Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5328 and Pf6N2E2_5329 are separated by 141 nucleotides Pf6N2E2_5329 and Pf6N2E2_5330 are separated by 24 nucleotides Pf6N2E2_5330 and Pf6N2E2_5331 are separated by 101 nucleotides
Pf6N2E2_5328 - FIG00958649: hypothetical protein, at 6,123,371 to 6,123,805
_5328
Pf6N2E2_5329 - Alpha/beta hydrolase, at 6,123,947 to 6,124,582
_5329
Pf6N2E2_5330 - Tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 6,124,607 to 6,125,962
_5330
Pf6N2E2_5331 - ATPase, AFG1 family, at 6,126,064 to 6,127,158
_5331
Position (kb)
6124
6125
6126 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 6123.654 kb on + strand, within Pf6N2E2_5328 at 6123.654 kb on + strand, within Pf6N2E2_5328 at 6123.654 kb on + strand, within Pf6N2E2_5328 at 6123.788 kb on + strand at 6123.788 kb on + strand at 6123.788 kb on + strand at 6123.789 kb on - strand at 6123.789 kb on - strand at 6123.818 kb on + strand at 6123.819 kb on - strand at 6123.820 kb on + strand at 6123.835 kb on + strand at 6123.835 kb on + strand at 6123.836 kb on - strand at 6123.836 kb on - strand at 6123.836 kb on - strand at 6123.861 kb on + strand at 6123.861 kb on + strand at 6123.861 kb on + strand at 6123.861 kb on + strand at 6123.861 kb on + strand at 6123.861 kb on + strand at 6123.861 kb on + strand at 6123.862 kb on - strand at 6123.862 kb on - strand at 6123.862 kb on - strand at 6123.862 kb on - strand at 6123.864 kb on - strand at 6123.902 kb on + strand at 6123.903 kb on - strand at 6123.903 kb on - strand at 6123.903 kb on - strand at 6123.906 kb on + strand at 6123.906 kb on + strand at 6123.907 kb on - strand at 6123.907 kb on - strand at 6123.922 kb on - strand at 6123.922 kb on - strand at 6123.922 kb on - strand at 6123.952 kb on + strand at 6123.952 kb on + strand at 6123.953 kb on - strand at 6123.953 kb on - strand at 6123.953 kb on - strand at 6123.953 kb on - strand at 6123.953 kb on - strand at 6123.969 kb on + strand at 6123.970 kb on - strand at 6123.970 kb on - strand at 6124.007 kb on + strand at 6124.007 kb on + strand at 6124.007 kb on + strand at 6124.008 kb on - strand at 6124.008 kb on - strand at 6124.133 kb on - strand, within Pf6N2E2_5329 at 6124.148 kb on + strand, within Pf6N2E2_5329 at 6124.149 kb on - strand, within Pf6N2E2_5329 at 6124.149 kb on - strand, within Pf6N2E2_5329 at 6124.158 kb on + strand, within Pf6N2E2_5329 at 6124.158 kb on + strand, within Pf6N2E2_5329 at 6124.159 kb on - strand, within Pf6N2E2_5329 at 6124.460 kb on + strand, within Pf6N2E2_5329 at 6124.461 kb on - strand, within Pf6N2E2_5329 at 6124.461 kb on - strand, within Pf6N2E2_5329 at 6126.027 kb on - strand at 6126.063 kb on + strand at 6126.063 kb on + strand at 6126.074 kb on + strand at 6126.075 kb on - strand at 6126.075 kb on - strand at 6126.161 kb on - strand at 6126.161 kb on - strand at 6126.251 kb on - strand, within Pf6N2E2_5331 at 6126.283 kb on + strand, within Pf6N2E2_5331 at 6126.284 kb on - strand, within Pf6N2E2_5331 at 6126.284 kb on - strand, within Pf6N2E2_5331 at 6126.284 kb on - strand, within Pf6N2E2_5331 at 6126.571 kb on + strand, within Pf6N2E2_5331 at 6126.572 kb on - strand, within Pf6N2E2_5331 at 6126.572 kb on - strand, within Pf6N2E2_5331 at 6126.572 kb on - strand, within Pf6N2E2_5331 at 6126.791 kb on + strand, within Pf6N2E2_5331 at 6126.791 kb on + strand, within Pf6N2E2_5331 at 6126.791 kb on + strand, within Pf6N2E2_5331 at 6126.791 kb on + strand, within Pf6N2E2_5331 at 6126.791 kb on + strand, within Pf6N2E2_5331 at 6126.791 kb on + strand, within Pf6N2E2_5331 at 6126.791 kb on + strand, within Pf6N2E2_5331 at 6126.792 kb on - strand, within Pf6N2E2_5331 at 6126.792 kb on - strand, within Pf6N2E2_5331 at 6126.792 kb on - strand, within Pf6N2E2_5331 at 6126.792 kb on - strand, within Pf6N2E2_5331 at 6126.828 kb on + strand, within Pf6N2E2_5331 at 6126.828 kb on + strand, within Pf6N2E2_5331
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 6,123,654 + Pf6N2E2_5328 0.65 -1.6 6,123,654 + Pf6N2E2_5328 0.65 -3.1 6,123,654 + Pf6N2E2_5328 0.65 -2.2 6,123,788 + -2.7 6,123,788 + -2.3 6,123,788 + -0.9 6,123,789 - -2.3 6,123,789 - -3.5 6,123,818 + -1.9 6,123,819 - -2.3 6,123,820 + -2.8 6,123,835 + -1.1 6,123,835 + -2.5 6,123,836 - -0.9 6,123,836 - +0.6 6,123,836 - -1.7 6,123,861 + -1.8 6,123,861 + -2.5 6,123,861 + -2.9 6,123,861 + -1.3 6,123,861 + -2.2 6,123,861 + -2.6 6,123,861 + +1.3 6,123,862 - -0.6 6,123,862 - -3.0 6,123,862 - +0.6 6,123,862 - -0.9 6,123,864 - -2.1 6,123,902 + -2.0 6,123,903 - -1.4 6,123,903 - -1.1 6,123,903 - -0.4 6,123,906 + -1.2 6,123,906 + -2.5 6,123,907 - -0.2 6,123,907 - -1.1 6,123,922 - +0.7 6,123,922 - +1.3 6,123,922 - -0.9 6,123,952 + -3.1 6,123,952 + -1.5 6,123,953 - -1.7 6,123,953 - +0.6 6,123,953 - -0.5 6,123,953 - +1.7 6,123,953 - -3.1 6,123,969 + -1.8 6,123,970 - +0.7 6,123,970 - +1.1 6,124,007 + -3.2 6,124,007 + -2.3 6,124,007 + -1.5 6,124,008 - -1.1 6,124,008 - +2.0 6,124,133 - Pf6N2E2_5329 0.29 -0.4 6,124,148 + Pf6N2E2_5329 0.32 +0.3 6,124,149 - Pf6N2E2_5329 0.32 -2.6 6,124,149 - Pf6N2E2_5329 0.32 +2.2 6,124,158 + Pf6N2E2_5329 0.33 -1.6 6,124,158 + Pf6N2E2_5329 0.33 +0.9 6,124,159 - Pf6N2E2_5329 0.33 +2.5 6,124,460 + Pf6N2E2_5329 0.81 -1.3 6,124,461 - Pf6N2E2_5329 0.81 +1.4 6,124,461 - Pf6N2E2_5329 0.81 -0.7 6,126,027 - -1.9 6,126,063 + -2.2 6,126,063 + -2.6 6,126,074 + -1.3 6,126,075 - -0.5 6,126,075 - +0.7 6,126,161 - +0.2 6,126,161 - -0.8 6,126,251 - Pf6N2E2_5331 0.17 +0.6 6,126,283 + Pf6N2E2_5331 0.20 +1.0 6,126,284 - Pf6N2E2_5331 0.20 +0.6 6,126,284 - Pf6N2E2_5331 0.20 -1.0 6,126,284 - Pf6N2E2_5331 0.20 -0.4 6,126,571 + Pf6N2E2_5331 0.46 -1.4 6,126,572 - Pf6N2E2_5331 0.46 -0.6 6,126,572 - Pf6N2E2_5331 0.46 -0.4 6,126,572 - Pf6N2E2_5331 0.46 +2.9 6,126,791 + Pf6N2E2_5331 0.66 +0.0 6,126,791 + Pf6N2E2_5331 0.66 +1.9 6,126,791 + Pf6N2E2_5331 0.66 +0.8 6,126,791 + Pf6N2E2_5331 0.66 -1.9 6,126,791 + Pf6N2E2_5331 0.66 +3.6 6,126,791 + Pf6N2E2_5331 0.66 -0.6 6,126,791 + Pf6N2E2_5331 0.66 +0.5 6,126,792 - Pf6N2E2_5331 0.66 -1.6 6,126,792 - Pf6N2E2_5331 0.66 -0.3 6,126,792 - Pf6N2E2_5331 0.66 +0.4 6,126,792 - Pf6N2E2_5331 0.66 +0.8 6,126,828 + Pf6N2E2_5331 0.70 +0.1 6,126,828 + Pf6N2E2_5331 0.70 +1.3
Or see this region's nucleotide sequence