Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10705 and BWI76_RS10710 are separated by 212 nucleotides BWI76_RS10710 and BWI76_RS10715 are separated by 171 nucleotides BWI76_RS10715 and BWI76_RS10720 overlap by 11 nucleotides
BWI76_RS10705: BWI76_RS10705 - Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) , at 2,262,446 to 2,263,210
_RS10705
BWI76_RS10710: BWI76_RS10710 - Glutamate--putrescine ligase (EC 6.3.1.11) (from data) , at 2,263,423 to 2,264,841
_RS10710
BWI76_RS10715: BWI76_RS10715 - hypothetical protein, at 2,265,013 to 2,265,201
_RS10715
BWI76_RS10720: BWI76_RS10720 - putrescine importer, at 2,265,191 to 2,266,582
_RS10720
Position (kb)
2263
2264
2265 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2262.473 kb on + strand at 2262.543 kb on + strand, within BWI76_RS10705 at 2262.563 kb on + strand, within BWI76_RS10705 at 2262.639 kb on - strand, within BWI76_RS10705 at 2262.796 kb on - strand, within BWI76_RS10705 at 2262.916 kb on + strand, within BWI76_RS10705 at 2262.928 kb on + strand, within BWI76_RS10705 at 2263.134 kb on + strand at 2263.506 kb on + strand at 2263.506 kb on + strand at 2264.061 kb on + strand, within BWI76_RS10710 at 2264.127 kb on + strand, within BWI76_RS10710 at 2264.135 kb on + strand, within BWI76_RS10710 at 2264.266 kb on + strand, within BWI76_RS10710 at 2264.645 kb on + strand, within BWI76_RS10710 at 2264.650 kb on + strand, within BWI76_RS10710 at 2264.949 kb on + strand at 2264.949 kb on + strand at 2264.990 kb on - strand at 2264.994 kb on + strand at 2265.219 kb on + strand at 2265.219 kb on + strand at 2265.260 kb on - strand at 2265.446 kb on + strand, within BWI76_RS10720 at 2265.522 kb on - strand, within BWI76_RS10720 at 2265.582 kb on - strand, within BWI76_RS10720 at 2265.602 kb on - strand, within BWI76_RS10720
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 2,262,473 + +3.0 2,262,543 + BWI76_RS10705 0.13 +1.2 2,262,563 + BWI76_RS10705 0.15 +3.1 2,262,639 - BWI76_RS10705 0.25 +0.8 2,262,796 - BWI76_RS10705 0.46 -0.4 2,262,916 + BWI76_RS10705 0.61 +0.1 2,262,928 + BWI76_RS10705 0.63 -0.1 2,263,134 + -0.8 2,263,506 + -0.0 2,263,506 + -0.7 2,264,061 + BWI76_RS10710 0.45 -0.4 2,264,127 + BWI76_RS10710 0.50 -1.1 2,264,135 + BWI76_RS10710 0.50 -0.3 2,264,266 + BWI76_RS10710 0.59 -0.8 2,264,645 + BWI76_RS10710 0.86 -0.8 2,264,650 + BWI76_RS10710 0.86 -0.9 2,264,949 + -1.3 2,264,949 + -0.7 2,264,990 - -0.1 2,264,994 + -0.6 2,265,219 + -0.5 2,265,219 + -0.1 2,265,260 - -0.2 2,265,446 + BWI76_RS10720 0.18 +0.2 2,265,522 - BWI76_RS10720 0.24 +0.2 2,265,582 - BWI76_RS10720 0.28 +0.2 2,265,602 - BWI76_RS10720 0.30 +0.4
Or see this region's nucleotide sequence