Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5635 and Pf6N2E2_5636 are separated by 102 nucleotides Pf6N2E2_5636 and Pf6N2E2_5637 are separated by 37 nucleotides Pf6N2E2_5637 and Pf6N2E2_5638 are separated by 142 nucleotides
Pf6N2E2_5635 - Xanthine transporter,putative, at 6,450,089 to 6,451,288
_5635
Pf6N2E2_5636 - FIG00954951: hypothetical protein, at 6,451,391 to 6,451,621
_5636
Pf6N2E2_5637 - hypothetical protein, at 6,451,659 to 6,451,802
_5637
Pf6N2E2_5638 - Magnesium and cobalt transport protein CorA, at 6,451,945 to 6,452,967
_5638
Position (kb)
6451
6452 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6450.570 kb on + strand, within Pf6N2E2_5635 at 6450.570 kb on + strand, within Pf6N2E2_5635 at 6450.571 kb on - strand, within Pf6N2E2_5635 at 6450.571 kb on - strand, within Pf6N2E2_5635 at 6450.571 kb on - strand, within Pf6N2E2_5635 at 6450.573 kb on + strand, within Pf6N2E2_5635 at 6450.573 kb on + strand, within Pf6N2E2_5635 at 6450.573 kb on + strand, within Pf6N2E2_5635 at 6450.574 kb on - strand, within Pf6N2E2_5635 at 6450.574 kb on - strand, within Pf6N2E2_5635 at 6450.745 kb on + strand, within Pf6N2E2_5635 at 6450.745 kb on + strand, within Pf6N2E2_5635 at 6450.745 kb on + strand, within Pf6N2E2_5635 at 6450.745 kb on + strand, within Pf6N2E2_5635 at 6450.746 kb on - strand, within Pf6N2E2_5635 at 6450.746 kb on - strand, within Pf6N2E2_5635 at 6450.746 kb on - strand, within Pf6N2E2_5635 at 6450.746 kb on - strand, within Pf6N2E2_5635 at 6450.746 kb on - strand, within Pf6N2E2_5635 at 6450.825 kb on + strand, within Pf6N2E2_5635 at 6451.069 kb on + strand, within Pf6N2E2_5635 at 6451.117 kb on - strand, within Pf6N2E2_5635 at 6451.117 kb on - strand, within Pf6N2E2_5635 at 6451.316 kb on + strand at 6451.316 kb on + strand at 6451.317 kb on - strand at 6451.317 kb on - strand at 6451.320 kb on + strand at 6451.320 kb on + strand at 6451.329 kb on + strand at 6451.329 kb on + strand at 6451.367 kb on + strand at 6451.373 kb on + strand at 6451.373 kb on + strand at 6451.373 kb on + strand at 6451.373 kb on + strand at 6451.740 kb on + strand, within Pf6N2E2_5637 at 6451.740 kb on + strand, within Pf6N2E2_5637 at 6451.740 kb on + strand, within Pf6N2E2_5637 at 6451.741 kb on - strand, within Pf6N2E2_5637 at 6451.741 kb on - strand, within Pf6N2E2_5637 at 6451.741 kb on - strand, within Pf6N2E2_5637 at 6451.741 kb on - strand, within Pf6N2E2_5637 at 6451.741 kb on - strand, within Pf6N2E2_5637 at 6451.787 kb on + strand, within Pf6N2E2_5637 at 6451.829 kb on + strand at 6451.829 kb on + strand at 6451.830 kb on - strand at 6451.870 kb on + strand at 6451.871 kb on - strand at 6451.871 kb on - strand at 6451.871 kb on - strand at 6451.871 kb on - strand at 6451.871 kb on - strand at 6451.899 kb on + strand at 6451.900 kb on - strand at 6451.900 kb on - strand at 6451.931 kb on + strand at 6451.931 kb on + strand at 6451.932 kb on - strand at 6451.949 kb on + strand at 6452.305 kb on + strand, within Pf6N2E2_5638 at 6452.306 kb on - strand, within Pf6N2E2_5638 at 6452.498 kb on - strand, within Pf6N2E2_5638 at 6452.498 kb on - strand, within Pf6N2E2_5638
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 6,450,570 + Pf6N2E2_5635 0.40 -0.8 6,450,570 + Pf6N2E2_5635 0.40 -1.8 6,450,571 - Pf6N2E2_5635 0.40 -2.7 6,450,571 - Pf6N2E2_5635 0.40 -0.1 6,450,571 - Pf6N2E2_5635 0.40 -0.7 6,450,573 + Pf6N2E2_5635 0.40 +0.7 6,450,573 + Pf6N2E2_5635 0.40 +1.9 6,450,573 + Pf6N2E2_5635 0.40 -1.1 6,450,574 - Pf6N2E2_5635 0.40 -1.9 6,450,574 - Pf6N2E2_5635 0.40 +0.9 6,450,745 + Pf6N2E2_5635 0.55 -0.3 6,450,745 + Pf6N2E2_5635 0.55 -2.0 6,450,745 + Pf6N2E2_5635 0.55 -0.1 6,450,745 + Pf6N2E2_5635 0.55 -0.8 6,450,746 - Pf6N2E2_5635 0.55 +0.2 6,450,746 - Pf6N2E2_5635 0.55 -0.3 6,450,746 - Pf6N2E2_5635 0.55 -0.2 6,450,746 - Pf6N2E2_5635 0.55 -0.1 6,450,746 - Pf6N2E2_5635 0.55 +0.7 6,450,825 + Pf6N2E2_5635 0.61 +0.6 6,451,069 + Pf6N2E2_5635 0.82 -1.2 6,451,117 - Pf6N2E2_5635 0.86 -0.3 6,451,117 - Pf6N2E2_5635 0.86 -0.0 6,451,316 + -2.2 6,451,316 + +1.5 6,451,317 - +0.2 6,451,317 - +0.0 6,451,320 + -1.4 6,451,320 + +0.7 6,451,329 + -1.8 6,451,329 + +1.7 6,451,367 + -2.0 6,451,373 + -1.6 6,451,373 + -1.5 6,451,373 + -0.1 6,451,373 + +1.1 6,451,740 + Pf6N2E2_5637 0.56 -0.9 6,451,740 + Pf6N2E2_5637 0.56 +0.0 6,451,740 + Pf6N2E2_5637 0.56 +1.9 6,451,741 - Pf6N2E2_5637 0.57 +0.4 6,451,741 - Pf6N2E2_5637 0.57 +1.2 6,451,741 - Pf6N2E2_5637 0.57 +1.5 6,451,741 - Pf6N2E2_5637 0.57 -0.3 6,451,741 - Pf6N2E2_5637 0.57 +0.4 6,451,787 + Pf6N2E2_5637 0.89 +1.4 6,451,829 + +1.1 6,451,829 + -0.5 6,451,830 - -0.7 6,451,870 + -0.0 6,451,871 - -0.2 6,451,871 - +0.4 6,451,871 - -3.3 6,451,871 - -1.3 6,451,871 - -0.8 6,451,899 + +0.5 6,451,900 - -1.2 6,451,900 - +0.4 6,451,931 + +0.9 6,451,931 + -0.0 6,451,932 - -0.0 6,451,949 + +1.5 6,452,305 + Pf6N2E2_5638 0.35 -0.5 6,452,306 - Pf6N2E2_5638 0.35 -1.4 6,452,498 - Pf6N2E2_5638 0.54 +1.1 6,452,498 - Pf6N2E2_5638 0.54 +0.4
Or see this region's nucleotide sequence