Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00500 and H281DRAFT_00501 are separated by 74 nucleotides H281DRAFT_00501 and H281DRAFT_00502 are separated by 221 nucleotides
H281DRAFT_00500: H281DRAFT_00500 - molecular chaperone Hsp33, at 561,739 to 562,686
_00500
H281DRAFT_00501: H281DRAFT_00501 - Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily, at 562,761 to 563,285
_00501
H281DRAFT_00502: H281DRAFT_00502 - Uncharacterized conserved protein, contains ferritin-like DUF455 domain, at 563,507 to 564,430
_00502
Position (kb) 562
563
564 Strain fitness (log2 ratio) -2
-1
0
1 at 562.220 kb on + strand, within H281DRAFT_00500 at 562.220 kb on + strand, within H281DRAFT_00500 at 562.220 kb on + strand, within H281DRAFT_00500 at 562.221 kb on - strand, within H281DRAFT_00500 at 562.221 kb on - strand, within H281DRAFT_00500 at 562.221 kb on - strand, within H281DRAFT_00500 at 562.597 kb on + strand at 562.614 kb on + strand at 562.721 kb on + strand at 562.721 kb on + strand at 562.810 kb on + strand at 562.810 kb on + strand at 562.810 kb on + strand at 562.810 kb on + strand at 562.811 kb on - strand at 562.811 kb on - strand at 562.909 kb on - strand, within H281DRAFT_00501 at 562.962 kb on + strand, within H281DRAFT_00501 at 563.034 kb on + strand, within H281DRAFT_00501 at 563.035 kb on - strand at 563.094 kb on + strand, within H281DRAFT_00501 at 563.094 kb on + strand, within H281DRAFT_00501 at 563.094 kb on + strand, within H281DRAFT_00501 at 563.094 kb on + strand, within H281DRAFT_00501 at 563.095 kb on - strand, within H281DRAFT_00501 at 563.095 kb on - strand, within H281DRAFT_00501 at 563.095 kb on - strand, within H281DRAFT_00501 at 563.095 kb on - strand, within H281DRAFT_00501 at 563.095 kb on - strand, within H281DRAFT_00501 at 563.095 kb on - strand, within H281DRAFT_00501 at 563.158 kb on - strand, within H281DRAFT_00501 at 563.235 kb on + strand at 563.235 kb on + strand at 563.275 kb on + strand at 563.275 kb on + strand at 563.276 kb on - strand at 563.404 kb on - strand at 563.477 kb on - strand at 563.666 kb on + strand, within H281DRAFT_00502 at 563.667 kb on - strand, within H281DRAFT_00502 at 563.667 kb on - strand, within H281DRAFT_00502 at 563.667 kb on - strand, within H281DRAFT_00502 at 563.909 kb on + strand, within H281DRAFT_00502 at 563.910 kb on - strand, within H281DRAFT_00502 at 563.982 kb on - strand, within H281DRAFT_00502 at 563.993 kb on + strand, within H281DRAFT_00502 at 563.993 kb on + strand, within H281DRAFT_00502 at 564.178 kb on - strand, within H281DRAFT_00502
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 562,220 + H281DRAFT_00500 0.51 -0.5 562,220 + H281DRAFT_00500 0.51 +0.2 562,220 + H281DRAFT_00500 0.51 -1.2 562,221 - H281DRAFT_00500 0.51 +0.3 562,221 - H281DRAFT_00500 0.51 +0.1 562,221 - H281DRAFT_00500 0.51 -0.2 562,597 + +1.7 562,614 + -0.8 562,721 + +0.6 562,721 + +0.5 562,810 + -1.3 562,810 + +1.1 562,810 + -0.2 562,810 + +0.4 562,811 - -0.5 562,811 - +0.2 562,909 - H281DRAFT_00501 0.28 -0.4 562,962 + H281DRAFT_00501 0.38 -1.6 563,034 + H281DRAFT_00501 0.52 +0.3 563,035 - -0.2 563,094 + H281DRAFT_00501 0.63 +0.2 563,094 + H281DRAFT_00501 0.63 +0.2 563,094 + H281DRAFT_00501 0.63 -1.1 563,094 + H281DRAFT_00501 0.63 -0.5 563,095 - H281DRAFT_00501 0.64 +0.1 563,095 - H281DRAFT_00501 0.64 +0.3 563,095 - H281DRAFT_00501 0.64 +0.3 563,095 - H281DRAFT_00501 0.64 -0.6 563,095 - H281DRAFT_00501 0.64 -0.2 563,095 - H281DRAFT_00501 0.64 -2.2 563,158 - H281DRAFT_00501 0.76 +0.2 563,235 + -1.3 563,235 + -0.4 563,275 + +0.3 563,275 + -0.8 563,276 - -2.6 563,404 - -0.1 563,477 - +0.1 563,666 + H281DRAFT_00502 0.17 -0.8 563,667 - H281DRAFT_00502 0.17 +0.3 563,667 - H281DRAFT_00502 0.17 +0.0 563,667 - H281DRAFT_00502 0.17 +0.1 563,909 + H281DRAFT_00502 0.44 -0.3 563,910 - H281DRAFT_00502 0.44 -0.1 563,982 - H281DRAFT_00502 0.51 -0.5 563,993 + H281DRAFT_00502 0.53 +1.1 563,993 + H281DRAFT_00502 0.53 -1.0 564,178 - H281DRAFT_00502 0.73 +0.4
Or see this region's nucleotide sequence