Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19365 and BWI76_RS19370 are separated by 438 nucleotides BWI76_RS19370 and BWI76_RS19375 are separated by 148 nucleotides BWI76_RS19375 and BWI76_RS19380 overlap by 4 nucleotides
BWI76_RS19365: BWI76_RS19365 - ribulokinase, at 4,035,482 to 4,037,089
_RS19365
BWI76_RS19370: BWI76_RS19370 - fructose-bisphosphate aldolase, at 4,037,528 to 4,038,580
_RS19370
BWI76_RS19375: BWI76_RS19375 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 4,038,729 to 4,039,529
_RS19375
BWI76_RS19380: BWI76_RS19380 - hydroxyethylthiazole kinase, at 4,039,526 to 4,040,299
_RS19380
Position (kb)
4037
4038
4039 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4036.947 kb on + strand at 4036.975 kb on + strand at 4037.014 kb on + strand at 4037.014 kb on + strand at 4037.014 kb on + strand at 4037.176 kb on - strand at 4037.176 kb on - strand at 4037.329 kb on - strand at 4037.397 kb on - strand at 4037.408 kb on + strand at 4037.571 kb on + strand at 4037.627 kb on + strand at 4037.820 kb on - strand, within BWI76_RS19370 at 4038.028 kb on - strand, within BWI76_RS19370 at 4038.091 kb on + strand, within BWI76_RS19370 at 4038.126 kb on - strand, within BWI76_RS19370 at 4038.128 kb on + strand, within BWI76_RS19370 at 4038.197 kb on + strand, within BWI76_RS19370 at 4038.347 kb on + strand, within BWI76_RS19370 at 4038.407 kb on + strand, within BWI76_RS19370 at 4038.413 kb on - strand, within BWI76_RS19370 at 4038.645 kb on + strand at 4038.645 kb on + strand at 4038.645 kb on + strand at 4038.645 kb on + strand at 4038.653 kb on - strand at 4038.653 kb on - strand at 4038.818 kb on - strand, within BWI76_RS19375 at 4038.976 kb on - strand, within BWI76_RS19375 at 4039.044 kb on + strand, within BWI76_RS19375 at 4039.493 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 4,036,947 + +0.2 4,036,975 + -0.4 4,037,014 + -1.5 4,037,014 + -0.1 4,037,014 + -0.0 4,037,176 - -0.5 4,037,176 - +0.1 4,037,329 - -1.2 4,037,397 - +0.7 4,037,408 + +0.4 4,037,571 + -0.7 4,037,627 + -2.9 4,037,820 - BWI76_RS19370 0.28 -1.3 4,038,028 - BWI76_RS19370 0.47 -1.2 4,038,091 + BWI76_RS19370 0.53 -1.7 4,038,126 - BWI76_RS19370 0.57 -2.0 4,038,128 + BWI76_RS19370 0.57 -1.7 4,038,197 + BWI76_RS19370 0.64 +0.1 4,038,347 + BWI76_RS19370 0.78 -1.8 4,038,407 + BWI76_RS19370 0.83 -3.5 4,038,413 - BWI76_RS19370 0.84 -1.4 4,038,645 + -0.5 4,038,645 + -1.6 4,038,645 + -3.0 4,038,645 + -1.8 4,038,653 - -0.9 4,038,653 - -1.0 4,038,818 - BWI76_RS19375 0.11 -2.3 4,038,976 - BWI76_RS19375 0.31 +0.3 4,039,044 + BWI76_RS19375 0.39 +0.5 4,039,493 - +0.1
Or see this region's nucleotide sequence