Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5780 and Pf6N2E2_5781 are separated by 106 nucleotides Pf6N2E2_5781 and Pf6N2E2_5782 are separated by 255 nucleotides Pf6N2E2_5782 and Pf6N2E2_5783 are separated by 469 nucleotides
Pf6N2E2_5780 - Periplasmic protease, at 6,598,234 to 6,600,345
_5780
Pf6N2E2_5781 - Oxidoreductase, zinc-binding, at 6,600,452 to 6,601,414
_5781
Pf6N2E2_5782 - hypothetical protein, at 6,601,670 to 6,601,891
_5782
Pf6N2E2_5783 - hypothetical protein, at 6,602,361 to 6,603,002
_5783
Position (kb)
6600
6601
6602 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6599.624 kb on + strand, within Pf6N2E2_5780 at 6599.625 kb on - strand, within Pf6N2E2_5780 at 6599.642 kb on + strand, within Pf6N2E2_5780 at 6599.666 kb on + strand, within Pf6N2E2_5780 at 6599.666 kb on + strand, within Pf6N2E2_5780 at 6599.666 kb on + strand, within Pf6N2E2_5780 at 6599.666 kb on + strand, within Pf6N2E2_5780 at 6599.667 kb on - strand, within Pf6N2E2_5780 at 6599.883 kb on + strand, within Pf6N2E2_5780 at 6599.931 kb on - strand, within Pf6N2E2_5780 at 6599.969 kb on + strand, within Pf6N2E2_5780 at 6599.969 kb on + strand, within Pf6N2E2_5780 at 6599.969 kb on + strand, within Pf6N2E2_5780 at 6599.970 kb on - strand, within Pf6N2E2_5780 at 6599.970 kb on - strand, within Pf6N2E2_5780 at 6600.065 kb on + strand, within Pf6N2E2_5780 at 6600.095 kb on + strand, within Pf6N2E2_5780 at 6600.095 kb on + strand, within Pf6N2E2_5780 at 6600.096 kb on - strand, within Pf6N2E2_5780 at 6600.096 kb on - strand, within Pf6N2E2_5780 at 6600.104 kb on + strand, within Pf6N2E2_5780 at 6600.146 kb on + strand at 6600.146 kb on + strand at 6600.146 kb on + strand at 6600.146 kb on + strand at 6600.146 kb on + strand at 6600.147 kb on - strand at 6600.278 kb on - strand at 6600.345 kb on + strand at 6600.346 kb on - strand at 6600.346 kb on - strand at 6600.346 kb on - strand at 6600.346 kb on - strand at 6600.348 kb on + strand at 6600.348 kb on + strand at 6600.349 kb on - strand at 6600.349 kb on - strand at 6600.349 kb on - strand at 6600.392 kb on - strand at 6600.392 kb on - strand at 6600.440 kb on + strand at 6600.532 kb on + strand at 6600.532 kb on + strand at 6600.533 kb on - strand at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.750 kb on + strand, within Pf6N2E2_5781 at 6600.751 kb on - strand, within Pf6N2E2_5781 at 6600.751 kb on - strand, within Pf6N2E2_5781 at 6600.751 kb on - strand, within Pf6N2E2_5781 at 6600.751 kb on - strand, within Pf6N2E2_5781 at 6600.751 kb on - strand, within Pf6N2E2_5781 at 6600.806 kb on + strand, within Pf6N2E2_5781 at 6600.864 kb on + strand, within Pf6N2E2_5781 at 6600.971 kb on + strand, within Pf6N2E2_5781 at 6600.971 kb on + strand, within Pf6N2E2_5781 at 6601.005 kb on + strand, within Pf6N2E2_5781 at 6601.005 kb on + strand, within Pf6N2E2_5781 at 6601.080 kb on - strand, within Pf6N2E2_5781 at 6601.189 kb on + strand, within Pf6N2E2_5781 at 6601.427 kb on + strand at 6601.485 kb on + strand at 6601.485 kb on + strand at 6601.486 kb on - strand at 6601.486 kb on - strand at 6601.488 kb on + strand at 6601.488 kb on + strand at 6601.489 kb on - strand at 6601.528 kb on + strand at 6601.529 kb on - strand at 6601.533 kb on - strand at 6601.533 kb on - strand at 6601.538 kb on + strand at 6601.539 kb on - strand at 6601.560 kb on + strand at 6601.560 kb on + strand at 6601.560 kb on + strand at 6601.561 kb on - strand at 6601.561 kb on - strand at 6601.561 kb on - strand at 6601.561 kb on - strand at 6601.584 kb on + strand at 6601.584 kb on + strand at 6601.584 kb on + strand at 6601.585 kb on - strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.604 kb on + strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.605 kb on - strand at 6601.621 kb on - strand at 6601.654 kb on + strand at 6601.682 kb on + strand at 6601.682 kb on + strand at 6601.682 kb on + strand at 6601.682 kb on + strand at 6601.682 kb on + strand at 6601.682 kb on + strand at 6601.682 kb on + strand at 6601.682 kb on + strand at 6601.683 kb on - strand at 6601.683 kb on - strand at 6601.683 kb on - strand at 6601.683 kb on - strand at 6601.683 kb on - strand at 6601.683 kb on - strand at 6601.683 kb on - strand at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.724 kb on + strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.725 kb on - strand, within Pf6N2E2_5782 at 6601.726 kb on + strand, within Pf6N2E2_5782 at 6601.727 kb on - strand, within Pf6N2E2_5782 at 6601.784 kb on + strand, within Pf6N2E2_5782 at 6601.785 kb on - strand, within Pf6N2E2_5782 at 6601.889 kb on + strand at 6601.889 kb on + strand at 6601.890 kb on - strand at 6601.890 kb on - strand at 6601.890 kb on - strand at 6602.030 kb on + strand at 6602.030 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.048 kb on + strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.049 kb on - strand at 6602.126 kb on + strand at 6602.127 kb on - strand at 6602.127 kb on - strand at 6602.138 kb on + strand at 6602.305 kb on + strand at 6602.306 kb on - strand at 6602.310 kb on - strand at 6602.310 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 6,599,624 + Pf6N2E2_5780 0.66 +0.8 6,599,625 - Pf6N2E2_5780 0.66 +0.8 6,599,642 + Pf6N2E2_5780 0.67 +1.0 6,599,666 + Pf6N2E2_5780 0.68 +0.8 6,599,666 + Pf6N2E2_5780 0.68 +1.4 6,599,666 + Pf6N2E2_5780 0.68 +2.2 6,599,666 + Pf6N2E2_5780 0.68 +2.3 6,599,667 - Pf6N2E2_5780 0.68 -0.9 6,599,883 + Pf6N2E2_5780 0.78 +0.3 6,599,931 - Pf6N2E2_5780 0.80 -0.3 6,599,969 + Pf6N2E2_5780 0.82 -0.3 6,599,969 + Pf6N2E2_5780 0.82 +1.8 6,599,969 + Pf6N2E2_5780 0.82 +0.1 6,599,970 - Pf6N2E2_5780 0.82 -0.3 6,599,970 - Pf6N2E2_5780 0.82 +1.7 6,600,065 + Pf6N2E2_5780 0.87 -0.3 6,600,095 + Pf6N2E2_5780 0.88 +1.1 6,600,095 + Pf6N2E2_5780 0.88 +0.8 6,600,096 - Pf6N2E2_5780 0.88 +1.9 6,600,096 - Pf6N2E2_5780 0.88 -0.9 6,600,104 + Pf6N2E2_5780 0.89 +0.8 6,600,146 + -0.8 6,600,146 + -0.7 6,600,146 + +1.5 6,600,146 + -2.2 6,600,146 + +0.1 6,600,147 - -0.8 6,600,278 - -2.0 6,600,345 + +0.3 6,600,346 - +0.1 6,600,346 - +0.2 6,600,346 - +0.5 6,600,346 - +0.8 6,600,348 + -1.3 6,600,348 + -1.0 6,600,349 - +2.1 6,600,349 - +0.2 6,600,349 - +0.1 6,600,392 - +1.9 6,600,392 - +0.1 6,600,440 + +2.7 6,600,532 + -0.5 6,600,532 + -1.9 6,600,533 - -1.8 6,600,750 + Pf6N2E2_5781 0.31 -1.9 6,600,750 + Pf6N2E2_5781 0.31 -1.9 6,600,750 + Pf6N2E2_5781 0.31 -0.8 6,600,750 + Pf6N2E2_5781 0.31 -2.0 6,600,750 + Pf6N2E2_5781 0.31 -0.7 6,600,750 + Pf6N2E2_5781 0.31 -0.3 6,600,750 + Pf6N2E2_5781 0.31 -1.3 6,600,750 + Pf6N2E2_5781 0.31 -1.7 6,600,751 - Pf6N2E2_5781 0.31 -1.0 6,600,751 - Pf6N2E2_5781 0.31 -1.8 6,600,751 - Pf6N2E2_5781 0.31 +1.5 6,600,751 - Pf6N2E2_5781 0.31 -1.1 6,600,751 - Pf6N2E2_5781 0.31 -2.9 6,600,806 + Pf6N2E2_5781 0.37 -0.5 6,600,864 + Pf6N2E2_5781 0.43 -0.2 6,600,971 + Pf6N2E2_5781 0.54 -1.0 6,600,971 + Pf6N2E2_5781 0.54 -0.9 6,601,005 + Pf6N2E2_5781 0.57 -1.2 6,601,005 + Pf6N2E2_5781 0.57 -2.2 6,601,080 - Pf6N2E2_5781 0.65 -2.0 6,601,189 + Pf6N2E2_5781 0.77 -2.2 6,601,427 + -3.1 6,601,485 + -1.2 6,601,485 + +1.1 6,601,486 - +0.4 6,601,486 - +1.1 6,601,488 + -0.6 6,601,488 + -0.6 6,601,489 - +0.3 6,601,528 + +0.2 6,601,529 - +2.3 6,601,533 - -0.2 6,601,533 - +0.6 6,601,538 + +0.7 6,601,539 - -0.3 6,601,560 + +1.3 6,601,560 + -0.8 6,601,560 + -0.9 6,601,561 - +0.7 6,601,561 - +0.2 6,601,561 - +0.4 6,601,561 - -0.6 6,601,584 + -1.2 6,601,584 + +0.2 6,601,584 + -2.0 6,601,585 - -0.3 6,601,604 + +0.3 6,601,604 + -1.7 6,601,604 + -1.0 6,601,604 + +0.9 6,601,604 + -1.6 6,601,604 + -0.3 6,601,604 + +0.1 6,601,604 + +1.2 6,601,604 + -1.6 6,601,604 + +1.3 6,601,604 + +1.9 6,601,604 + -0.8 6,601,604 + +0.7 6,601,604 + -1.2 6,601,605 - -1.9 6,601,605 - -1.4 6,601,605 - -1.5 6,601,605 - -1.3 6,601,605 - -0.4 6,601,605 - +1.8 6,601,605 - -0.3 6,601,605 - +0.3 6,601,605 - -0.6 6,601,605 - -0.6 6,601,605 - -1.7 6,601,605 - +1.1 6,601,605 - +1.0 6,601,605 - -1.6 6,601,605 - +0.7 6,601,605 - +0.2 6,601,605 - -3.0 6,601,621 - +1.5 6,601,654 + +0.3 6,601,682 + +0.1 6,601,682 + +0.3 6,601,682 + +0.8 6,601,682 + -0.7 6,601,682 + -0.2 6,601,682 + -0.0 6,601,682 + -1.8 6,601,682 + +1.7 6,601,683 - -0.1 6,601,683 - -0.3 6,601,683 - -1.8 6,601,683 - -0.1 6,601,683 - -1.3 6,601,683 - -1.9 6,601,683 - -1.3 6,601,724 + Pf6N2E2_5782 0.24 -2.0 6,601,724 + Pf6N2E2_5782 0.24 -1.4 6,601,724 + Pf6N2E2_5782 0.24 +0.9 6,601,724 + Pf6N2E2_5782 0.24 +0.1 6,601,724 + Pf6N2E2_5782 0.24 -1.3 6,601,724 + Pf6N2E2_5782 0.24 -1.0 6,601,724 + Pf6N2E2_5782 0.24 +0.5 6,601,724 + Pf6N2E2_5782 0.24 +1.5 6,601,724 + Pf6N2E2_5782 0.24 +1.4 6,601,724 + Pf6N2E2_5782 0.24 +0.4 6,601,724 + Pf6N2E2_5782 0.24 -0.2 6,601,724 + Pf6N2E2_5782 0.24 +0.6 6,601,725 - Pf6N2E2_5782 0.25 -0.5 6,601,725 - Pf6N2E2_5782 0.25 -0.3 6,601,725 - Pf6N2E2_5782 0.25 +1.7 6,601,725 - Pf6N2E2_5782 0.25 +0.5 6,601,725 - Pf6N2E2_5782 0.25 +0.1 6,601,725 - Pf6N2E2_5782 0.25 -0.8 6,601,725 - Pf6N2E2_5782 0.25 +0.0 6,601,725 - Pf6N2E2_5782 0.25 +0.2 6,601,725 - Pf6N2E2_5782 0.25 -2.2 6,601,725 - Pf6N2E2_5782 0.25 +1.3 6,601,726 + Pf6N2E2_5782 0.25 +2.4 6,601,727 - Pf6N2E2_5782 0.26 -0.3 6,601,784 + Pf6N2E2_5782 0.51 +0.6 6,601,785 - Pf6N2E2_5782 0.52 +0.6 6,601,889 + +1.4 6,601,889 + +0.6 6,601,890 - -2.3 6,601,890 - +2.0 6,601,890 - -3.3 6,602,030 + -2.3 6,602,030 + -0.1 6,602,048 + -2.7 6,602,048 + +0.3 6,602,048 + -1.5 6,602,048 + -1.6 6,602,048 + +0.9 6,602,048 + -0.7 6,602,048 + +0.7 6,602,048 + +0.2 6,602,048 + -0.0 6,602,048 + +2.4 6,602,048 + -1.5 6,602,048 + +0.2 6,602,048 + +0.1 6,602,049 - -2.9 6,602,049 - -0.0 6,602,049 - +0.2 6,602,049 - -1.7 6,602,049 - +1.4 6,602,049 - -1.8 6,602,049 - +0.1 6,602,049 - -0.6 6,602,049 - -0.1 6,602,049 - +1.2 6,602,049 - +1.4 6,602,049 - -1.1 6,602,049 - +2.1 6,602,049 - +2.0 6,602,049 - +1.7 6,602,049 - +0.5 6,602,049 - -1.4 6,602,049 - -1.2 6,602,049 - +2.1 6,602,126 + -1.6 6,602,127 - +2.2 6,602,127 - -1.2 6,602,138 + +2.4 6,602,305 + +0.9 6,602,306 - -0.0 6,602,310 - +2.0 6,602,310 - -0.5
Or see this region's nucleotide sequence