H281DRAFT_02157 0.35 -1.7 296,500 - H281DRAFT_02157 0.35 -0.7 296,500 - -0.9 296,500 - H281DRAFT_02157 0.35 -1.1 296,539 + -0.4 296,539 + H281DRAFT_02157 0.38 -3.2 296,539 + H281DRAFT_02157 0.38 +0.2 296,539 + H281DRAFT_02157 0.38 -0.3 296,540 - H281DRAFT_02157 0.38 +0.7 296,540 - H281DRAFT_02157 0.38 -0.1 296,540 - H281DRAFT_02157 0.38 -0.9 296,540 - H281DRAFT_02157 0.38 +0.6 296,540 - H281DRAFT_02157 0.38 -0.6 296,583 - H281DRAFT_02157 0.42 +1.7 296,708 - H281DRAFT_02157 0.52 -3.6 296,883 + H281DRAFT_02157 0.66 -0.2 296,883 + H281DRAFT_02157 0.66 -3.1 297,035 + H281DRAFT_02157 0.78 -0.1 297,036 - H281DRAFT_02157 0.78 -0.1 297,036 - H281DRAFT_02157 0.78 -0.2 297,061 + H281DRAFT_02157 0.80 -1.4 297,061 + H281DRAFT_02157 0.80 -0.1 297,061 + H281DRAFT_02157 0.80 -3.1 297,061 + H281DRAFT_02157 0.80 +0.2 297,061 + H281DRAFT_02157 0.80 -0.6 297,062 - H281DRAFT_02157 0.80 -0.5 297,062 - H281DRAFT_02157 0.80 +0.6 297,069 + H281DRAFT_02157 0.81 -0.5 297,070 - H281DRAFT_02157 0.81 +0.4 297,221 + -0.2 297,238 + -0.1 297,250 + +0.6 297,251 - -0.4 297,251 - +1.2 297,331 + -0.2 297,331 + +0.6 297,331 + -0.4 297,332 - -2.4 297,356 - -0.8 297,438 - +0.7 297,466 - -0.3 297,553 + -0.2 297,578 + +0.0 297,579 - -1.0 297,700 - H281DRAFT_02158 0.32 -0.8 297,746 - H281DRAFT_02158 0.48 +2.6 297,895 - -0.4 297,904 + -0.5 297,905 - +1.5 297,927 - -0.1 298,037 - -1.2 298,040 - -3.1 298,040 - -1.2 298,040 - -1.3 298,102 - -0.7 298,141 - -0.2 298,145 - -1.1 298,153 - +0.1 298,220 + +0.5 298,232 + -0.2 298,233 - -0.3 298,233 - -0.2 298,233 - -0.5 298,233 - -0.2 298,233 - -0.1 298,238 - -1.4 298,296 - -1.8 298,303 + +0.9 298,304 - -0.1
Or see this region's nucleotide sequence