Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2651 and Pf6N2E2_2652 are separated by 244 nucleotides Pf6N2E2_2652 and Pf6N2E2_2653 are separated by 158 nucleotides Pf6N2E2_2653 and Pf6N2E2_2654 are separated by 2 nucleotides
Pf6N2E2_2651 - ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing, at 3,122,074 to 3,124,233
_2651
Pf6N2E2_2652 - HlyD family secretion protein, at 3,124,478 to 3,125,842
_2652
Pf6N2E2_2653 - FIG00955751: hypothetical protein, at 3,126,001 to 3,126,597
_2653
Pf6N2E2_2654 - Transcriptional regulator GbuR, at 3,126,600 to 3,127,493
_2654
Position (kb)
3124
3125
3126 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3123.547 kb on + strand, within Pf6N2E2_2651 at 3123.547 kb on + strand, within Pf6N2E2_2651 at 3123.547 kb on + strand, within Pf6N2E2_2651 at 3123.548 kb on - strand, within Pf6N2E2_2651 at 3123.548 kb on - strand, within Pf6N2E2_2651 at 3123.548 kb on - strand, within Pf6N2E2_2651 at 3123.673 kb on + strand, within Pf6N2E2_2651 at 3123.673 kb on + strand, within Pf6N2E2_2651 at 3123.673 kb on + strand, within Pf6N2E2_2651 at 3123.674 kb on - strand, within Pf6N2E2_2651 at 3123.674 kb on - strand, within Pf6N2E2_2651 at 3123.674 kb on - strand, within Pf6N2E2_2651 at 3123.757 kb on + strand, within Pf6N2E2_2651 at 3123.758 kb on - strand, within Pf6N2E2_2651 at 3123.823 kb on + strand, within Pf6N2E2_2651 at 3123.823 kb on + strand, within Pf6N2E2_2651 at 3123.823 kb on + strand, within Pf6N2E2_2651 at 3123.823 kb on + strand, within Pf6N2E2_2651 at 3123.823 kb on + strand, within Pf6N2E2_2651 at 3123.824 kb on - strand, within Pf6N2E2_2651 at 3123.824 kb on - strand, within Pf6N2E2_2651 at 3124.073 kb on + strand at 3124.073 kb on + strand at 3124.073 kb on + strand at 3124.073 kb on + strand at 3124.074 kb on - strand at 3124.074 kb on - strand at 3124.074 kb on - strand at 3124.074 kb on - strand at 3124.074 kb on - strand at 3124.406 kb on + strand at 3124.406 kb on + strand at 3124.407 kb on - strand at 3124.458 kb on + strand at 3124.515 kb on - strand at 3124.758 kb on + strand, within Pf6N2E2_2652 at 3124.758 kb on + strand, within Pf6N2E2_2652 at 3124.759 kb on - strand, within Pf6N2E2_2652 at 3124.759 kb on - strand, within Pf6N2E2_2652 at 3124.976 kb on + strand, within Pf6N2E2_2652 at 3124.977 kb on - strand, within Pf6N2E2_2652 at 3125.389 kb on + strand, within Pf6N2E2_2652 at 3125.390 kb on - strand, within Pf6N2E2_2652 at 3125.390 kb on - strand, within Pf6N2E2_2652 at 3125.588 kb on + strand, within Pf6N2E2_2652 at 3125.588 kb on + strand, within Pf6N2E2_2652 at 3125.597 kb on + strand, within Pf6N2E2_2652 at 3125.597 kb on + strand, within Pf6N2E2_2652 at 3125.597 kb on + strand, within Pf6N2E2_2652 at 3125.598 kb on - strand, within Pf6N2E2_2652 at 3125.598 kb on - strand, within Pf6N2E2_2652 at 3125.669 kb on + strand, within Pf6N2E2_2652 at 3125.669 kb on + strand, within Pf6N2E2_2652 at 3125.943 kb on + strand at 3125.944 kb on - strand at 3125.951 kb on - strand at 3126.003 kb on - strand at 3126.026 kb on + strand at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.320 kb on + strand, within Pf6N2E2_2653 at 3126.321 kb on - strand, within Pf6N2E2_2653 at 3126.321 kb on - strand, within Pf6N2E2_2653 at 3126.321 kb on - strand, within Pf6N2E2_2653 at 3126.321 kb on - strand, within Pf6N2E2_2653 at 3126.321 kb on - strand, within Pf6N2E2_2653 at 3126.321 kb on - strand, within Pf6N2E2_2653 at 3126.435 kb on + strand, within Pf6N2E2_2653 at 3126.435 kb on + strand, within Pf6N2E2_2653 at 3126.499 kb on + strand, within Pf6N2E2_2653 at 3126.499 kb on + strand, within Pf6N2E2_2653 at 3126.675 kb on + strand at 3126.675 kb on + strand at 3126.675 kb on + strand at 3126.676 kb on - strand at 3126.760 kb on + strand, within Pf6N2E2_2654 at 3126.761 kb on - strand, within Pf6N2E2_2654 at 3126.785 kb on - strand, within Pf6N2E2_2654
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 3,123,547 + Pf6N2E2_2651 0.68 +2.7 3,123,547 + Pf6N2E2_2651 0.68 +0.6 3,123,547 + Pf6N2E2_2651 0.68 -2.2 3,123,548 - Pf6N2E2_2651 0.68 -3.0 3,123,548 - Pf6N2E2_2651 0.68 +0.3 3,123,548 - Pf6N2E2_2651 0.68 +0.4 3,123,673 + Pf6N2E2_2651 0.74 +0.5 3,123,673 + Pf6N2E2_2651 0.74 -0.1 3,123,673 + Pf6N2E2_2651 0.74 +1.4 3,123,674 - Pf6N2E2_2651 0.74 +0.2 3,123,674 - Pf6N2E2_2651 0.74 +2.2 3,123,674 - Pf6N2E2_2651 0.74 +0.1 3,123,757 + Pf6N2E2_2651 0.78 -0.4 3,123,758 - Pf6N2E2_2651 0.78 -2.5 3,123,823 + Pf6N2E2_2651 0.81 +0.1 3,123,823 + Pf6N2E2_2651 0.81 +0.2 3,123,823 + Pf6N2E2_2651 0.81 -1.6 3,123,823 + Pf6N2E2_2651 0.81 +2.3 3,123,823 + Pf6N2E2_2651 0.81 -3.6 3,123,824 - Pf6N2E2_2651 0.81 +0.6 3,123,824 - Pf6N2E2_2651 0.81 -1.5 3,124,073 + +0.3 3,124,073 + +0.2 3,124,073 + +2.2 3,124,073 + -1.2 3,124,074 - +1.2 3,124,074 - +1.1 3,124,074 - -0.1 3,124,074 - +1.0 3,124,074 - +0.3 3,124,406 + -2.4 3,124,406 + -0.2 3,124,407 - -0.0 3,124,458 + +0.1 3,124,515 - -1.0 3,124,758 + Pf6N2E2_2652 0.21 +0.1 3,124,758 + Pf6N2E2_2652 0.21 +0.6 3,124,759 - Pf6N2E2_2652 0.21 -1.3 3,124,759 - Pf6N2E2_2652 0.21 +1.0 3,124,976 + Pf6N2E2_2652 0.36 -2.3 3,124,977 - Pf6N2E2_2652 0.37 -2.0 3,125,389 + Pf6N2E2_2652 0.67 -0.1 3,125,390 - Pf6N2E2_2652 0.67 +1.2 3,125,390 - Pf6N2E2_2652 0.67 +0.6 3,125,588 + Pf6N2E2_2652 0.81 -1.3 3,125,588 + Pf6N2E2_2652 0.81 -1.0 3,125,597 + Pf6N2E2_2652 0.82 -2.3 3,125,597 + Pf6N2E2_2652 0.82 -0.2 3,125,597 + Pf6N2E2_2652 0.82 +1.9 3,125,598 - Pf6N2E2_2652 0.82 -0.5 3,125,598 - Pf6N2E2_2652 0.82 -1.3 3,125,669 + Pf6N2E2_2652 0.87 +0.3 3,125,669 + Pf6N2E2_2652 0.87 -1.5 3,125,943 + +0.3 3,125,944 - -1.5 3,125,951 - -1.3 3,126,003 - +0.2 3,126,026 + +0.4 3,126,320 + Pf6N2E2_2653 0.53 -0.1 3,126,320 + Pf6N2E2_2653 0.53 +1.8 3,126,320 + Pf6N2E2_2653 0.53 -0.1 3,126,320 + Pf6N2E2_2653 0.53 -1.0 3,126,320 + Pf6N2E2_2653 0.53 +1.0 3,126,320 + Pf6N2E2_2653 0.53 -1.5 3,126,320 + Pf6N2E2_2653 0.53 +2.1 3,126,320 + Pf6N2E2_2653 0.53 +0.4 3,126,320 + Pf6N2E2_2653 0.53 -0.6 3,126,321 - Pf6N2E2_2653 0.54 +1.4 3,126,321 - Pf6N2E2_2653 0.54 +1.7 3,126,321 - Pf6N2E2_2653 0.54 +1.0 3,126,321 - Pf6N2E2_2653 0.54 -2.4 3,126,321 - Pf6N2E2_2653 0.54 -0.0 3,126,321 - Pf6N2E2_2653 0.54 -0.5 3,126,435 + Pf6N2E2_2653 0.73 -2.6 3,126,435 + Pf6N2E2_2653 0.73 -1.6 3,126,499 + Pf6N2E2_2653 0.83 -0.7 3,126,499 + Pf6N2E2_2653 0.83 +1.4 3,126,675 + -1.3 3,126,675 + +1.4 3,126,675 + -0.9 3,126,676 - +0.9 3,126,760 + Pf6N2E2_2654 0.18 -1.4 3,126,761 - Pf6N2E2_2654 0.18 +2.3 3,126,785 - Pf6N2E2_2654 0.21 -3.2
Or see this region's nucleotide sequence