Experiment: Nickel (II) chloride 1.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01720 and BWI76_RS01725 are separated by 123 nucleotides BWI76_RS01725 and BWI76_RS01730 are separated by 11 nucleotides BWI76_RS01730 and BWI76_RS01735 are separated by 188 nucleotides
BWI76_RS01720: BWI76_RS01720 - L-sorbose 1-phosphate reductase (EC 1.1.1.-) <small>(from data)</small>, at 352,507 to 353,736
_RS01720
BWI76_RS01725: BWI76_RS01725 - PTS mannose/fructose/sorbose family transporter subunit IID, at 353,860 to 354,684
_RS01725
BWI76_RS01730: BWI76_RS01730 - PTS mannose/fructose/sorbose transporter subunit IIC, at 354,696 to 355,493
_RS01730
BWI76_RS01735: BWI76_RS01735 - PTS mannose/fructose/sorbose family transporter subunit IIB, at 355,682 to 356,176
_RS01735
Position (kb) 353
354
355 Strain fitness (log2 ratio) -2
-1
0
1
2 at 352.930 kb on + strand, within BWI76_RS01720 at 353.173 kb on + strand, within BWI76_RS01720 at 353.189 kb on + strand, within BWI76_RS01720 at 353.450 kb on - strand, within BWI76_RS01720 at 353.467 kb on + strand, within BWI76_RS01720 at 353.467 kb on + strand, within BWI76_RS01720 at 353.721 kb on + strand at 353.748 kb on + strand at 353.815 kb on + strand at 353.942 kb on - strand at 353.951 kb on + strand, within BWI76_RS01725 at 353.978 kb on - strand, within BWI76_RS01725 at 353.985 kb on + strand, within BWI76_RS01725 at 353.990 kb on + strand, within BWI76_RS01725 at 354.077 kb on - strand, within BWI76_RS01725 at 354.134 kb on - strand, within BWI76_RS01725 at 354.182 kb on + strand, within BWI76_RS01725 at 354.223 kb on + strand, within BWI76_RS01725 at 354.335 kb on + strand, within BWI76_RS01725 at 354.477 kb on + strand, within BWI76_RS01725 at 354.718 kb on - strand at 354.769 kb on - strand at 354.784 kb on - strand, within BWI76_RS01730 at 354.786 kb on - strand, within BWI76_RS01730 at 354.801 kb on - strand, within BWI76_RS01730 at 354.905 kb on + strand, within BWI76_RS01730 at 354.926 kb on + strand, within BWI76_RS01730 at 355.001 kb on - strand, within BWI76_RS01730 at 355.001 kb on - strand, within BWI76_RS01730 at 355.008 kb on + strand, within BWI76_RS01730 at 355.057 kb on - strand, within BWI76_RS01730 at 355.114 kb on + strand, within BWI76_RS01730 at 355.148 kb on + strand, within BWI76_RS01730 at 355.148 kb on + strand, within BWI76_RS01730 at 355.156 kb on - strand, within BWI76_RS01730 at 355.169 kb on + strand, within BWI76_RS01730 at 355.178 kb on - strand, within BWI76_RS01730 at 355.253 kb on + strand, within BWI76_RS01730 at 355.263 kb on + strand, within BWI76_RS01730 at 355.301 kb on + strand, within BWI76_RS01730 at 355.320 kb on - strand, within BWI76_RS01730 at 355.322 kb on + strand, within BWI76_RS01730 at 355.322 kb on + strand, within BWI76_RS01730 at 355.322 kb on + strand, within BWI76_RS01730 at 355.330 kb on - strand, within BWI76_RS01730 at 355.330 kb on - strand, within BWI76_RS01730 at 355.330 kb on - strand, within BWI76_RS01730 at 355.330 kb on - strand, within BWI76_RS01730 at 355.330 kb on - strand, within BWI76_RS01730 at 355.330 kb on - strand, within BWI76_RS01730 at 355.340 kb on + strand, within BWI76_RS01730 at 355.340 kb on + strand, within BWI76_RS01730 at 355.348 kb on - strand, within BWI76_RS01730 at 355.348 kb on - strand, within BWI76_RS01730 at 355.348 kb on - strand, within BWI76_RS01730 at 355.367 kb on + strand, within BWI76_RS01730 at 355.367 kb on + strand, within BWI76_RS01730 at 355.375 kb on - strand, within BWI76_RS01730 at 355.375 kb on - strand, within BWI76_RS01730 at 355.382 kb on + strand, within BWI76_RS01730 at 355.382 kb on + strand, within BWI76_RS01730 at 355.390 kb on - strand, within BWI76_RS01730 at 355.390 kb on - strand at 355.390 kb on - strand, within BWI76_RS01730 at 355.390 kb on - strand, within BWI76_RS01730 at 355.393 kb on + strand, within BWI76_RS01730 at 355.400 kb on + strand, within BWI76_RS01730 at 355.408 kb on + strand, within BWI76_RS01730 at 355.408 kb on + strand, within BWI76_RS01730 at 355.408 kb on + strand, within BWI76_RS01730 at 355.408 kb on + strand, within BWI76_RS01730 at 355.408 kb on + strand, within BWI76_RS01730 at 355.408 kb on - strand, within BWI76_RS01730 at 355.414 kb on + strand at 355.416 kb on - strand at 355.416 kb on - strand at 355.416 kb on - strand at 355.416 kb on - strand at 355.421 kb on - strand at 355.425 kb on - strand at 355.429 kb on + strand at 355.432 kb on - strand at 355.434 kb on - strand at 355.437 kb on + strand at 355.439 kb on + strand at 355.509 kb on + strand at 355.509 kb on + strand at 355.509 kb on + strand at 355.510 kb on + strand at 355.511 kb on + strand at 355.511 kb on - strand at 355.517 kb on - strand at 355.517 kb on - strand at 355.517 kb on - strand at 355.519 kb on - strand at 355.537 kb on - strand at 355.545 kb on - strand at 355.546 kb on + strand at 355.546 kb on - strand at 355.548 kb on + strand at 355.548 kb on + strand at 355.548 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.550 kb on + strand at 355.556 kb on - strand at 355.556 kb on - strand at 355.556 kb on - strand at 355.556 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.558 kb on - strand at 355.560 kb on + strand at 355.570 kb on + strand at 355.575 kb on + strand at 355.585 kb on + strand at 355.591 kb on + strand at 355.595 kb on + strand at 355.599 kb on + strand at 355.599 kb on - strand at 355.604 kb on - strand at 355.609 kb on + strand at 355.609 kb on - strand at 355.611 kb on + strand at 355.617 kb on - strand at 355.619 kb on - strand at 355.619 kb on - strand at 355.619 kb on - strand at 355.642 kb on + strand at 355.646 kb on - strand at 355.648 kb on + strand at 355.656 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1.5 mM remove 352,930 + BWI76_RS01720 0.34 -0.7 353,173 + BWI76_RS01720 0.54 +0.2 353,189 + BWI76_RS01720 0.55 +0.2 353,450 - BWI76_RS01720 0.77 -0.2 353,467 + BWI76_RS01720 0.78 -0.4 353,467 + BWI76_RS01720 0.78 -0.1 353,721 + +0.3 353,748 + +0.7 353,815 + -0.1 353,942 - +1.0 353,951 + BWI76_RS01725 0.11 +0.4 353,978 - BWI76_RS01725 0.14 +0.4 353,985 + BWI76_RS01725 0.15 -0.0 353,990 + BWI76_RS01725 0.16 -0.2 354,077 - BWI76_RS01725 0.26 -0.1 354,134 - BWI76_RS01725 0.33 -0.4 354,182 + BWI76_RS01725 0.39 +0.6 354,223 + BWI76_RS01725 0.44 +1.3 354,335 + BWI76_RS01725 0.58 +0.1 354,477 + BWI76_RS01725 0.75 -0.4 354,718 - -0.4 354,769 - -0.3 354,784 - BWI76_RS01730 0.11 +0.3 354,786 - BWI76_RS01730 0.11 -0.7 354,801 - BWI76_RS01730 0.13 +0.0 354,905 + BWI76_RS01730 0.26 -0.1 354,926 + BWI76_RS01730 0.29 -0.4 355,001 - BWI76_RS01730 0.38 +0.1 355,001 - BWI76_RS01730 0.38 -0.0 355,008 + BWI76_RS01730 0.39 -0.1 355,057 - BWI76_RS01730 0.45 -0.9 355,114 + BWI76_RS01730 0.52 +0.5 355,148 + BWI76_RS01730 0.57 -0.0 355,148 + BWI76_RS01730 0.57 +0.3 355,156 - BWI76_RS01730 0.58 +0.1 355,169 + BWI76_RS01730 0.59 -0.1 355,178 - BWI76_RS01730 0.60 -0.0 355,253 + BWI76_RS01730 0.70 +2.6 355,263 + BWI76_RS01730 0.71 +0.1 355,301 + BWI76_RS01730 0.76 -0.5 355,320 - BWI76_RS01730 0.78 +0.4 355,322 + BWI76_RS01730 0.78 -0.1 355,322 + BWI76_RS01730 0.78 +0.6 355,322 + BWI76_RS01730 0.78 +0.8 355,330 - BWI76_RS01730 0.79 -1.5 355,330 - BWI76_RS01730 0.79 -0.3 355,330 - BWI76_RS01730 0.79 -0.3 355,330 - BWI76_RS01730 0.79 +0.8 355,330 - BWI76_RS01730 0.79 -0.3 355,330 - BWI76_RS01730 0.79 +0.1 355,340 + BWI76_RS01730 0.81 +0.6 355,340 + BWI76_RS01730 0.81 -0.1 355,348 - BWI76_RS01730 0.82 -0.9 355,348 - BWI76_RS01730 0.82 +0.3 355,348 - BWI76_RS01730 0.82 +0.3 355,367 + BWI76_RS01730 0.84 +0.6 355,367 + BWI76_RS01730 0.84 -0.1 355,375 - BWI76_RS01730 0.85 +0.0 355,375 - BWI76_RS01730 0.85 -0.6 355,382 + BWI76_RS01730 0.86 +0.1 355,382 + BWI76_RS01730 0.86 +0.2 355,390 - BWI76_RS01730 0.87 -0.1 355,390 - +0.6 355,390 - BWI76_RS01730 0.87 -0.0 355,390 - BWI76_RS01730 0.87 -0.9 355,393 + BWI76_RS01730 0.87 -0.6 355,400 + BWI76_RS01730 0.88 -0.0 355,408 + BWI76_RS01730 0.89 +0.0 355,408 + BWI76_RS01730 0.89 -0.7 355,408 + BWI76_RS01730 0.89 -0.5 355,408 + BWI76_RS01730 0.89 +0.4 355,408 + BWI76_RS01730 0.89 +1.9 355,408 - BWI76_RS01730 0.89 -0.8 355,414 + +0.4 355,416 - -0.2 355,416 - +0.2 355,416 - +0.2 355,416 - +0.2 355,421 - -0.4 355,425 - +0.3 355,429 + -0.9 355,432 - -0.4 355,434 - +0.7 355,437 + -0.6 355,439 + -0.5 355,509 + -0.6 355,509 + +0.3 355,509 + -0.6 355,510 + +0.6 355,511 + +0.5 355,511 - +0.4 355,517 - +0.2 355,517 - -0.6 355,517 - -0.0 355,519 - -0.4 355,537 - -0.0 355,545 - -0.1 355,546 + -0.6 355,546 - -1.0 355,548 + -0.5 355,548 + +2.2 355,548 + +0.2 355,550 + +0.2 355,550 + +0.3 355,550 + +0.1 355,550 + -0.1 355,550 + -0.2 355,550 + +0.3 355,550 + +0.4 355,550 + -0.6 355,550 + +0.2 355,550 + -0.6 355,550 + +0.4 355,550 + +0.7 355,550 + -1.0 355,550 + -0.2 355,550 + +0.4 355,550 + -0.1 355,550 + +0.1 355,550 + +0.4 355,550 + +0.1 355,550 + -0.7 355,550 + +0.2 355,550 + -0.1 355,550 + -0.1 355,550 + -0.4 355,550 + +0.3 355,550 + +0.6 355,550 + +0.4 355,550 + -1.1 355,556 - +0.2 355,556 - +0.9 355,556 - -0.0 355,556 - -0.1 355,558 - -1.6 355,558 - -0.6 355,558 - -0.1 355,558 - -0.9 355,558 - -0.4 355,558 - -0.2 355,558 - -0.2 355,558 - +0.3 355,558 - +0.7 355,558 - +0.2 355,558 - +0.5 355,558 - +0.3 355,558 - +1.1 355,558 - -0.6 355,558 - +0.2 355,558 - +1.0 355,558 - +0.3 355,558 - -0.8 355,558 - -2.4 355,558 - +0.5 355,558 - -0.3 355,558 - -0.3 355,558 - -0.4 355,558 - +0.2 355,558 - -2.0 355,558 - -0.4 355,560 + -0.4 355,570 + +0.9 355,575 + -0.4 355,585 + +0.8 355,591 + +0.2 355,595 + -0.6 355,599 + -0.2 355,599 - +0.2 355,604 - +1.3 355,609 + +0.1 355,609 - -0.5 355,611 + +0.3 355,617 - -0.5 355,619 - -0.6 355,619 - +0.8 355,619 - +0.5 355,642 + +0.6 355,646 - +0.7 355,648 + +0.2 355,656 - -0.3
Or see this region's nucleotide sequence