Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2807 and Pf6N2E2_2808 overlap by 1 nucleotides Pf6N2E2_2808 and Pf6N2E2_2809 are separated by 252 nucleotides Pf6N2E2_2809 and Pf6N2E2_2810 are separated by 116 nucleotides
Pf6N2E2_2807 - FIG126011: Hypothetical protein, at 3,293,476 to 3,294,945
_2807
Pf6N2E2_2808 - LemA family protein, at 3,294,945 to 3,295,553
_2808
Pf6N2E2_2809 - Periplasmic beta-glucosidase (EC 3.2.1.21), at 3,295,806 to 3,298,097
_2809
Pf6N2E2_2810 - Cardiolipin synthetase (EC 2.7.8.-), at 3,298,214 to 3,299,371
_2810
Position (kb)
3295
3296
3297
3298
3299 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3294.901 kb on + strand at 3294.902 kb on - strand at 3294.902 kb on - strand at 3294.902 kb on - strand at 3294.902 kb on - strand at 3294.920 kb on + strand at 3294.920 kb on + strand at 3294.920 kb on + strand at 3294.920 kb on + strand at 3294.921 kb on - strand at 3294.921 kb on - strand at 3294.921 kb on - strand at 3294.934 kb on + strand at 3294.934 kb on + strand at 3295.021 kb on + strand, within Pf6N2E2_2808 at 3295.021 kb on + strand, within Pf6N2E2_2808 at 3295.022 kb on - strand, within Pf6N2E2_2808 at 3295.022 kb on - strand, within Pf6N2E2_2808 at 3295.072 kb on + strand, within Pf6N2E2_2808 at 3295.072 kb on + strand, within Pf6N2E2_2808 at 3295.072 kb on + strand, within Pf6N2E2_2808 at 3295.073 kb on - strand, within Pf6N2E2_2808 at 3295.073 kb on - strand, within Pf6N2E2_2808 at 3295.073 kb on - strand, within Pf6N2E2_2808 at 3295.073 kb on - strand, within Pf6N2E2_2808 at 3295.073 kb on - strand, within Pf6N2E2_2808 at 3295.409 kb on - strand, within Pf6N2E2_2808 at 3295.409 kb on - strand, within Pf6N2E2_2808 at 3295.599 kb on + strand at 3295.599 kb on + strand at 3295.599 kb on + strand at 3295.600 kb on - strand at 3295.600 kb on - strand at 3295.600 kb on - strand at 3295.600 kb on - strand at 3295.600 kb on - strand at 3295.622 kb on - strand at 3295.622 kb on - strand at 3295.682 kb on + strand at 3295.682 kb on + strand at 3295.682 kb on + strand at 3295.683 kb on - strand at 3295.683 kb on - strand at 3295.744 kb on + strand at 3295.745 kb on - strand at 3295.745 kb on - strand at 3295.746 kb on + strand at 3295.746 kb on + strand at 3295.746 kb on + strand at 3295.747 kb on - strand at 3295.747 kb on - strand at 3295.747 kb on - strand at 3295.785 kb on - strand at 3295.801 kb on + strand at 3295.859 kb on - strand at 3295.885 kb on + strand at 3296.119 kb on - strand, within Pf6N2E2_2809 at 3296.196 kb on + strand, within Pf6N2E2_2809 at 3296.196 kb on + strand, within Pf6N2E2_2809 at 3296.249 kb on + strand, within Pf6N2E2_2809 at 3296.249 kb on + strand, within Pf6N2E2_2809 at 3296.249 kb on + strand, within Pf6N2E2_2809 at 3296.249 kb on + strand, within Pf6N2E2_2809 at 3296.250 kb on - strand, within Pf6N2E2_2809 at 3296.325 kb on + strand, within Pf6N2E2_2809 at 3296.325 kb on + strand, within Pf6N2E2_2809 at 3296.326 kb on - strand, within Pf6N2E2_2809 at 3296.326 kb on - strand, within Pf6N2E2_2809 at 3296.326 kb on - strand, within Pf6N2E2_2809 at 3296.326 kb on - strand, within Pf6N2E2_2809 at 3296.326 kb on - strand, within Pf6N2E2_2809 at 3296.326 kb on - strand, within Pf6N2E2_2809 at 3296.454 kb on + strand, within Pf6N2E2_2809 at 3296.454 kb on + strand, within Pf6N2E2_2809 at 3296.454 kb on + strand, within Pf6N2E2_2809 at 3296.455 kb on - strand, within Pf6N2E2_2809 at 3296.455 kb on - strand, within Pf6N2E2_2809 at 3296.455 kb on - strand, within Pf6N2E2_2809 at 3296.487 kb on + strand, within Pf6N2E2_2809 at 3296.761 kb on - strand, within Pf6N2E2_2809 at 3296.850 kb on + strand, within Pf6N2E2_2809 at 3296.850 kb on + strand, within Pf6N2E2_2809 at 3296.850 kb on + strand, within Pf6N2E2_2809 at 3296.851 kb on - strand, within Pf6N2E2_2809 at 3296.851 kb on - strand, within Pf6N2E2_2809 at 3296.919 kb on + strand, within Pf6N2E2_2809 at 3296.920 kb on - strand, within Pf6N2E2_2809 at 3296.920 kb on - strand, within Pf6N2E2_2809 at 3297.065 kb on + strand, within Pf6N2E2_2809 at 3297.066 kb on - strand, within Pf6N2E2_2809 at 3297.066 kb on - strand, within Pf6N2E2_2809 at 3297.162 kb on + strand, within Pf6N2E2_2809 at 3297.244 kb on + strand, within Pf6N2E2_2809 at 3297.244 kb on + strand, within Pf6N2E2_2809 at 3297.244 kb on + strand, within Pf6N2E2_2809 at 3297.245 kb on - strand, within Pf6N2E2_2809 at 3297.286 kb on + strand, within Pf6N2E2_2809 at 3297.326 kb on - strand, within Pf6N2E2_2809 at 3297.564 kb on + strand, within Pf6N2E2_2809 at 3297.564 kb on + strand, within Pf6N2E2_2809 at 3297.565 kb on - strand, within Pf6N2E2_2809 at 3297.565 kb on - strand, within Pf6N2E2_2809 at 3297.624 kb on + strand, within Pf6N2E2_2809 at 3297.624 kb on + strand, within Pf6N2E2_2809 at 3297.624 kb on + strand, within Pf6N2E2_2809 at 3297.625 kb on - strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.627 kb on + strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.628 kb on - strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.678 kb on + strand, within Pf6N2E2_2809 at 3297.679 kb on - strand, within Pf6N2E2_2809 at 3297.691 kb on - strand, within Pf6N2E2_2809 at 3297.741 kb on + strand, within Pf6N2E2_2809 at 3297.742 kb on - strand, within Pf6N2E2_2809 at 3297.867 kb on + strand, within Pf6N2E2_2809 at 3297.867 kb on + strand, within Pf6N2E2_2809 at 3297.867 kb on + strand, within Pf6N2E2_2809 at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3297.868 kb on - strand at 3298.014 kb on + strand at 3298.014 kb on + strand at 3298.015 kb on - strand at 3298.015 kb on - strand at 3298.042 kb on + strand at 3298.042 kb on + strand at 3298.043 kb on - strand at 3298.043 kb on - strand at 3298.178 kb on + strand at 3298.179 kb on - strand at 3298.198 kb on + strand at 3298.199 kb on - strand at 3298.199 kb on - strand at 3298.199 kb on - strand at 3298.199 kb on - strand at 3298.672 kb on - strand, within Pf6N2E2_2810 at 3298.917 kb on + strand, within Pf6N2E2_2810 at 3299.079 kb on + strand, within Pf6N2E2_2810 at 3299.087 kb on + strand, within Pf6N2E2_2810 at 3299.088 kb on - strand, within Pf6N2E2_2810 at 3299.088 kb on - strand, within Pf6N2E2_2810
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 3,294,901 + +2.7 3,294,902 - -0.5 3,294,902 - -2.2 3,294,902 - +0.7 3,294,902 - -0.4 3,294,920 + +1.6 3,294,920 + +1.9 3,294,920 + +1.5 3,294,920 + +0.7 3,294,921 - -1.1 3,294,921 - -0.8 3,294,921 - +1.0 3,294,934 + -1.9 3,294,934 + +0.2 3,295,021 + Pf6N2E2_2808 0.12 -1.4 3,295,021 + Pf6N2E2_2808 0.12 -0.1 3,295,022 - Pf6N2E2_2808 0.13 +2.0 3,295,022 - Pf6N2E2_2808 0.13 +0.9 3,295,072 + Pf6N2E2_2808 0.21 -0.2 3,295,072 + Pf6N2E2_2808 0.21 +0.7 3,295,072 + Pf6N2E2_2808 0.21 +0.4 3,295,073 - Pf6N2E2_2808 0.21 -1.5 3,295,073 - Pf6N2E2_2808 0.21 -1.7 3,295,073 - Pf6N2E2_2808 0.21 +1.5 3,295,073 - Pf6N2E2_2808 0.21 -2.4 3,295,073 - Pf6N2E2_2808 0.21 -0.9 3,295,409 - Pf6N2E2_2808 0.76 -1.3 3,295,409 - Pf6N2E2_2808 0.76 -0.9 3,295,599 + -2.1 3,295,599 + +0.6 3,295,599 + -0.7 3,295,600 - +0.7 3,295,600 - -1.7 3,295,600 - -1.1 3,295,600 - +0.6 3,295,600 - -1.5 3,295,622 - -2.6 3,295,622 - -0.4 3,295,682 + -1.2 3,295,682 + -0.2 3,295,682 + +0.6 3,295,683 - -0.9 3,295,683 - -1.2 3,295,744 + +1.8 3,295,745 - -2.0 3,295,745 - +0.6 3,295,746 + -0.4 3,295,746 + -0.1 3,295,746 + +0.4 3,295,747 - -0.7 3,295,747 - +0.6 3,295,747 - +0.5 3,295,785 - -0.1 3,295,801 + +1.5 3,295,859 - +1.1 3,295,885 + +2.8 3,296,119 - Pf6N2E2_2809 0.14 +0.3 3,296,196 + Pf6N2E2_2809 0.17 +0.9 3,296,196 + Pf6N2E2_2809 0.17 -0.6 3,296,249 + Pf6N2E2_2809 0.19 +0.4 3,296,249 + Pf6N2E2_2809 0.19 -0.7 3,296,249 + Pf6N2E2_2809 0.19 +0.3 3,296,249 + Pf6N2E2_2809 0.19 -1.4 3,296,250 - Pf6N2E2_2809 0.19 +0.0 3,296,325 + Pf6N2E2_2809 0.23 +0.2 3,296,325 + Pf6N2E2_2809 0.23 -0.4 3,296,326 - Pf6N2E2_2809 0.23 -2.2 3,296,326 - Pf6N2E2_2809 0.23 +1.4 3,296,326 - Pf6N2E2_2809 0.23 -0.8 3,296,326 - Pf6N2E2_2809 0.23 -1.4 3,296,326 - Pf6N2E2_2809 0.23 +0.4 3,296,326 - Pf6N2E2_2809 0.23 -1.2 3,296,454 + Pf6N2E2_2809 0.28 +2.0 3,296,454 + Pf6N2E2_2809 0.28 -1.5 3,296,454 + Pf6N2E2_2809 0.28 +0.5 3,296,455 - Pf6N2E2_2809 0.28 -2.4 3,296,455 - Pf6N2E2_2809 0.28 +2.0 3,296,455 - Pf6N2E2_2809 0.28 -1.6 3,296,487 + Pf6N2E2_2809 0.30 -0.1 3,296,761 - Pf6N2E2_2809 0.42 +0.8 3,296,850 + Pf6N2E2_2809 0.46 -1.4 3,296,850 + Pf6N2E2_2809 0.46 -1.2 3,296,850 + Pf6N2E2_2809 0.46 -2.1 3,296,851 - Pf6N2E2_2809 0.46 -1.9 3,296,851 - Pf6N2E2_2809 0.46 -1.5 3,296,919 + Pf6N2E2_2809 0.49 +0.1 3,296,920 - Pf6N2E2_2809 0.49 -0.0 3,296,920 - Pf6N2E2_2809 0.49 +0.8 3,297,065 + Pf6N2E2_2809 0.55 +0.4 3,297,066 - Pf6N2E2_2809 0.55 -0.8 3,297,066 - Pf6N2E2_2809 0.55 -1.0 3,297,162 + Pf6N2E2_2809 0.59 -1.6 3,297,244 + Pf6N2E2_2809 0.63 -1.2 3,297,244 + Pf6N2E2_2809 0.63 +1.3 3,297,244 + Pf6N2E2_2809 0.63 +0.3 3,297,245 - Pf6N2E2_2809 0.63 -1.2 3,297,286 + Pf6N2E2_2809 0.65 -0.1 3,297,326 - Pf6N2E2_2809 0.66 -0.3 3,297,564 + Pf6N2E2_2809 0.77 +0.4 3,297,564 + Pf6N2E2_2809 0.77 -0.7 3,297,565 - Pf6N2E2_2809 0.77 -0.3 3,297,565 - Pf6N2E2_2809 0.77 -1.2 3,297,624 + Pf6N2E2_2809 0.79 -0.9 3,297,624 + Pf6N2E2_2809 0.79 -0.8 3,297,624 + Pf6N2E2_2809 0.79 -0.8 3,297,625 - Pf6N2E2_2809 0.79 -0.1 3,297,627 + Pf6N2E2_2809 0.79 -2.1 3,297,627 + Pf6N2E2_2809 0.79 -0.1 3,297,627 + Pf6N2E2_2809 0.79 -0.2 3,297,627 + Pf6N2E2_2809 0.79 -0.7 3,297,628 - Pf6N2E2_2809 0.79 +0.4 3,297,628 - Pf6N2E2_2809 0.79 -2.0 3,297,628 - Pf6N2E2_2809 0.79 -2.2 3,297,628 - Pf6N2E2_2809 0.79 -0.7 3,297,628 - Pf6N2E2_2809 0.79 +2.0 3,297,628 - Pf6N2E2_2809 0.79 -0.9 3,297,628 - Pf6N2E2_2809 0.79 +1.8 3,297,678 + Pf6N2E2_2809 0.82 +2.0 3,297,678 + Pf6N2E2_2809 0.82 -0.2 3,297,678 + Pf6N2E2_2809 0.82 -0.3 3,297,678 + Pf6N2E2_2809 0.82 -2.1 3,297,678 + Pf6N2E2_2809 0.82 -1.8 3,297,679 - Pf6N2E2_2809 0.82 +0.9 3,297,691 - Pf6N2E2_2809 0.82 -2.9 3,297,741 + Pf6N2E2_2809 0.84 +0.8 3,297,742 - Pf6N2E2_2809 0.84 -1.0 3,297,867 + Pf6N2E2_2809 0.90 +0.4 3,297,867 + Pf6N2E2_2809 0.90 +1.6 3,297,867 + Pf6N2E2_2809 0.90 -1.1 3,297,868 - +0.1 3,297,868 - -1.9 3,297,868 - -0.1 3,297,868 - +1.4 3,297,868 - -0.3 3,297,868 - -1.0 3,297,868 - +0.1 3,297,868 - +0.5 3,298,014 + -1.0 3,298,014 + -2.5 3,298,015 - +0.5 3,298,015 - -1.8 3,298,042 + +1.4 3,298,042 + -2.9 3,298,043 - +0.8 3,298,043 - -0.2 3,298,178 + +1.8 3,298,179 - +0.6 3,298,198 + -0.4 3,298,199 - -1.7 3,298,199 - -0.2 3,298,199 - -1.3 3,298,199 - -1.1 3,298,672 - Pf6N2E2_2810 0.40 -0.9 3,298,917 + Pf6N2E2_2810 0.61 -0.6 3,299,079 + Pf6N2E2_2810 0.75 +1.0 3,299,087 + Pf6N2E2_2810 0.75 +0.3 3,299,088 - Pf6N2E2_2810 0.75 -1.5 3,299,088 - Pf6N2E2_2810 0.75 -1.9
Or see this region's nucleotide sequence