Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02806

Experiment: PYE 4C survival rep1 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 4C survival rep1 58 days
2,960,089	+		CCNA_03977	0.48	+0.1
2,960,090	-		CCNA_03977	0.49	-0.5
2,960,094	+		CCNA_03977	0.50	-1.2
2,960,096	-		CCNA_03977	0.51	+2.4
2,960,097	-		CCNA_03977	0.51	-0.9
2,960,120	+		CCNA_03977	0.60	-1.5
2,960,120	+		CCNA_03977	0.60	+1.6
2,960,130	+		CCNA_03977	0.64	+1.5
2,960,138	-		CCNA_03977	0.67	+0.2
2,960,138	-		CCNA_03977	0.67	+0.1
2,960,154	+		CCNA_03977	0.73	-2.1
2,960,154	+		CCNA_03977	0.73	+1.4
2,960,177	+		CCNA_03977	0.82	-2.7
2,960,246	+				+0.1
2,960,285	+				+0.7
2,960,344	-				+1.4
2,960,351	+				+1.4
2,960,371	+		CCNA_02804	0.13	-2.1
2,960,371	+		CCNA_02804	0.13	+0.9
2,960,371	+		CCNA_02804	0.13	+1.2
2,960,376	+		CCNA_02804	0.16	+0.3
2,960,376	+		CCNA_02804	0.16	-1.7
2,960,376	+		CCNA_02804	0.16	-0.9
2,960,376	+		CCNA_02804	0.16	+0.8
2,960,379	-				-1.1
2,960,379	-		CCNA_02804	0.17	+0.1
2,960,379	-		CCNA_02804	0.17	-1.3
2,960,384	-		CCNA_02804	0.20	+1.9
2,960,386	+		CCNA_02804	0.21	-3.0
2,960,405	-		CCNA_02804	0.30	-0.3
2,960,410	+		CCNA_02804	0.33	-1.0
2,960,413	-		CCNA_02804	0.34	+0.8
2,960,480	+		CCNA_02804	0.68	-2.3
2,960,483	+		CCNA_02804	0.69	+1.4
2,960,491	-		CCNA_02804	0.73	+0.6
2,960,493	-		CCNA_02804	0.74	+0.1
2,960,523	-		CCNA_02804	0.89	-1.3
2,960,555	+				-2.0
2,960,555	+				-0.2
2,960,575	+				-1.3
2,960,609	-				+0.5
2,960,631	-				+1.9
2,960,676	+		CCNA_02805	0.20	+0.4
2,960,684	-		CCNA_02805	0.22	+0.1
2,960,764	-		CCNA_02805	0.41	+0.1
2,960,776	+		CCNA_02805	0.44	-0.3
2,960,776	+		CCNA_02805	0.44	+0.4
2,960,815	-		CCNA_02805	0.54	-1.7
2,960,862	+		CCNA_02805	0.65	+0.5
2,960,902	+		CCNA_02805	0.75	+1.1
2,960,918	+		CCNA_02805	0.79	-0.4
2,960,918	+		CCNA_02805	0.79	+0.5
2,960,926	-		CCNA_02805	0.81	+0.4
2,960,972	-				+2.4
2,960,977	-				+0.4
2,961,100	+				-0.3
2,961,100	+				-0.2
2,961,100	+				-0.2
2,961,100	+				-0.7
2,961,100	+				+0.4
2,961,100	+				-0.2
2,961,100	+				+1.0
2,961,100	+				-0.3
2,961,100	+				-0.3
2,961,100	+				-0.8
2,961,100	+				-0.3
2,961,100	+				+1.0
2,961,100	+				-0.7
2,961,100	+				+1.9
2,961,100	+				-0.9
2,961,108	-				+1.4
2,961,108	-				+1.1
2,961,108	-				-1.7
2,961,108	-				-0.9
2,961,108	-				-2.3
2,961,108	-				+1.0
2,961,108	-				-0.5
2,961,108	-				-1.3
2,961,110	+				+0.2
2,961,159	+				+0.5
2,961,177	+				+1.3
2,961,179	+				+0.9
2,961,201	-		CCNA_02806	0.11	+0.1
2,961,216	-		CCNA_02806	0.13	-3.1
2,961,217	+		CCNA_02806	0.13	-0.4
2,961,217	+		CCNA_02806	0.13	-0.4
2,961,217	+		CCNA_02806	0.13	+1.4
2,961,217	+		CCNA_02806	0.13	+1.4
2,961,217	+		CCNA_02806	0.13	-0.2
2,961,217	+		CCNA_02806	0.13	-1.1
2,961,220	-		CCNA_02806	0.13	-0.2
2,961,225	-		CCNA_02806	0.13	-1.5
2,961,225	-		CCNA_02806	0.13	+0.8
2,961,229	+		CCNA_02806	0.14	+1.0
2,961,235	-		CCNA_02806	0.14	-0.7
2,961,367	-		CCNA_02806	0.25	-0.3
2,961,400	+		CCNA_02806	0.27	-0.7
2,961,481	+		CCNA_02806	0.34	-0.9
2,961,525	-		CCNA_02806	0.37	-0.8
2,961,557	-		CCNA_02806	0.40	-0.9
2,961,565	+		CCNA_02806	0.41	+1.4
2,961,594	+		CCNA_02806	0.43	-1.6
2,961,639	-		CCNA_02806	0.47	+0.5
2,961,657	+		CCNA_02806	0.48	+0.2
2,961,659	+		CCNA_02806	0.48	-0.8
2,961,659	+		CCNA_02806	0.48	-1.6
2,961,665	-		CCNA_02806	0.49	+0.3
2,961,687	+		CCNA_02806	0.51	-1.5
2,961,690	-		CCNA_02806	0.51	-0.9
2,961,693	+		CCNA_02806	0.51	-1.7
2,961,695	-		CCNA_02806	0.51	-1.6
2,961,732	+		CCNA_02806	0.54	+0.9
2,961,751	-		CCNA_02806	0.56	-0.8
2,961,803	-		CCNA_02806	0.60	+0.4
2,961,822	+		CCNA_02806	0.61	-0.2
2,961,825	-		CCNA_02806	0.62	+0.1
2,961,854	+		CCNA_02806	0.64	-1.9
2,961,854	+		CCNA_02806	0.64	-0.7
2,961,854	+		CCNA_02806	0.64	-2.3
2,961,854	+		CCNA_02806	0.64	+0.2
2,961,854	+		CCNA_02806	0.64	-0.4
2,961,862	-		CCNA_02806	0.65	+2.0
2,961,862	-		CCNA_02806	0.65	-1.4
2,961,862	-		CCNA_02806	0.65	-0.3
2,961,873	+		CCNA_02806	0.66	+0.5
2,961,881	-		CCNA_02806	0.66	-1.3
2,961,887	+		CCNA_02806	0.67	-1.6
2,961,940	-		CCNA_02806	0.71	-1.9
2,961,945	-		CCNA_02806	0.71	-1.7
2,961,981	+		CCNA_02806	0.74	-1.1
2,961,981	+		CCNA_02806	0.74	-3.2
2,961,995	+		CCNA_02806	0.75	+1.1
2,961,995	-		CCNA_02806	0.75	-0.3
2,961,995	-		CCNA_02806	0.75	+0.4
2,962,027	+		CCNA_02806	0.78	-1.2
2,962,040	-		CCNA_02806	0.79	-0.4
2,962,050	+		CCNA_02806	0.80	-0.6
2,962,058	-		CCNA_02806	0.80	+2.4
2,962,077	+		CCNA_02806	0.82	-2.0
2,962,077	+		CCNA_02806	0.82	-2.6
2,962,126	+		CCNA_02806	0.86	+0.2
2,962,134	-		CCNA_02806	0.87	-1.3
2,962,156	-		CCNA_02806	0.88	-0.2
2,962,164	+		CCNA_02806	0.89	+3.4
2,962,201	+				+5.4
2,962,206	-				-0.6
2,962,221	+				+0.8
2,962,221	+				+2.1
2,962,229	-				+1.1
2,962,229	-				+1.4
2,962,247	+				+2.1
2,962,265	-				+0.1
2,962,290	-				+0.1
2,962,301	-				+0.8
2,962,303	+				-0.9
2,962,366	+				-1.7
2,962,374	-				-1.5
2,962,379	-				-2.7
2,962,393	-				-1.4
2,962,486	+		CCNA_02807	0.15	-2.1
2,962,531	+		CCNA_02807	0.19	+1.6
2,962,591	-		CCNA_02807	0.24	+0.2
2,962,593	+		CCNA_02807	0.24	-0.6
2,962,612	+		CCNA_02807	0.26	-2.3
2,962,613	-		CCNA_02807	0.26	-0.2
2,962,613	-		CCNA_02807	0.26	-2.1
2,962,620	-		CCNA_02807	0.26	-1.5
2,962,635	-		CCNA_02807	0.27	-1.0
2,962,720	+		CCNA_02807	0.34	-1.9
2,962,759	+		CCNA_02807	0.37	+0.4
2,962,762	-		CCNA_02807	0.38	+2.4
2,962,767	-		CCNA_02807	0.38	-0.3
2,962,767	-		CCNA_02807	0.38	-2.7
2,962,795	-		CCNA_02807	0.40	-1.0
2,962,800	+		CCNA_02807	0.41	-2.0
2,962,827	-		CCNA_02807	0.43	-0.6
2,962,865	-		CCNA_02807	0.46	-2.9
2,962,899	+		CCNA_02807	0.49	-2.7
2,962,937	+		CCNA_02807	0.52	+1.4
2,962,957	+		CCNA_02807	0.53	-0.2
2,962,996	-		CCNA_02807	0.57	+0.1
2,963,050	-		CCNA_02807	0.61	-0.4
2,963,058	-		CCNA_02807	0.62	-1.7
2,963,224	+		CCNA_02807	0.75	-1.6
2,963,235	+		CCNA_02807	0.76	-0.9
2,963,265	-		CCNA_02807	0.78	-0.2