Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4015 and Pf6N2E2_4016 are separated by 812 nucleotides Pf6N2E2_4016 and Pf6N2E2_4017 are separated by 376 nucleotides Pf6N2E2_4017 and Pf6N2E2_4018 overlap by 4 nucleotides
Pf6N2E2_4015 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13), at 4,688,295 to 4,689,302
_4015
Pf6N2E2_4016 - hypothetical protein, at 4,690,115 to 4,690,387
_4016
Pf6N2E2_4017 - hypothetical protein, at 4,690,764 to 4,691,381
_4017
Pf6N2E2_4018 - RNA polymerase sigma-E factor, at 4,691,378 to 4,691,950
_4018
Position (kb)
4690
4691 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4689.275 kb on + strand at 4689.275 kb on + strand at 4689.320 kb on + strand at 4689.321 kb on - strand at 4689.321 kb on - strand at 4689.339 kb on - strand at 4689.339 kb on - strand at 4689.386 kb on + strand at 4689.386 kb on + strand at 4689.386 kb on + strand at 4689.386 kb on + strand at 4689.386 kb on + strand at 4689.386 kb on + strand at 4689.387 kb on - strand at 4689.387 kb on - strand at 4689.387 kb on - strand at 4689.387 kb on - strand at 4689.388 kb on + strand at 4689.388 kb on + strand at 4689.388 kb on + strand at 4689.389 kb on - strand at 4689.389 kb on - strand at 4689.389 kb on - strand at 4689.389 kb on - strand at 4689.453 kb on + strand at 4689.453 kb on + strand at 4689.454 kb on - strand at 4689.454 kb on - strand at 4689.454 kb on - strand at 4689.454 kb on - strand at 4689.605 kb on + strand at 4689.606 kb on - strand at 4689.622 kb on + strand at 4689.669 kb on + strand at 4689.670 kb on - strand at 4689.670 kb on - strand at 4689.732 kb on - strand at 4689.927 kb on + strand at 4689.927 kb on + strand at 4689.927 kb on + strand at 4689.927 kb on + strand at 4689.928 kb on - strand at 4689.928 kb on - strand at 4689.928 kb on - strand at 4689.932 kb on + strand at 4689.932 kb on + strand at 4689.932 kb on + strand at 4689.933 kb on - strand at 4689.933 kb on - strand at 4689.933 kb on - strand at 4689.933 kb on - strand at 4689.933 kb on - strand at 4689.933 kb on - strand at 4689.951 kb on + strand at 4689.951 kb on + strand at 4689.951 kb on + strand at 4689.951 kb on + strand at 4689.952 kb on - strand at 4689.952 kb on - strand at 4689.966 kb on + strand at 4689.967 kb on - strand at 4689.986 kb on + strand at 4689.986 kb on + strand at 4689.987 kb on - strand at 4689.987 kb on - strand at 4689.987 kb on - strand at 4689.992 kb on + strand at 4690.003 kb on + strand at 4690.103 kb on + strand at 4690.104 kb on - strand at 4690.106 kb on + strand at 4690.106 kb on + strand at 4690.106 kb on + strand at 4690.107 kb on - strand at 4690.107 kb on - strand at 4690.107 kb on - strand at 4690.110 kb on + strand at 4690.110 kb on + strand at 4690.110 kb on + strand at 4690.110 kb on + strand at 4690.110 kb on + strand at 4690.110 kb on + strand at 4690.111 kb on - strand at 4690.111 kb on - strand at 4690.111 kb on - strand at 4690.116 kb on + strand at 4690.117 kb on - strand at 4690.141 kb on + strand at 4690.141 kb on + strand at 4690.141 kb on + strand at 4690.142 kb on - strand at 4690.142 kb on - strand at 4690.148 kb on + strand, within Pf6N2E2_4016 at 4690.148 kb on + strand, within Pf6N2E2_4016 at 4690.149 kb on - strand, within Pf6N2E2_4016 at 4690.149 kb on - strand, within Pf6N2E2_4016 at 4690.179 kb on - strand, within Pf6N2E2_4016 at 4690.179 kb on - strand, within Pf6N2E2_4016 at 4690.188 kb on + strand, within Pf6N2E2_4016 at 4690.201 kb on + strand, within Pf6N2E2_4016 at 4690.201 kb on + strand, within Pf6N2E2_4016 at 4690.209 kb on + strand, within Pf6N2E2_4016 at 4690.209 kb on + strand, within Pf6N2E2_4016 at 4690.337 kb on + strand, within Pf6N2E2_4016 at 4690.338 kb on - strand, within Pf6N2E2_4016 at 4690.338 kb on - strand, within Pf6N2E2_4016 at 4690.377 kb on + strand at 4690.377 kb on + strand at 4690.377 kb on + strand at 4690.377 kb on + strand at 4690.377 kb on + strand at 4690.377 kb on + strand at 4690.377 kb on + strand at 4690.377 kb on + strand at 4690.378 kb on - strand at 4690.378 kb on - strand at 4690.378 kb on - strand at 4690.378 kb on - strand at 4690.378 kb on - strand at 4690.378 kb on - strand at 4690.378 kb on - strand at 4690.378 kb on - strand at 4690.392 kb on + strand at 4690.393 kb on - strand at 4690.393 kb on - strand at 4690.423 kb on + strand at 4690.423 kb on + strand at 4690.424 kb on - strand at 4690.474 kb on + strand at 4690.474 kb on + strand at 4690.474 kb on - strand at 4690.475 kb on - strand at 4690.475 kb on - strand at 4690.475 kb on - strand at 4690.475 kb on - strand at 4690.475 kb on - strand at 4690.475 kb on - strand at 4690.475 kb on - strand at 4690.475 kb on - strand at 4690.508 kb on + strand at 4690.508 kb on + strand at 4690.508 kb on + strand at 4690.509 kb on - strand at 4690.509 kb on - strand at 4690.509 kb on - strand at 4690.509 kb on - strand at 4690.510 kb on + strand at 4690.510 kb on + strand at 4690.510 kb on + strand at 4690.510 kb on + strand at 4690.510 kb on + strand at 4690.511 kb on - strand at 4690.511 kb on - strand at 4690.511 kb on - strand at 4690.517 kb on + strand at 4690.535 kb on + strand at 4690.581 kb on + strand at 4690.581 kb on + strand at 4690.581 kb on + strand at 4690.581 kb on + strand at 4690.582 kb on - strand at 4690.614 kb on + strand at 4690.614 kb on + strand at 4690.614 kb on + strand at 4690.614 kb on + strand at 4690.614 kb on + strand at 4690.615 kb on - strand at 4690.615 kb on - strand at 4690.615 kb on - strand at 4690.615 kb on - strand at 4690.706 kb on + strand at 4690.706 kb on + strand at 4690.707 kb on - strand at 4690.707 kb on - strand at 4690.707 kb on - strand at 4690.707 kb on - strand at 4690.707 kb on - strand at 4690.740 kb on + strand at 4690.766 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 4,689,275 + +0.9 4,689,275 + -1.2 4,689,320 + +0.8 4,689,321 - +0.4 4,689,321 - -2.0 4,689,339 - -0.2 4,689,339 - +0.5 4,689,386 + -1.1 4,689,386 + +2.0 4,689,386 + -1.6 4,689,386 + -1.7 4,689,386 + -0.4 4,689,386 + -1.6 4,689,387 - -0.0 4,689,387 - +0.4 4,689,387 - +0.6 4,689,387 - +0.9 4,689,388 + -0.9 4,689,388 + -0.2 4,689,388 + -0.5 4,689,389 - -0.7 4,689,389 - +1.5 4,689,389 - +0.6 4,689,389 - -1.6 4,689,453 + -1.4 4,689,453 + -1.4 4,689,454 - -0.4 4,689,454 - +3.0 4,689,454 - -0.5 4,689,454 - +0.3 4,689,605 + +0.2 4,689,606 - +0.5 4,689,622 + -0.6 4,689,669 + -0.5 4,689,670 - +1.6 4,689,670 - +1.1 4,689,732 - -0.6 4,689,927 + -1.5 4,689,927 + -0.8 4,689,927 + -2.0 4,689,927 + +0.3 4,689,928 - +1.7 4,689,928 - +1.3 4,689,928 - +1.2 4,689,932 + -0.3 4,689,932 + -1.0 4,689,932 + -0.4 4,689,933 - +0.7 4,689,933 - -0.3 4,689,933 - +1.0 4,689,933 - -2.9 4,689,933 - -2.4 4,689,933 - +0.5 4,689,951 + +0.1 4,689,951 + -1.0 4,689,951 + -0.1 4,689,951 + -1.7 4,689,952 - -0.1 4,689,952 - -1.5 4,689,966 + +0.1 4,689,967 - +0.6 4,689,986 + -1.5 4,689,986 + +1.3 4,689,987 - -0.2 4,689,987 - -0.8 4,689,987 - -0.4 4,689,992 + -2.3 4,690,003 + +1.8 4,690,103 + +0.3 4,690,104 - -1.5 4,690,106 + +1.0 4,690,106 + -0.5 4,690,106 + -2.6 4,690,107 - +0.7 4,690,107 - -0.1 4,690,107 - -2.1 4,690,110 + -1.8 4,690,110 + -1.5 4,690,110 + +1.5 4,690,110 + -1.7 4,690,110 + -1.4 4,690,110 + -0.1 4,690,111 - -0.6 4,690,111 - +1.3 4,690,111 - +0.5 4,690,116 + -0.3 4,690,117 - +0.5 4,690,141 + -2.8 4,690,141 + +2.3 4,690,141 + +0.6 4,690,142 - -0.4 4,690,142 - +0.8 4,690,148 + Pf6N2E2_4016 0.12 +2.5 4,690,148 + Pf6N2E2_4016 0.12 -1.7 4,690,149 - Pf6N2E2_4016 0.12 -2.0 4,690,149 - Pf6N2E2_4016 0.12 +1.5 4,690,179 - Pf6N2E2_4016 0.23 -1.2 4,690,179 - Pf6N2E2_4016 0.23 -0.2 4,690,188 + Pf6N2E2_4016 0.27 -1.0 4,690,201 + Pf6N2E2_4016 0.32 -2.3 4,690,201 + Pf6N2E2_4016 0.32 +1.3 4,690,209 + Pf6N2E2_4016 0.34 -0.2 4,690,209 + Pf6N2E2_4016 0.34 +2.0 4,690,337 + Pf6N2E2_4016 0.81 +1.1 4,690,338 - Pf6N2E2_4016 0.82 +1.2 4,690,338 - Pf6N2E2_4016 0.82 +1.1 4,690,377 + -2.4 4,690,377 + -0.1 4,690,377 + +1.0 4,690,377 + -0.1 4,690,377 + -0.1 4,690,377 + +0.0 4,690,377 + -1.2 4,690,377 + -0.2 4,690,378 - -0.1 4,690,378 - +1.0 4,690,378 - +0.4 4,690,378 - -2.0 4,690,378 - -0.6 4,690,378 - -0.2 4,690,378 - +0.8 4,690,378 - -0.6 4,690,392 + -2.2 4,690,393 - +0.2 4,690,393 - +2.3 4,690,423 + +1.2 4,690,423 + -0.5 4,690,424 - +1.6 4,690,474 + +1.8 4,690,474 + -1.8 4,690,474 - -1.1 4,690,475 - -0.8 4,690,475 - +0.6 4,690,475 - -0.2 4,690,475 - -0.6 4,690,475 - +0.6 4,690,475 - -1.2 4,690,475 - +0.4 4,690,475 - +0.9 4,690,508 + +0.6 4,690,508 + +0.7 4,690,508 + -0.0 4,690,509 - +0.5 4,690,509 - -0.1 4,690,509 - +1.0 4,690,509 - +1.3 4,690,510 + +0.4 4,690,510 + +0.1 4,690,510 + +3.0 4,690,510 + +0.5 4,690,510 + +1.3 4,690,511 - +2.7 4,690,511 - -1.3 4,690,511 - -0.0 4,690,517 + +0.9 4,690,535 + -1.8 4,690,581 + -2.6 4,690,581 + +2.4 4,690,581 + +0.7 4,690,581 + +0.4 4,690,582 - +1.6 4,690,614 + -2.2 4,690,614 + +1.1 4,690,614 + +0.5 4,690,614 + +0.4 4,690,614 + -0.4 4,690,615 - -0.7 4,690,615 - -2.1 4,690,615 - +2.4 4,690,615 - -1.4 4,690,706 + -2.5 4,690,706 + -1.6 4,690,707 - -0.5 4,690,707 - -0.1 4,690,707 - +1.4 4,690,707 - +0.2 4,690,707 - -2.0 4,690,740 + -0.3 4,690,766 - -0.4
Or see this region's nucleotide sequence