Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_926 and Pf6N2E2_927 are separated by 722 nucleotides Pf6N2E2_927 and Pf6N2E2_928 are separated by 250 nucleotides Pf6N2E2_928 and Pf6N2E2_929 are separated by 245 nucleotides
Pf6N2E2_926 - NADH dehydrogenase (EC 1.6.99.3), at 1,090,375 to 1,091,172
_926
Pf6N2E2_927 - (AJ250023) putative polyketide synthase, at 1,091,895 to 1,092,041
_927
Pf6N2E2_928 - Copper metallochaperone, bacterial analog of Cox17 protein, at 1,092,292 to 1,092,534
_928
Pf6N2E2_929 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 1,092,780 to 1,093,382
_929
Position (kb)
1091
1092
1093 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1090.895 kb on + strand, within Pf6N2E2_926 at 1090.948 kb on + strand, within Pf6N2E2_926 at 1090.949 kb on - strand, within Pf6N2E2_926 at 1090.949 kb on - strand, within Pf6N2E2_926 at 1090.964 kb on + strand, within Pf6N2E2_926 at 1090.998 kb on - strand, within Pf6N2E2_926 at 1091.020 kb on + strand, within Pf6N2E2_926 at 1091.028 kb on + strand, within Pf6N2E2_926 at 1091.028 kb on + strand, within Pf6N2E2_926 at 1091.045 kb on + strand, within Pf6N2E2_926 at 1091.046 kb on - strand, within Pf6N2E2_926 at 1091.046 kb on - strand, within Pf6N2E2_926 at 1091.046 kb on - strand, within Pf6N2E2_926 at 1091.127 kb on + strand at 1091.180 kb on + strand at 1091.181 kb on - strand at 1091.184 kb on + strand at 1091.241 kb on + strand at 1091.241 kb on + strand at 1091.242 kb on - strand at 1091.242 kb on - strand at 1091.274 kb on + strand at 1091.274 kb on + strand at 1091.274 kb on + strand at 1091.275 kb on - strand at 1091.275 kb on - strand at 1091.275 kb on - strand at 1091.279 kb on - strand at 1091.287 kb on + strand at 1091.287 kb on + strand at 1091.288 kb on - strand at 1091.291 kb on + strand at 1091.292 kb on - strand at 1091.336 kb on + strand at 1091.580 kb on + strand at 1091.607 kb on - strand at 1091.699 kb on + strand at 1091.699 kb on + strand at 1091.732 kb on + strand at 1091.732 kb on + strand at 1091.743 kb on + strand at 1091.743 kb on + strand at 1091.743 kb on + strand at 1091.743 kb on + strand at 1091.743 kb on + strand at 1091.749 kb on + strand at 1091.750 kb on - strand at 1091.750 kb on - strand at 1091.750 kb on - strand at 1091.756 kb on - strand at 1091.768 kb on + strand at 1091.769 kb on - strand at 1091.797 kb on + strand at 1091.797 kb on + strand at 1091.797 kb on + strand at 1091.797 kb on + strand at 1091.797 kb on + strand at 1091.798 kb on - strand at 1091.816 kb on + strand at 1091.868 kb on - strand at 1091.877 kb on + strand at 1091.877 kb on + strand at 1091.878 kb on - strand at 1091.959 kb on + strand, within Pf6N2E2_927 at 1091.959 kb on + strand, within Pf6N2E2_927 at 1091.996 kb on + strand, within Pf6N2E2_927 at 1091.997 kb on - strand, within Pf6N2E2_927 at 1092.064 kb on + strand at 1092.064 kb on + strand at 1092.064 kb on + strand at 1092.065 kb on - strand at 1092.065 kb on - strand at 1092.068 kb on + strand at 1092.068 kb on + strand at 1092.069 kb on - strand at 1092.069 kb on - strand at 1092.069 kb on - strand at 1092.080 kb on + strand at 1092.080 kb on + strand at 1092.080 kb on + strand at 1092.080 kb on + strand at 1092.080 kb on + strand at 1092.081 kb on - strand at 1092.110 kb on + strand at 1092.110 kb on + strand at 1092.111 kb on - strand at 1092.111 kb on - strand at 1092.111 kb on - strand at 1092.111 kb on - strand at 1092.114 kb on + strand at 1092.114 kb on + strand at 1092.114 kb on + strand at 1092.189 kb on + strand at 1092.190 kb on - strand at 1092.190 kb on - strand at 1092.294 kb on - strand at 1092.294 kb on - strand at 1092.433 kb on + strand, within Pf6N2E2_928 at 1092.434 kb on - strand, within Pf6N2E2_928 at 1092.434 kb on - strand, within Pf6N2E2_928 at 1092.434 kb on - strand, within Pf6N2E2_928 at 1092.513 kb on + strand at 1092.513 kb on + strand at 1092.514 kb on - strand at 1092.591 kb on + strand at 1092.592 kb on - strand at 1092.601 kb on - strand at 1092.609 kb on + strand at 1092.609 kb on + strand at 1092.610 kb on - strand at 1092.610 kb on - strand at 1092.610 kb on - strand at 1092.792 kb on - strand at 1092.792 kb on - strand at 1092.804 kb on + strand at 1092.804 kb on + strand at 1092.805 kb on - strand at 1092.805 kb on - strand at 1092.805 kb on - strand at 1092.874 kb on + strand, within Pf6N2E2_929 at 1092.874 kb on + strand, within Pf6N2E2_929 at 1092.874 kb on + strand at 1092.875 kb on - strand, within Pf6N2E2_929 at 1092.880 kb on + strand, within Pf6N2E2_929 at 1092.880 kb on + strand, within Pf6N2E2_929 at 1092.880 kb on + strand, within Pf6N2E2_929 at 1092.880 kb on + strand, within Pf6N2E2_929 at 1092.880 kb on + strand, within Pf6N2E2_929 at 1092.880 kb on + strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.881 kb on - strand, within Pf6N2E2_929 at 1092.907 kb on + strand, within Pf6N2E2_929 at 1092.907 kb on + strand, within Pf6N2E2_929 at 1092.907 kb on + strand, within Pf6N2E2_929 at 1092.908 kb on - strand, within Pf6N2E2_929 at 1092.908 kb on - strand, within Pf6N2E2_929 at 1092.908 kb on - strand, within Pf6N2E2_929 at 1092.908 kb on - strand, within Pf6N2E2_929 at 1092.935 kb on - strand, within Pf6N2E2_929 at 1092.935 kb on - strand, within Pf6N2E2_929 at 1092.986 kb on - strand, within Pf6N2E2_929 at 1092.986 kb on - strand at 1092.986 kb on - strand, within Pf6N2E2_929 at 1093.021 kb on + strand, within Pf6N2E2_929 at 1093.022 kb on - strand, within Pf6N2E2_929 at 1093.022 kb on - strand, within Pf6N2E2_929 at 1093.022 kb on - strand, within Pf6N2E2_929 at 1093.022 kb on - strand, within Pf6N2E2_929
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 1,090,895 + Pf6N2E2_926 0.65 -1.9 1,090,948 + Pf6N2E2_926 0.72 +1.7 1,090,949 - Pf6N2E2_926 0.72 -0.9 1,090,949 - Pf6N2E2_926 0.72 +0.5 1,090,964 + Pf6N2E2_926 0.74 +0.3 1,090,998 - Pf6N2E2_926 0.78 -2.0 1,091,020 + Pf6N2E2_926 0.81 -0.3 1,091,028 + Pf6N2E2_926 0.82 +0.8 1,091,028 + Pf6N2E2_926 0.82 -0.5 1,091,045 + Pf6N2E2_926 0.84 -3.0 1,091,046 - Pf6N2E2_926 0.84 -0.9 1,091,046 - Pf6N2E2_926 0.84 +1.7 1,091,046 - Pf6N2E2_926 0.84 +1.8 1,091,127 + -1.1 1,091,180 + -0.6 1,091,181 - +0.8 1,091,184 + +2.0 1,091,241 + -0.2 1,091,241 + -1.7 1,091,242 - +0.3 1,091,242 - +0.9 1,091,274 + +0.8 1,091,274 + +0.7 1,091,274 + -2.9 1,091,275 - -0.7 1,091,275 - +0.3 1,091,275 - +0.9 1,091,279 - +1.2 1,091,287 + +0.4 1,091,287 + +1.1 1,091,288 - +0.6 1,091,291 + -0.2 1,091,292 - -1.4 1,091,336 + +0.7 1,091,580 + +1.6 1,091,607 - +0.4 1,091,699 + -0.5 1,091,699 + -2.4 1,091,732 + +1.6 1,091,732 + +0.1 1,091,743 + -1.6 1,091,743 + -0.7 1,091,743 + +0.2 1,091,743 + -1.2 1,091,743 + +1.4 1,091,749 + -0.3 1,091,750 - -1.8 1,091,750 - +0.1 1,091,750 - +1.9 1,091,756 - -0.5 1,091,768 + +0.5 1,091,769 - -1.3 1,091,797 + -0.6 1,091,797 + -0.1 1,091,797 + +0.9 1,091,797 + -1.4 1,091,797 + +2.2 1,091,798 - +2.1 1,091,816 + +0.5 1,091,868 - +0.1 1,091,877 + +1.5 1,091,877 + +0.3 1,091,878 - -0.8 1,091,959 + Pf6N2E2_927 0.44 -0.8 1,091,959 + Pf6N2E2_927 0.44 -0.9 1,091,996 + Pf6N2E2_927 0.69 -3.3 1,091,997 - Pf6N2E2_927 0.69 -0.8 1,092,064 + +0.9 1,092,064 + -1.6 1,092,064 + -0.3 1,092,065 - +0.2 1,092,065 - +0.4 1,092,068 + +0.1 1,092,068 + -0.3 1,092,069 - +1.5 1,092,069 - +0.5 1,092,069 - +1.1 1,092,080 + -0.8 1,092,080 + -0.8 1,092,080 + -1.1 1,092,080 + -0.6 1,092,080 + -0.3 1,092,081 - -0.4 1,092,110 + -0.6 1,092,110 + -0.8 1,092,111 - -2.3 1,092,111 - +1.5 1,092,111 - +1.2 1,092,111 - -0.8 1,092,114 + -0.6 1,092,114 + -0.5 1,092,114 + +0.1 1,092,189 + +0.9 1,092,190 - -2.6 1,092,190 - -0.5 1,092,294 - +0.7 1,092,294 - +0.1 1,092,433 + Pf6N2E2_928 0.58 +0.7 1,092,434 - Pf6N2E2_928 0.58 -0.3 1,092,434 - Pf6N2E2_928 0.58 -2.5 1,092,434 - Pf6N2E2_928 0.58 -0.0 1,092,513 + +0.7 1,092,513 + -0.5 1,092,514 - -0.9 1,092,591 + -1.3 1,092,592 - -1.1 1,092,601 - -0.3 1,092,609 + +0.1 1,092,609 + -0.5 1,092,610 - +1.1 1,092,610 - +0.7 1,092,610 - -0.0 1,092,792 - -1.1 1,092,792 - -1.5 1,092,804 + +0.5 1,092,804 + -0.8 1,092,805 - -2.6 1,092,805 - +2.3 1,092,805 - -0.1 1,092,874 + Pf6N2E2_929 0.16 -1.4 1,092,874 + Pf6N2E2_929 0.16 +1.6 1,092,874 + +1.5 1,092,875 - Pf6N2E2_929 0.16 -2.9 1,092,880 + Pf6N2E2_929 0.17 +0.9 1,092,880 + Pf6N2E2_929 0.17 +0.4 1,092,880 + Pf6N2E2_929 0.17 +0.1 1,092,880 + Pf6N2E2_929 0.17 -1.5 1,092,880 + Pf6N2E2_929 0.17 -0.3 1,092,880 + Pf6N2E2_929 0.17 -2.3 1,092,881 - Pf6N2E2_929 0.17 +2.3 1,092,881 - Pf6N2E2_929 0.17 -1.1 1,092,881 - Pf6N2E2_929 0.17 -1.5 1,092,881 - Pf6N2E2_929 0.17 +0.1 1,092,881 - Pf6N2E2_929 0.17 +1.7 1,092,881 - Pf6N2E2_929 0.17 -0.1 1,092,881 - Pf6N2E2_929 0.17 +0.6 1,092,881 - Pf6N2E2_929 0.17 +0.8 1,092,881 - Pf6N2E2_929 0.17 -1.8 1,092,881 - Pf6N2E2_929 0.17 -0.6 1,092,881 - Pf6N2E2_929 0.17 -2.4 1,092,881 - Pf6N2E2_929 0.17 -0.7 1,092,881 - Pf6N2E2_929 0.17 +0.4 1,092,907 + Pf6N2E2_929 0.21 -0.2 1,092,907 + Pf6N2E2_929 0.21 +0.5 1,092,907 + Pf6N2E2_929 0.21 -0.4 1,092,908 - Pf6N2E2_929 0.21 -3.0 1,092,908 - Pf6N2E2_929 0.21 +0.1 1,092,908 - Pf6N2E2_929 0.21 +1.4 1,092,908 - Pf6N2E2_929 0.21 -0.4 1,092,935 - Pf6N2E2_929 0.26 -1.9 1,092,935 - Pf6N2E2_929 0.26 -0.8 1,092,986 - Pf6N2E2_929 0.34 +0.9 1,092,986 - +3.1 1,092,986 - Pf6N2E2_929 0.34 -1.3 1,093,021 + Pf6N2E2_929 0.40 -1.5 1,093,022 - Pf6N2E2_929 0.40 -0.3 1,093,022 - Pf6N2E2_929 0.40 +0.7 1,093,022 - Pf6N2E2_929 0.40 -1.1 1,093,022 - Pf6N2E2_929 0.40 -0.9
Or see this region's nucleotide sequence