Experiment: Azelaic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00110 and H281DRAFT_00111 are separated by 15 nucleotides H281DRAFT_00111 and H281DRAFT_00112 are separated by 223 nucleotides
H281DRAFT_00110: H281DRAFT_00110 - hydrophobic/amphiphilic exporter-1, HAE1 family, at 114,529 to 117,723
_00110
H281DRAFT_00111: H281DRAFT_00111 - RND family efflux transporter, MFP subunit, at 117,739 to 118,962
_00111
H281DRAFT_00112: H281DRAFT_00112 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 119,186 to 120,346
_00112
Position (kb) 117
118
119 Strain fitness (log2 ratio) -2
-1
0
1
2 at 117.318 kb on + strand at 117.318 kb on + strand, within H281DRAFT_00110 at 117.319 kb on - strand, within H281DRAFT_00110 at 117.340 kb on + strand, within H281DRAFT_00110 at 117.653 kb on - strand at 117.653 kb on - strand at 117.849 kb on + strand at 117.850 kb on - strand at 117.850 kb on - strand at 117.850 kb on - strand at 118.013 kb on + strand, within H281DRAFT_00111 at 118.021 kb on - strand, within H281DRAFT_00111 at 118.092 kb on + strand, within H281DRAFT_00111 at 118.093 kb on - strand, within H281DRAFT_00111 at 118.151 kb on + strand, within H281DRAFT_00111 at 118.151 kb on + strand, within H281DRAFT_00111 at 118.152 kb on - strand, within H281DRAFT_00111 at 118.152 kb on - strand, within H281DRAFT_00111 at 118.213 kb on + strand, within H281DRAFT_00111 at 118.487 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111 at 118.767 kb on + strand, within H281DRAFT_00111 at 118.958 kb on - strand at 119.117 kb on + strand at 119.118 kb on - strand at 119.118 kb on - strand at 119.255 kb on + strand at 119.406 kb on + strand, within H281DRAFT_00112 at 119.455 kb on - strand, within H281DRAFT_00112 at 119.761 kb on + strand, within H281DRAFT_00112 at 119.762 kb on - strand, within H281DRAFT_00112 at 119.838 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112 at 119.892 kb on + strand, within H281DRAFT_00112
Per-strain Table
Position Strand Gene LocusTag Fraction Azelaic (C) remove 117,318 + -0.1 117,318 + H281DRAFT_00110 0.87 +0.1 117,319 - H281DRAFT_00110 0.87 -0.7 117,340 + H281DRAFT_00110 0.88 +0.5 117,653 - -0.4 117,653 - +0.1 117,849 + -0.1 117,850 - -1.0 117,850 - -0.1 117,850 - +0.9 118,013 + H281DRAFT_00111 0.22 +0.9 118,021 - H281DRAFT_00111 0.23 +0.4 118,092 + H281DRAFT_00111 0.29 -0.7 118,093 - H281DRAFT_00111 0.29 -1.4 118,151 + H281DRAFT_00111 0.34 +0.5 118,151 + H281DRAFT_00111 0.34 +0.5 118,152 - H281DRAFT_00111 0.34 -0.1 118,152 - H281DRAFT_00111 0.34 -0.1 118,213 + H281DRAFT_00111 0.39 -1.9 118,487 + H281DRAFT_00111 0.61 +0.5 118,634 + H281DRAFT_00111 0.73 +2.7 118,634 + H281DRAFT_00111 0.73 +0.9 118,767 + H281DRAFT_00111 0.84 -0.3 118,958 - +0.1 119,117 + -2.4 119,118 - +0.2 119,118 - -0.2 119,255 + -0.4 119,406 + H281DRAFT_00112 0.19 -0.4 119,455 - H281DRAFT_00112 0.23 +1.1 119,761 + H281DRAFT_00112 0.50 +0.7 119,762 - H281DRAFT_00112 0.50 +0.9 119,838 + H281DRAFT_00112 0.56 +0.3 119,892 + H281DRAFT_00112 0.61 -1.0 119,892 + H281DRAFT_00112 0.61 +0.4
Or see this region's nucleotide sequence