Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3946 and Pf6N2E2_3947 are separated by 115 nucleotides Pf6N2E2_3947 and Pf6N2E2_3948 are separated by 86 nucleotides Pf6N2E2_3948 and Pf6N2E2_3949 are separated by 204 nucleotides
Pf6N2E2_3946 - Thymidylate synthase (EC 2.1.1.45), at 4,583,596 to 4,584,567
_3946
Pf6N2E2_3947 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 4,584,683 to 4,585,129
_3947
Pf6N2E2_3948 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 4,585,216 to 4,587,435
_3948
Pf6N2E2_3949 - RND efflux transporter, at 4,587,640 to 4,590,687
_3949
Position (kb)
4585
4586
4587
4588 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4585.024 kb on - strand, within Pf6N2E2_3947 at 4585.071 kb on + strand, within Pf6N2E2_3947 at 4585.074 kb on + strand, within Pf6N2E2_3947 at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.146 kb on + strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.147 kb on - strand at 4585.180 kb on + strand at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.717 kb on + strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.718 kb on - strand, within Pf6N2E2_3948 at 4585.970 kb on + strand, within Pf6N2E2_3948 at 4585.970 kb on + strand, within Pf6N2E2_3948 at 4585.971 kb on - strand, within Pf6N2E2_3948 at 4585.971 kb on - strand, within Pf6N2E2_3948 at 4585.971 kb on - strand, within Pf6N2E2_3948 at 4586.158 kb on + strand, within Pf6N2E2_3948 at 4586.158 kb on + strand, within Pf6N2E2_3948 at 4586.158 kb on + strand, within Pf6N2E2_3948 at 4586.158 kb on + strand, within Pf6N2E2_3948 at 4586.408 kb on + strand, within Pf6N2E2_3948 at 4586.483 kb on - strand, within Pf6N2E2_3948 at 4586.497 kb on + strand, within Pf6N2E2_3948 at 4586.498 kb on - strand, within Pf6N2E2_3948 at 4586.498 kb on - strand, within Pf6N2E2_3948 at 4586.509 kb on + strand, within Pf6N2E2_3948 at 4586.509 kb on + strand, within Pf6N2E2_3948 at 4586.510 kb on - strand, within Pf6N2E2_3948 at 4586.566 kb on + strand, within Pf6N2E2_3948 at 4586.566 kb on + strand, within Pf6N2E2_3948 at 4586.566 kb on + strand, within Pf6N2E2_3948 at 4586.758 kb on + strand, within Pf6N2E2_3948 at 4586.758 kb on + strand, within Pf6N2E2_3948 at 4586.759 kb on - strand, within Pf6N2E2_3948 at 4586.759 kb on - strand, within Pf6N2E2_3948 at 4586.875 kb on - strand, within Pf6N2E2_3948 at 4587.085 kb on + strand, within Pf6N2E2_3948 at 4587.086 kb on - strand, within Pf6N2E2_3948 at 4587.086 kb on - strand, within Pf6N2E2_3948 at 4587.086 kb on - strand, within Pf6N2E2_3948 at 4587.433 kb on + strand at 4587.433 kb on + strand at 4587.433 kb on + strand at 4587.433 kb on + strand at 4587.433 kb on + strand at 4587.433 kb on + strand at 4587.434 kb on - strand at 4587.434 kb on - strand at 4587.566 kb on + strand at 4587.567 kb on - strand at 4587.568 kb on + strand at 4587.568 kb on + strand at 4587.568 kb on + strand at 4587.569 kb on - strand at 4587.569 kb on - strand at 4587.569 kb on - strand at 4587.569 kb on - strand at 4587.569 kb on - strand at 4587.668 kb on + strand at 4587.668 kb on + strand at 4587.669 kb on - strand at 4587.680 kb on + strand at 4587.680 kb on + strand at 4587.680 kb on + strand at 4587.680 kb on + strand at 4587.680 kb on + strand at 4587.681 kb on - strand at 4587.681 kb on - strand at 4587.709 kb on + strand at 4587.709 kb on + strand at 4587.710 kb on - strand at 4587.710 kb on - strand at 4587.744 kb on - strand at 4587.870 kb on - strand at 4587.884 kb on + strand at 4587.884 kb on + strand at 4587.885 kb on - strand at 4587.918 kb on + strand at 4587.919 kb on - strand at 4588.175 kb on + strand, within Pf6N2E2_3949 at 4588.175 kb on + strand, within Pf6N2E2_3949 at 4588.176 kb on - strand, within Pf6N2E2_3949 at 4588.176 kb on - strand, within Pf6N2E2_3949 at 4588.176 kb on - strand, within Pf6N2E2_3949 at 4588.325 kb on + strand, within Pf6N2E2_3949 at 4588.325 kb on + strand, within Pf6N2E2_3949 at 4588.326 kb on - strand, within Pf6N2E2_3949
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 4,585,024 - Pf6N2E2_3947 0.76 -1.3 4,585,071 + Pf6N2E2_3947 0.87 -1.6 4,585,074 + Pf6N2E2_3947 0.87 -1.5 4,585,146 + +1.2 4,585,146 + -0.6 4,585,146 + +1.5 4,585,146 + -2.7 4,585,146 + -1.5 4,585,146 + +2.3 4,585,147 - -2.0 4,585,147 - +1.0 4,585,147 - -2.0 4,585,147 - +1.3 4,585,147 - +0.8 4,585,147 - +0.2 4,585,147 - -0.4 4,585,147 - -1.9 4,585,180 + -1.1 4,585,717 + Pf6N2E2_3948 0.23 -3.1 4,585,717 + Pf6N2E2_3948 0.23 -1.2 4,585,717 + Pf6N2E2_3948 0.23 -3.6 4,585,717 + Pf6N2E2_3948 0.23 -2.5 4,585,718 - Pf6N2E2_3948 0.23 -1.3 4,585,718 - Pf6N2E2_3948 0.23 -1.9 4,585,718 - Pf6N2E2_3948 0.23 -4.1 4,585,718 - Pf6N2E2_3948 0.23 -1.3 4,585,718 - Pf6N2E2_3948 0.23 -2.5 4,585,718 - Pf6N2E2_3948 0.23 -2.6 4,585,970 + Pf6N2E2_3948 0.34 -3.9 4,585,970 + Pf6N2E2_3948 0.34 -3.2 4,585,971 - Pf6N2E2_3948 0.34 -0.6 4,585,971 - Pf6N2E2_3948 0.34 -2.7 4,585,971 - Pf6N2E2_3948 0.34 -2.4 4,586,158 + Pf6N2E2_3948 0.42 -2.7 4,586,158 + Pf6N2E2_3948 0.42 -2.1 4,586,158 + Pf6N2E2_3948 0.42 -0.5 4,586,158 + Pf6N2E2_3948 0.42 -2.2 4,586,408 + Pf6N2E2_3948 0.54 -2.2 4,586,483 - Pf6N2E2_3948 0.57 -3.0 4,586,497 + Pf6N2E2_3948 0.58 -1.7 4,586,498 - Pf6N2E2_3948 0.58 -2.1 4,586,498 - Pf6N2E2_3948 0.58 -3.3 4,586,509 + Pf6N2E2_3948 0.58 -1.3 4,586,509 + Pf6N2E2_3948 0.58 -2.5 4,586,510 - Pf6N2E2_3948 0.58 -2.5 4,586,566 + Pf6N2E2_3948 0.61 -2.0 4,586,566 + Pf6N2E2_3948 0.61 -1.1 4,586,566 + Pf6N2E2_3948 0.61 -1.1 4,586,758 + Pf6N2E2_3948 0.69 -1.6 4,586,758 + Pf6N2E2_3948 0.69 -2.7 4,586,759 - Pf6N2E2_3948 0.70 -2.1 4,586,759 - Pf6N2E2_3948 0.70 -2.4 4,586,875 - Pf6N2E2_3948 0.75 -3.4 4,587,085 + Pf6N2E2_3948 0.84 -3.1 4,587,086 - Pf6N2E2_3948 0.84 -2.3 4,587,086 - Pf6N2E2_3948 0.84 -2.3 4,587,086 - Pf6N2E2_3948 0.84 +0.1 4,587,433 + -0.1 4,587,433 + +1.5 4,587,433 + -1.5 4,587,433 + -1.1 4,587,433 + -2.0 4,587,433 + -0.4 4,587,434 - +1.1 4,587,434 - -1.2 4,587,566 + +0.6 4,587,567 - -0.0 4,587,568 + -0.9 4,587,568 + -0.5 4,587,568 + -0.5 4,587,569 - -2.1 4,587,569 - -2.8 4,587,569 - -1.2 4,587,569 - -0.6 4,587,569 - -0.4 4,587,668 + +0.5 4,587,668 + +0.3 4,587,669 - -2.8 4,587,680 + -0.2 4,587,680 + -0.0 4,587,680 + -1.4 4,587,680 + -0.7 4,587,680 + -2.4 4,587,681 - +1.3 4,587,681 - -1.5 4,587,709 + +0.4 4,587,709 + -0.5 4,587,710 - +1.0 4,587,710 - -1.3 4,587,744 - -1.1 4,587,870 - +0.0 4,587,884 + -0.3 4,587,884 + -0.5 4,587,885 - -0.8 4,587,918 + +1.2 4,587,919 - -2.3 4,588,175 + Pf6N2E2_3949 0.18 +1.7 4,588,175 + Pf6N2E2_3949 0.18 +0.5 4,588,176 - Pf6N2E2_3949 0.18 -0.5 4,588,176 - Pf6N2E2_3949 0.18 +0.7 4,588,176 - Pf6N2E2_3949 0.18 -2.5 4,588,325 + Pf6N2E2_3949 0.22 -0.1 4,588,325 + Pf6N2E2_3949 0.22 -0.8 4,588,326 - Pf6N2E2_3949 0.23 +1.1
Or see this region's nucleotide sequence