Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18550 and BWI76_RS18555 are separated by 124 nucleotides BWI76_RS18555 and BWI76_RS18560 are separated by 194 nucleotides BWI76_RS18560 and BWI76_RS18565 are separated by 53 nucleotides BWI76_RS18565 and BWI76_RS18570 are separated by 0 nucleotides
BWI76_RS18550: BWI76_RS18550 - tRNA-Asn, at 3,850,729 to 3,850,804
_RS18550
BWI76_RS18555: BWI76_RS18555 - MATE family multidrug exporter, at 3,850,929 to 3,852,386
_RS18555
BWI76_RS18560: BWI76_RS18560 - tRNA-Asn, at 3,852,581 to 3,852,656
_RS18560
BWI76_RS18565: BWI76_RS18565 - pemk protein, at 3,852,710 to 3,853,043
_RS18565
BWI76_RS18570: BWI76_RS18570 - hypothetical protein, at 3,853,044 to 3,853,247
_RS18570
Position (kb)
3850
3851
3852
3853 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3849.931 kb on + strand at 3849.931 kb on - strand at 3849.952 kb on + strand at 3849.959 kb on - strand at 3849.960 kb on - strand at 3849.965 kb on + strand at 3849.965 kb on + strand at 3849.965 kb on + strand at 3849.965 kb on + strand at 3849.965 kb on + strand at 3849.965 kb on + strand at 3849.965 kb on + strand at 3849.973 kb on - strand at 3849.973 kb on - strand at 3849.973 kb on - strand at 3849.973 kb on - strand at 3849.973 kb on - strand at 3850.008 kb on + strand at 3850.011 kb on - strand at 3850.219 kb on - strand at 3850.323 kb on + strand at 3850.329 kb on + strand at 3850.329 kb on + strand at 3850.336 kb on + strand at 3850.336 kb on + strand at 3850.342 kb on - strand at 3850.344 kb on - strand at 3850.344 kb on - strand at 3850.344 kb on - strand at 3850.348 kb on + strand at 3850.353 kb on + strand at 3850.357 kb on - strand at 3850.361 kb on - strand at 3850.375 kb on + strand at 3850.412 kb on + strand at 3850.412 kb on + strand at 3850.420 kb on - strand at 3850.420 kb on - strand at 3850.435 kb on - strand at 3850.446 kb on + strand at 3850.459 kb on - strand at 3850.471 kb on + strand at 3850.479 kb on - strand at 3850.498 kb on + strand at 3850.550 kb on - strand at 3850.573 kb on + strand at 3850.573 kb on + strand at 3850.573 kb on + strand at 3850.581 kb on - strand at 3850.592 kb on + strand at 3850.627 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.632 kb on + strand at 3850.636 kb on + strand at 3850.638 kb on + strand at 3850.638 kb on + strand at 3850.640 kb on - strand at 3850.640 kb on - strand at 3850.640 kb on - strand at 3850.640 kb on - strand at 3850.640 kb on - strand at 3850.640 kb on - strand at 3850.640 kb on - strand at 3850.640 kb on - strand at 3850.641 kb on + strand at 3850.641 kb on - strand at 3850.644 kb on - strand at 3850.648 kb on + strand at 3850.648 kb on + strand at 3850.753 kb on - strand, within BWI76_RS18550 at 3851.110 kb on - strand, within BWI76_RS18555 at 3851.180 kb on + strand, within BWI76_RS18555 at 3851.201 kb on - strand, within BWI76_RS18555 at 3851.272 kb on - strand, within BWI76_RS18555 at 3851.291 kb on - strand, within BWI76_RS18555 at 3851.380 kb on + strand, within BWI76_RS18555 at 3851.562 kb on + strand, within BWI76_RS18555 at 3851.641 kb on - strand, within BWI76_RS18555 at 3851.878 kb on + strand, within BWI76_RS18555 at 3851.910 kb on + strand, within BWI76_RS18555 at 3851.910 kb on + strand, within BWI76_RS18555 at 3851.918 kb on - strand, within BWI76_RS18555 at 3851.918 kb on - strand, within BWI76_RS18555 at 3851.947 kb on - strand, within BWI76_RS18555 at 3851.947 kb on - strand, within BWI76_RS18555 at 3851.955 kb on - strand, within BWI76_RS18555 at 3852.213 kb on - strand, within BWI76_RS18555 at 3852.251 kb on - strand at 3852.363 kb on + strand at 3852.381 kb on + strand at 3852.381 kb on - strand at 3852.415 kb on - strand at 3852.440 kb on + strand at 3852.505 kb on + strand at 3852.870 kb on + strand, within BWI76_RS18565 at 3852.971 kb on - strand, within BWI76_RS18565 at 3853.049 kb on - strand at 3853.231 kb on - strand at 3853.249 kb on + strand at 3853.262 kb on - strand at 3853.346 kb on + strand at 3853.379 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 3,849,931 + -0.5 3,849,931 - +0.7 3,849,952 + -0.3 3,849,959 - +0.6 3,849,960 - +0.5 3,849,965 + -0.0 3,849,965 + -1.7 3,849,965 + -0.1 3,849,965 + -0.4 3,849,965 + +0.4 3,849,965 + -0.5 3,849,965 + +0.0 3,849,973 - -0.4 3,849,973 - -0.0 3,849,973 - -0.1 3,849,973 - -0.8 3,849,973 - -0.6 3,850,008 + +0.4 3,850,011 - -0.1 3,850,219 - -0.4 3,850,323 + -0.4 3,850,329 + -0.5 3,850,329 + +0.0 3,850,336 + -0.5 3,850,336 + -0.5 3,850,342 - -0.1 3,850,344 - +0.4 3,850,344 - +0.4 3,850,344 - -0.6 3,850,348 + -1.2 3,850,353 + +0.7 3,850,357 - -1.1 3,850,361 - +0.2 3,850,375 + -0.9 3,850,412 + +2.4 3,850,412 + -0.6 3,850,420 - -0.9 3,850,420 - +0.0 3,850,435 - +2.6 3,850,446 + -0.5 3,850,459 - +0.4 3,850,471 + -0.5 3,850,479 - +1.0 3,850,498 + +0.5 3,850,550 - +0.5 3,850,573 + -0.4 3,850,573 + -1.0 3,850,573 + -0.7 3,850,581 - -0.5 3,850,592 + -1.2 3,850,627 + -0.4 3,850,632 + -0.0 3,850,632 + -0.1 3,850,632 + +0.3 3,850,632 + +0.4 3,850,632 + +0.2 3,850,632 + +0.1 3,850,632 + -0.8 3,850,632 + +0.2 3,850,632 + -0.1 3,850,632 + -0.2 3,850,632 + -0.3 3,850,632 + -0.1 3,850,632 + -0.3 3,850,636 + +0.1 3,850,638 + +0.1 3,850,638 + +0.3 3,850,640 - -0.2 3,850,640 - +0.0 3,850,640 - -0.3 3,850,640 - -0.6 3,850,640 - -0.6 3,850,640 - -0.4 3,850,640 - -0.6 3,850,640 - +0.1 3,850,641 + +2.0 3,850,641 - +0.4 3,850,644 - -0.6 3,850,648 + -0.4 3,850,648 + -0.1 3,850,753 - BWI76_RS18550 0.32 -0.2 3,851,110 - BWI76_RS18555 0.12 -2.5 3,851,180 + BWI76_RS18555 0.17 +2.4 3,851,201 - BWI76_RS18555 0.19 -1.8 3,851,272 - BWI76_RS18555 0.24 -2.3 3,851,291 - BWI76_RS18555 0.25 -1.2 3,851,380 + BWI76_RS18555 0.31 -1.5 3,851,562 + BWI76_RS18555 0.43 -1.3 3,851,641 - BWI76_RS18555 0.49 -1.2 3,851,878 + BWI76_RS18555 0.65 -1.8 3,851,910 + BWI76_RS18555 0.67 -2.1 3,851,910 + BWI76_RS18555 0.67 -2.5 3,851,918 - BWI76_RS18555 0.68 -0.8 3,851,918 - BWI76_RS18555 0.68 -1.6 3,851,947 - BWI76_RS18555 0.70 -2.2 3,851,947 - BWI76_RS18555 0.70 -1.6 3,851,955 - BWI76_RS18555 0.70 -2.3 3,852,213 - BWI76_RS18555 0.88 -0.6 3,852,251 - -1.4 3,852,363 + -0.2 3,852,381 + -2.6 3,852,381 - -1.3 3,852,415 - -1.7 3,852,440 + -1.4 3,852,505 + -0.0 3,852,870 + BWI76_RS18565 0.48 +0.4 3,852,971 - BWI76_RS18565 0.78 -0.2 3,853,049 - +0.6 3,853,231 - -1.9 3,853,249 + -0.6 3,853,262 - +0.2 3,853,346 + -0.2 3,853,379 + -0.1
Or see this region's nucleotide sequence