Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4034 and Pf6N2E2_6130 are separated by 172 nucleotides Pf6N2E2_6130 and Pf6N2E2_6131 are separated by 103 nucleotides Pf6N2E2_6131 and Pf6N2E2_6132 are separated by 167 nucleotides
Pf6N2E2_4034 - NADH:ubiquinone oxidoreductase subunit 2 (chain N), at 4,708,736 to 4,709,374
_4034
Pf6N2E2_6130 - 5S RNA, at 4,709,547 to 4,709,666
_6130
Pf6N2E2_6131 - 5S RNA, at 4,709,770 to 4,709,889
_6131
Pf6N2E2_6132 - Large Subunit Ribosomal RNA; lsuRNA; LSU rRNA, at 4,710,057 to 4,712,948
_6132
Position (kb)
4709
4710 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4708.556 kb on + strand at 4708.556 kb on + strand at 4708.556 kb on + strand at 4708.557 kb on - strand at 4708.557 kb on - strand at 4708.557 kb on - strand at 4708.557 kb on - strand at 4708.570 kb on + strand at 4708.571 kb on - strand at 4708.571 kb on - strand at 4708.571 kb on - strand at 4708.571 kb on - strand at 4708.682 kb on + strand at 4708.703 kb on + strand at 4708.704 kb on - strand at 4708.712 kb on - strand at 4708.737 kb on + strand at 4708.737 kb on + strand at 4708.803 kb on + strand, within Pf6N2E2_4034 at 4708.803 kb on + strand, within Pf6N2E2_4034 at 4708.804 kb on - strand, within Pf6N2E2_4034 at 4709.074 kb on - strand, within Pf6N2E2_4034 at 4709.074 kb on - strand, within Pf6N2E2_4034 at 4709.155 kb on + strand, within Pf6N2E2_4034 at 4709.155 kb on + strand, within Pf6N2E2_4034 at 4709.155 kb on + strand, within Pf6N2E2_4034 at 4709.155 kb on + strand, within Pf6N2E2_4034 at 4709.155 kb on + strand, within Pf6N2E2_4034 at 4709.156 kb on - strand, within Pf6N2E2_4034 at 4709.156 kb on - strand, within Pf6N2E2_4034 at 4709.156 kb on - strand, within Pf6N2E2_4034 at 4709.301 kb on + strand, within Pf6N2E2_4034 at 4709.301 kb on + strand, within Pf6N2E2_4034 at 4709.301 kb on + strand, within Pf6N2E2_4034 at 4709.301 kb on + strand, within Pf6N2E2_4034 at 4709.302 kb on - strand, within Pf6N2E2_4034 at 4709.302 kb on - strand, within Pf6N2E2_4034 at 4709.307 kb on + strand, within Pf6N2E2_4034 at 4709.307 kb on + strand, within Pf6N2E2_4034 at 4709.307 kb on + strand, within Pf6N2E2_4034 at 4709.308 kb on - strand, within Pf6N2E2_4034 at 4709.308 kb on - strand, within Pf6N2E2_4034 at 4709.308 kb on - strand, within Pf6N2E2_4034 at 4709.430 kb on + strand at 4709.440 kb on + strand at 4709.440 kb on + strand at 4709.440 kb on + strand at 4709.440 kb on + strand at 4709.440 kb on + strand at 4709.440 kb on + strand at 4709.440 kb on + strand at 4709.440 kb on + strand at 4709.441 kb on - strand at 4709.441 kb on - strand at 4709.441 kb on - strand at 4709.441 kb on - strand at 4709.564 kb on - strand, within Pf6N2E2_6130 at 4709.564 kb on - strand, within Pf6N2E2_6130 at 4709.564 kb on - strand, within Pf6N2E2_6130 at 4709.564 kb on - strand, within Pf6N2E2_6130 at 4709.564 kb on - strand, within Pf6N2E2_6130 at 4709.590 kb on - strand, within Pf6N2E2_6130 at 4709.590 kb on - strand, within Pf6N2E2_6130 at 4709.590 kb on - strand, within Pf6N2E2_6130 at 4709.652 kb on + strand, within Pf6N2E2_6130 at 4709.719 kb on + strand at 4709.738 kb on - strand at 4709.738 kb on - strand at 4709.754 kb on - strand at 4709.754 kb on - strand at 4709.754 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 4,708,556 + -2.6 4,708,556 + -0.6 4,708,556 + +0.1 4,708,557 - -0.1 4,708,557 - +0.9 4,708,557 - +0.3 4,708,557 - -1.1 4,708,570 + -0.1 4,708,571 - -1.7 4,708,571 - -0.9 4,708,571 - +0.7 4,708,571 - +0.6 4,708,682 + +0.5 4,708,703 + +0.7 4,708,704 - -2.5 4,708,712 - +1.8 4,708,737 + +0.1 4,708,737 + +0.6 4,708,803 + Pf6N2E2_4034 0.10 -2.7 4,708,803 + Pf6N2E2_4034 0.10 +0.3 4,708,804 - Pf6N2E2_4034 0.11 -1.2 4,709,074 - Pf6N2E2_4034 0.53 +2.2 4,709,074 - Pf6N2E2_4034 0.53 +2.5 4,709,155 + Pf6N2E2_4034 0.66 +1.2 4,709,155 + Pf6N2E2_4034 0.66 +0.5 4,709,155 + Pf6N2E2_4034 0.66 -0.5 4,709,155 + Pf6N2E2_4034 0.66 +1.3 4,709,155 + Pf6N2E2_4034 0.66 -0.6 4,709,156 - Pf6N2E2_4034 0.66 -1.2 4,709,156 - Pf6N2E2_4034 0.66 -2.9 4,709,156 - Pf6N2E2_4034 0.66 -1.2 4,709,301 + Pf6N2E2_4034 0.88 +0.1 4,709,301 + Pf6N2E2_4034 0.88 +1.9 4,709,301 + Pf6N2E2_4034 0.88 -0.1 4,709,301 + Pf6N2E2_4034 0.88 +2.6 4,709,302 - Pf6N2E2_4034 0.89 -0.5 4,709,302 - Pf6N2E2_4034 0.89 -0.9 4,709,307 + Pf6N2E2_4034 0.89 -0.7 4,709,307 + Pf6N2E2_4034 0.89 -1.1 4,709,307 + Pf6N2E2_4034 0.89 +0.7 4,709,308 - Pf6N2E2_4034 0.90 +1.7 4,709,308 - Pf6N2E2_4034 0.90 -0.4 4,709,308 - Pf6N2E2_4034 0.90 -1.2 4,709,430 + -1.0 4,709,440 + +0.8 4,709,440 + -2.8 4,709,440 + +0.6 4,709,440 + +1.0 4,709,440 + +1.5 4,709,440 + -0.3 4,709,440 + +0.9 4,709,440 + -0.8 4,709,441 - +1.1 4,709,441 - -0.5 4,709,441 - -0.8 4,709,441 - -2.6 4,709,564 - Pf6N2E2_6130 0.14 -2.2 4,709,564 - Pf6N2E2_6130 0.14 -0.9 4,709,564 - Pf6N2E2_6130 0.14 -1.9 4,709,564 - Pf6N2E2_6130 0.14 +1.1 4,709,564 - Pf6N2E2_6130 0.14 -1.1 4,709,590 - Pf6N2E2_6130 0.36 +1.2 4,709,590 - Pf6N2E2_6130 0.36 -0.6 4,709,590 - Pf6N2E2_6130 0.36 -1.6 4,709,652 + Pf6N2E2_6130 0.88 -1.6 4,709,719 + -0.7 4,709,738 - -1.7 4,709,738 - +0.3 4,709,754 - -2.0 4,709,754 - -2.3 4,709,754 - -1.9
Or see this region's nucleotide sequence