Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4555 and Pf6N2E2_4556 are separated by 96 nucleotides Pf6N2E2_4556 and Pf6N2E2_4557 are separated by 141 nucleotides Pf6N2E2_4557 and Pf6N2E2_4558 are separated by 2 nucleotides Pf6N2E2_4558 and Pf6N2E2_4559 are separated by 171 nucleotides
Pf6N2E2_4555 - Lysophospholipase (EC 3.1.1.5), at 5,284,358 to 5,285,305
_4555
Pf6N2E2_4556 - FIG00953078: hypothetical protein, at 5,285,402 to 5,286,145
_4556
Pf6N2E2_4557 - oxidoreductase, 2OG-Fe(II) oxygenase family, at 5,286,287 to 5,286,919
_4557
Pf6N2E2_4558 - Purine nucleoside phosphorylase (EC 2.4.2.1), at 5,286,922 to 5,287,413
_4558
Pf6N2E2_4559 - probable integral membrane protein NMA1898, at 5,287,585 to 5,288,946
_4559
Position (kb)
5286
5287 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5285.313 kb on - strand at 5285.313 kb on - strand at 5285.347 kb on - strand at 5285.347 kb on - strand at 5285.403 kb on + strand at 5285.404 kb on - strand at 5285.463 kb on + strand at 5285.466 kb on + strand at 5285.466 kb on + strand at 5285.467 kb on - strand at 5285.467 kb on - strand at 5285.467 kb on - strand at 5285.467 kb on - strand at 5285.541 kb on + strand, within Pf6N2E2_4556 at 5285.541 kb on + strand, within Pf6N2E2_4556 at 5285.541 kb on + strand, within Pf6N2E2_4556 at 5285.542 kb on - strand, within Pf6N2E2_4556 at 5285.542 kb on - strand, within Pf6N2E2_4556 at 5285.542 kb on - strand, within Pf6N2E2_4556 at 5286.004 kb on - strand, within Pf6N2E2_4556 at 5286.072 kb on + strand at 5286.072 kb on + strand at 5286.072 kb on + strand at 5286.072 kb on + strand at 5286.073 kb on - strand at 5286.073 kb on - strand at 5286.073 kb on - strand at 5286.073 kb on - strand at 5286.084 kb on + strand at 5286.085 kb on - strand at 5286.085 kb on - strand at 5286.085 kb on - strand at 5286.085 kb on - strand at 5286.085 kb on - strand at 5286.170 kb on - strand at 5286.170 kb on - strand at 5286.170 kb on - strand at 5286.207 kb on - strand at 5286.228 kb on + strand at 5286.229 kb on - strand at 5286.229 kb on - strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.283 kb on + strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.284 kb on - strand at 5286.286 kb on + strand at 5286.287 kb on - strand at 5286.287 kb on - strand at 5286.287 kb on - strand at 5286.287 kb on - strand at 5286.287 kb on - strand at 5286.303 kb on + strand at 5286.303 kb on + strand at 5286.304 kb on - strand at 5286.304 kb on - strand at 5286.304 kb on - strand at 5286.304 kb on - strand at 5286.304 kb on - strand at 5286.304 kb on - strand at 5286.327 kb on + strand at 5286.328 kb on - strand at 5286.328 kb on - strand at 5286.332 kb on - strand at 5286.551 kb on + strand, within Pf6N2E2_4557 at 5286.551 kb on + strand, within Pf6N2E2_4557 at 5286.552 kb on - strand, within Pf6N2E2_4557 at 5286.552 kb on - strand, within Pf6N2E2_4557 at 5286.552 kb on - strand, within Pf6N2E2_4557 at 5286.657 kb on - strand, within Pf6N2E2_4557 at 5286.657 kb on - strand, within Pf6N2E2_4557 at 5286.716 kb on + strand, within Pf6N2E2_4557 at 5286.716 kb on + strand, within Pf6N2E2_4557 at 5286.717 kb on - strand, within Pf6N2E2_4557 at 5286.717 kb on - strand, within Pf6N2E2_4557 at 5286.717 kb on - strand, within Pf6N2E2_4557 at 5286.717 kb on - strand, within Pf6N2E2_4557 at 5286.717 kb on - strand, within Pf6N2E2_4557 at 5286.764 kb on + strand, within Pf6N2E2_4557 at 5286.764 kb on + strand, within Pf6N2E2_4557 at 5286.764 kb on + strand, within Pf6N2E2_4557 at 5286.764 kb on + strand, within Pf6N2E2_4557 at 5286.765 kb on - strand, within Pf6N2E2_4557 at 5286.765 kb on - strand, within Pf6N2E2_4557 at 5286.765 kb on - strand, within Pf6N2E2_4557 at 5287.273 kb on + strand, within Pf6N2E2_4558 at 5287.273 kb on + strand, within Pf6N2E2_4558 at 5287.273 kb on + strand, within Pf6N2E2_4558 at 5287.273 kb on + strand, within Pf6N2E2_4558 at 5287.273 kb on + strand, within Pf6N2E2_4558 at 5287.274 kb on - strand, within Pf6N2E2_4558 at 5287.274 kb on - strand, within Pf6N2E2_4558 at 5287.274 kb on - strand, within Pf6N2E2_4558 at 5287.468 kb on - strand at 5287.887 kb on - strand, within Pf6N2E2_4559 at 5287.887 kb on - strand, within Pf6N2E2_4559 at 5287.887 kb on - strand, within Pf6N2E2_4559 at 5287.887 kb on - strand, within Pf6N2E2_4559
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 5,285,313 - +0.1 5,285,313 - -0.9 5,285,347 - -1.7 5,285,347 - +1.1 5,285,403 + -1.7 5,285,404 - -2.1 5,285,463 + -0.5 5,285,466 + +0.4 5,285,466 + +0.7 5,285,467 - +0.4 5,285,467 - -2.4 5,285,467 - +1.0 5,285,467 - -1.2 5,285,541 + Pf6N2E2_4556 0.19 -1.7 5,285,541 + Pf6N2E2_4556 0.19 +0.2 5,285,541 + Pf6N2E2_4556 0.19 -0.0 5,285,542 - Pf6N2E2_4556 0.19 -1.7 5,285,542 - Pf6N2E2_4556 0.19 +1.4 5,285,542 - Pf6N2E2_4556 0.19 -2.1 5,286,004 - Pf6N2E2_4556 0.81 +0.7 5,286,072 + +0.5 5,286,072 + -2.0 5,286,072 + -0.6 5,286,072 + -0.1 5,286,073 - +0.5 5,286,073 - +2.7 5,286,073 - +1.9 5,286,073 - +0.7 5,286,084 + +1.3 5,286,085 - -1.1 5,286,085 - -0.9 5,286,085 - +0.1 5,286,085 - -1.7 5,286,085 - -1.1 5,286,170 - +0.0 5,286,170 - -1.9 5,286,170 - -0.6 5,286,207 - +1.9 5,286,228 + +3.0 5,286,229 - +0.8 5,286,229 - -2.5 5,286,283 + -0.0 5,286,283 + +0.2 5,286,283 + -1.5 5,286,283 + +1.9 5,286,283 + +1.2 5,286,283 + -1.5 5,286,283 + +0.5 5,286,283 + -1.8 5,286,283 + -0.5 5,286,284 - -1.5 5,286,284 - +0.3 5,286,284 - +1.3 5,286,284 - -0.8 5,286,284 - +0.4 5,286,284 - +0.7 5,286,284 - +0.0 5,286,284 - -0.9 5,286,284 - -0.6 5,286,284 - +0.3 5,286,286 + +1.5 5,286,287 - +0.4 5,286,287 - -0.4 5,286,287 - +0.6 5,286,287 - -0.1 5,286,287 - +0.1 5,286,303 + -1.4 5,286,303 + -0.9 5,286,304 - +0.8 5,286,304 - +0.8 5,286,304 - +0.7 5,286,304 - +0.2 5,286,304 - +2.0 5,286,304 - +0.2 5,286,327 + -2.5 5,286,328 - +0.3 5,286,328 - -0.4 5,286,332 - +0.3 5,286,551 + Pf6N2E2_4557 0.42 +1.6 5,286,551 + Pf6N2E2_4557 0.42 +2.0 5,286,552 - Pf6N2E2_4557 0.42 -1.7 5,286,552 - Pf6N2E2_4557 0.42 -2.8 5,286,552 - Pf6N2E2_4557 0.42 -1.0 5,286,657 - Pf6N2E2_4557 0.58 -1.2 5,286,657 - Pf6N2E2_4557 0.58 +1.6 5,286,716 + Pf6N2E2_4557 0.68 +0.4 5,286,716 + Pf6N2E2_4557 0.68 -1.1 5,286,717 - Pf6N2E2_4557 0.68 -1.3 5,286,717 - Pf6N2E2_4557 0.68 -1.5 5,286,717 - Pf6N2E2_4557 0.68 -1.2 5,286,717 - Pf6N2E2_4557 0.68 -0.5 5,286,717 - Pf6N2E2_4557 0.68 -0.6 5,286,764 + Pf6N2E2_4557 0.75 -2.0 5,286,764 + Pf6N2E2_4557 0.75 +0.6 5,286,764 + Pf6N2E2_4557 0.75 +0.6 5,286,764 + Pf6N2E2_4557 0.75 -2.1 5,286,765 - Pf6N2E2_4557 0.76 -1.2 5,286,765 - Pf6N2E2_4557 0.76 -0.7 5,286,765 - Pf6N2E2_4557 0.76 -1.3 5,287,273 + Pf6N2E2_4558 0.71 -1.0 5,287,273 + Pf6N2E2_4558 0.71 +0.5 5,287,273 + Pf6N2E2_4558 0.71 -0.1 5,287,273 + Pf6N2E2_4558 0.71 -0.2 5,287,273 + Pf6N2E2_4558 0.71 -0.9 5,287,274 - Pf6N2E2_4558 0.72 +2.1 5,287,274 - Pf6N2E2_4558 0.72 -2.0 5,287,274 - Pf6N2E2_4558 0.72 -1.2 5,287,468 - +0.8 5,287,887 - Pf6N2E2_4559 0.22 -3.4 5,287,887 - Pf6N2E2_4559 0.22 +1.1 5,287,887 - Pf6N2E2_4559 0.22 -0.0 5,287,887 - Pf6N2E2_4559 0.22 +1.7
Or see this region's nucleotide sequence