Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3165 and Pf6N2E2_3166 are separated by 264 nucleotides Pf6N2E2_3166 and Pf6N2E2_3167 are separated by 70 nucleotides
Pf6N2E2_3165 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain, at 3,659,150 to 3,660,619
_3165
Pf6N2E2_3166 - ABC-type sugar transport systems, ATPase components, at 3,660,884 to 3,661,432
_3166
Pf6N2E2_3167 - putative membrane protein, at 3,661,503 to 3,662,270
_3167
Position (kb)
3660
3661
3662 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3660.688 kb on - strand at 3660.727 kb on - strand at 3660.747 kb on - strand at 3660.885 kb on + strand at 3660.886 kb on - strand at 3660.886 kb on - strand at 3660.886 kb on - strand at 3660.886 kb on - strand at 3660.886 kb on - strand at 3661.180 kb on + strand, within Pf6N2E2_3166 at 3661.180 kb on + strand, within Pf6N2E2_3166 at 3661.181 kb on - strand, within Pf6N2E2_3166 at 3661.181 kb on - strand, within Pf6N2E2_3166 at 3661.181 kb on - strand, within Pf6N2E2_3166 at 3661.181 kb on - strand, within Pf6N2E2_3166 at 3661.181 kb on - strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.182 kb on + strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.183 kb on - strand, within Pf6N2E2_3166 at 3661.484 kb on - strand at 3661.484 kb on - strand at 3661.484 kb on - strand at 3661.516 kb on + strand at 3661.517 kb on - strand at 3661.668 kb on + strand, within Pf6N2E2_3167 at 3661.669 kb on - strand, within Pf6N2E2_3167 at 3661.669 kb on - strand, within Pf6N2E2_3167 at 3661.679 kb on - strand, within Pf6N2E2_3167 at 3661.679 kb on - strand, within Pf6N2E2_3167 at 3661.695 kb on - strand, within Pf6N2E2_3167 at 3661.783 kb on + strand, within Pf6N2E2_3167 at 3661.783 kb on + strand, within Pf6N2E2_3167 at 3661.784 kb on - strand, within Pf6N2E2_3167 at 3661.784 kb on - strand, within Pf6N2E2_3167 at 3661.784 kb on - strand, within Pf6N2E2_3167 at 3661.784 kb on - strand, within Pf6N2E2_3167 at 3661.792 kb on + strand, within Pf6N2E2_3167 at 3661.792 kb on + strand, within Pf6N2E2_3167 at 3661.794 kb on + strand, within Pf6N2E2_3167 at 3661.794 kb on + strand, within Pf6N2E2_3167 at 3661.794 kb on + strand, within Pf6N2E2_3167 at 3661.794 kb on + strand, within Pf6N2E2_3167 at 3661.794 kb on + strand, within Pf6N2E2_3167 at 3661.795 kb on - strand, within Pf6N2E2_3167 at 3661.795 kb on - strand, within Pf6N2E2_3167 at 3661.903 kb on + strand, within Pf6N2E2_3167 at 3661.904 kb on - strand, within Pf6N2E2_3167 at 3661.904 kb on - strand, within Pf6N2E2_3167 at 3661.904 kb on - strand, within Pf6N2E2_3167 at 3661.904 kb on - strand, within Pf6N2E2_3167 at 3661.904 kb on - strand, within Pf6N2E2_3167 at 3661.904 kb on - strand, within Pf6N2E2_3167 at 3661.904 kb on - strand, within Pf6N2E2_3167 at 3661.912 kb on + strand, within Pf6N2E2_3167 at 3662.188 kb on + strand, within Pf6N2E2_3167 at 3662.188 kb on + strand, within Pf6N2E2_3167 at 3662.188 kb on + strand, within Pf6N2E2_3167 at 3662.188 kb on + strand, within Pf6N2E2_3167 at 3662.189 kb on - strand, within Pf6N2E2_3167 at 3662.189 kb on - strand, within Pf6N2E2_3167 at 3662.189 kb on - strand, within Pf6N2E2_3167 at 3662.324 kb on + strand at 3662.324 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.399 kb on + strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand at 3662.400 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 3,660,688 - +1.1 3,660,727 - +0.8 3,660,747 - +0.8 3,660,885 + +0.9 3,660,886 - -1.4 3,660,886 - +1.0 3,660,886 - -1.1 3,660,886 - +1.3 3,660,886 - -1.7 3,661,180 + Pf6N2E2_3166 0.54 -1.7 3,661,180 + Pf6N2E2_3166 0.54 -1.1 3,661,181 - Pf6N2E2_3166 0.54 +0.9 3,661,181 - Pf6N2E2_3166 0.54 +1.7 3,661,181 - Pf6N2E2_3166 0.54 -2.3 3,661,181 - Pf6N2E2_3166 0.54 +1.7 3,661,181 - Pf6N2E2_3166 0.54 +2.0 3,661,182 + Pf6N2E2_3166 0.54 -2.2 3,661,182 + +0.9 3,661,182 + Pf6N2E2_3166 0.54 -0.3 3,661,182 + Pf6N2E2_3166 0.54 -2.4 3,661,182 + Pf6N2E2_3166 0.54 +2.1 3,661,182 + Pf6N2E2_3166 0.54 +1.7 3,661,182 + Pf6N2E2_3166 0.54 +0.1 3,661,182 + Pf6N2E2_3166 0.54 -1.3 3,661,182 + Pf6N2E2_3166 0.54 +1.7 3,661,182 + Pf6N2E2_3166 0.54 -0.1 3,661,182 + Pf6N2E2_3166 0.54 +2.5 3,661,182 + Pf6N2E2_3166 0.54 +2.3 3,661,182 + Pf6N2E2_3166 0.54 +0.8 3,661,182 + Pf6N2E2_3166 0.54 -0.2 3,661,183 - Pf6N2E2_3166 0.54 -0.6 3,661,183 - Pf6N2E2_3166 0.54 +1.2 3,661,183 - Pf6N2E2_3166 0.54 +0.8 3,661,183 - Pf6N2E2_3166 0.54 +2.5 3,661,183 - Pf6N2E2_3166 0.54 -0.7 3,661,183 - Pf6N2E2_3166 0.54 +1.6 3,661,183 - Pf6N2E2_3166 0.54 +0.1 3,661,183 - Pf6N2E2_3166 0.54 -0.3 3,661,183 - Pf6N2E2_3166 0.54 +0.6 3,661,183 - Pf6N2E2_3166 0.54 +1.8 3,661,183 - Pf6N2E2_3166 0.54 -1.7 3,661,183 - Pf6N2E2_3166 0.54 -0.0 3,661,484 - -1.8 3,661,484 - -0.5 3,661,484 - -3.0 3,661,516 + -2.2 3,661,517 - +1.0 3,661,668 + Pf6N2E2_3167 0.21 +1.9 3,661,669 - Pf6N2E2_3167 0.22 -1.8 3,661,669 - Pf6N2E2_3167 0.22 -0.6 3,661,679 - Pf6N2E2_3167 0.23 -0.5 3,661,679 - Pf6N2E2_3167 0.23 -0.9 3,661,695 - Pf6N2E2_3167 0.25 -2.3 3,661,783 + Pf6N2E2_3167 0.36 -0.1 3,661,783 + Pf6N2E2_3167 0.36 +1.5 3,661,784 - Pf6N2E2_3167 0.37 -2.4 3,661,784 - Pf6N2E2_3167 0.37 -2.5 3,661,784 - Pf6N2E2_3167 0.37 -1.3 3,661,784 - Pf6N2E2_3167 0.37 +1.8 3,661,792 + Pf6N2E2_3167 0.38 +1.3 3,661,792 + Pf6N2E2_3167 0.38 -2.3 3,661,794 + Pf6N2E2_3167 0.38 -1.0 3,661,794 + Pf6N2E2_3167 0.38 +1.6 3,661,794 + Pf6N2E2_3167 0.38 -1.1 3,661,794 + Pf6N2E2_3167 0.38 +0.9 3,661,794 + Pf6N2E2_3167 0.38 -2.0 3,661,795 - Pf6N2E2_3167 0.38 -0.3 3,661,795 - Pf6N2E2_3167 0.38 -0.0 3,661,903 + Pf6N2E2_3167 0.52 +1.4 3,661,904 - Pf6N2E2_3167 0.52 -1.4 3,661,904 - Pf6N2E2_3167 0.52 -0.3 3,661,904 - Pf6N2E2_3167 0.52 +0.4 3,661,904 - Pf6N2E2_3167 0.52 -1.1 3,661,904 - Pf6N2E2_3167 0.52 +2.2 3,661,904 - Pf6N2E2_3167 0.52 +0.9 3,661,904 - Pf6N2E2_3167 0.52 -0.4 3,661,912 + Pf6N2E2_3167 0.53 -2.1 3,662,188 + Pf6N2E2_3167 0.89 +0.6 3,662,188 + Pf6N2E2_3167 0.89 -2.6 3,662,188 + Pf6N2E2_3167 0.89 -0.4 3,662,188 + Pf6N2E2_3167 0.89 +1.1 3,662,189 - Pf6N2E2_3167 0.89 +0.2 3,662,189 - Pf6N2E2_3167 0.89 +0.1 3,662,189 - Pf6N2E2_3167 0.89 +1.0 3,662,324 + +1.1 3,662,324 + -0.7 3,662,399 + -1.9 3,662,399 + +0.2 3,662,399 + +1.6 3,662,399 + +1.7 3,662,399 + +0.1 3,662,399 + -1.0 3,662,399 + +1.3 3,662,399 + -0.3 3,662,399 + +0.2 3,662,399 + +1.5 3,662,400 - -0.1 3,662,400 - +1.7 3,662,400 - +2.1 3,662,400 - +2.0 3,662,400 - +0.6 3,662,400 - +2.1 3,662,400 - -1.0 3,662,400 - -0.9 3,662,400 - -3.3 3,662,400 - +1.1 3,662,400 - -2.1 3,662,400 - +2.9
Or see this region's nucleotide sequence