Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2570 and Pf6N2E2_2571 are separated by 30 nucleotides Pf6N2E2_2571 and Pf6N2E2_2572 are separated by 36 nucleotides Pf6N2E2_2572 and Pf6N2E2_2573 are separated by 155 nucleotides Pf6N2E2_2573 and Pf6N2E2_2574 overlap by 4 nucleotides
Pf6N2E2_2570 - Signal transduction histidine kinase CheA (EC 2.7.3.-), at 3,027,571 to 3,029,829
_2570
Pf6N2E2_2571 - Chemotaxis response - phosphatase CheZ, at 3,029,860 to 3,030,627
_2571
Pf6N2E2_2572 - Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY, at 3,030,664 to 3,031,047
_2572
Pf6N2E2_2573 - RNA polymerase sigma factor for flagellar operon, at 3,031,203 to 3,031,946
_2573
Pf6N2E2_2574 - Flagellar synthesis regulator FleN, at 3,031,943 to 3,032,773
_2574
Position (kb)
3030
3031
3032 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3029.677 kb on + strand at 3029.677 kb on + strand at 3029.677 kb on + strand at 3029.678 kb on - strand at 3029.678 kb on - strand at 3029.678 kb on - strand at 3029.767 kb on + strand at 3029.767 kb on + strand at 3029.767 kb on + strand at 3029.767 kb on + strand at 3029.768 kb on - strand at 3029.843 kb on + strand at 3029.843 kb on + strand at 3029.843 kb on + strand at 3029.844 kb on - strand at 3029.854 kb on + strand at 3029.855 kb on - strand at 3029.910 kb on + strand at 3029.910 kb on + strand at 3029.910 kb on + strand at 3029.910 kb on + strand at 3029.911 kb on - strand at 3029.911 kb on - strand at 3029.911 kb on - strand at 3029.911 kb on - strand at 3029.911 kb on - strand at 3029.926 kb on - strand at 3030.125 kb on + strand, within Pf6N2E2_2571 at 3030.125 kb on + strand, within Pf6N2E2_2571 at 3030.126 kb on - strand, within Pf6N2E2_2571 at 3030.126 kb on - strand, within Pf6N2E2_2571 at 3030.126 kb on - strand, within Pf6N2E2_2571 at 3030.377 kb on + strand, within Pf6N2E2_2571 at 3030.378 kb on - strand, within Pf6N2E2_2571 at 3030.378 kb on - strand, within Pf6N2E2_2571 at 3030.378 kb on - strand, within Pf6N2E2_2571 at 3030.378 kb on - strand, within Pf6N2E2_2571 at 3030.378 kb on - strand, within Pf6N2E2_2571 at 3030.378 kb on - strand, within Pf6N2E2_2571 at 3030.645 kb on + strand at 3030.645 kb on + strand at 3030.645 kb on + strand at 3030.645 kb on + strand at 3030.646 kb on - strand at 3030.646 kb on - strand at 3030.734 kb on + strand, within Pf6N2E2_2572 at 3030.735 kb on - strand, within Pf6N2E2_2572 at 3030.743 kb on - strand, within Pf6N2E2_2572 at 3030.988 kb on + strand, within Pf6N2E2_2572 at 3031.067 kb on + strand at 3031.067 kb on + strand at 3031.068 kb on - strand at 3031.154 kb on + strand at 3031.155 kb on - strand at 3031.155 kb on - strand at 3031.261 kb on - strand at 3031.261 kb on - strand at 3031.334 kb on - strand, within Pf6N2E2_2573 at 3031.334 kb on - strand, within Pf6N2E2_2573 at 3031.334 kb on - strand, within Pf6N2E2_2573 at 3031.520 kb on + strand, within Pf6N2E2_2573 at 3031.520 kb on + strand, within Pf6N2E2_2573 at 3031.521 kb on - strand, within Pf6N2E2_2573 at 3031.540 kb on + strand, within Pf6N2E2_2573 at 3031.586 kb on + strand, within Pf6N2E2_2573 at 3031.604 kb on + strand, within Pf6N2E2_2573 at 3031.644 kb on - strand, within Pf6N2E2_2573 at 3031.723 kb on + strand, within Pf6N2E2_2573 at 3031.723 kb on + strand, within Pf6N2E2_2573 at 3031.724 kb on - strand, within Pf6N2E2_2573 at 3031.724 kb on - strand, within Pf6N2E2_2573 at 3031.724 kb on - strand, within Pf6N2E2_2573 at 3031.757 kb on - strand, within Pf6N2E2_2573 at 3031.846 kb on + strand, within Pf6N2E2_2573 at 3031.846 kb on + strand, within Pf6N2E2_2573 at 3031.847 kb on - strand, within Pf6N2E2_2573 at 3031.892 kb on - strand at 3031.919 kb on - strand at 3031.919 kb on - strand at 3031.931 kb on - strand at 3031.931 kb on - strand at 3031.947 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 3,029,677 + +0.8 3,029,677 + +0.4 3,029,677 + -1.1 3,029,678 - -1.0 3,029,678 - +0.6 3,029,678 - -1.7 3,029,767 + -1.3 3,029,767 + +0.4 3,029,767 + -0.7 3,029,767 + +0.6 3,029,768 - -0.9 3,029,843 + +0.8 3,029,843 + +1.1 3,029,843 + -0.4 3,029,844 - +1.2 3,029,854 + +0.2 3,029,855 - -1.2 3,029,910 + -1.4 3,029,910 + +0.2 3,029,910 + -2.2 3,029,910 + +1.7 3,029,911 - -0.7 3,029,911 - +1.3 3,029,911 - -2.2 3,029,911 - +0.9 3,029,911 - +0.2 3,029,926 - -0.1 3,030,125 + Pf6N2E2_2571 0.35 +1.3 3,030,125 + Pf6N2E2_2571 0.35 -1.6 3,030,126 - Pf6N2E2_2571 0.35 -1.0 3,030,126 - Pf6N2E2_2571 0.35 +1.6 3,030,126 - Pf6N2E2_2571 0.35 -3.3 3,030,377 + Pf6N2E2_2571 0.67 -1.1 3,030,378 - Pf6N2E2_2571 0.67 -2.1 3,030,378 - Pf6N2E2_2571 0.67 -0.3 3,030,378 - Pf6N2E2_2571 0.67 -1.3 3,030,378 - Pf6N2E2_2571 0.67 -2.2 3,030,378 - Pf6N2E2_2571 0.67 +1.5 3,030,378 - Pf6N2E2_2571 0.67 -0.7 3,030,645 + -2.4 3,030,645 + +1.2 3,030,645 + -2.2 3,030,645 + +0.5 3,030,646 - -1.2 3,030,646 - -0.6 3,030,734 + Pf6N2E2_2572 0.18 +0.4 3,030,735 - Pf6N2E2_2572 0.18 -0.1 3,030,743 - Pf6N2E2_2572 0.21 -2.1 3,030,988 + Pf6N2E2_2572 0.84 -1.3 3,031,067 + -0.5 3,031,067 + -2.6 3,031,068 - +1.5 3,031,154 + +0.3 3,031,155 - -1.3 3,031,155 - -0.9 3,031,261 - +0.6 3,031,261 - -2.3 3,031,334 - Pf6N2E2_2573 0.18 -2.5 3,031,334 - Pf6N2E2_2573 0.18 -1.0 3,031,334 - Pf6N2E2_2573 0.18 -0.2 3,031,520 + Pf6N2E2_2573 0.43 +0.6 3,031,520 + Pf6N2E2_2573 0.43 -1.4 3,031,521 - Pf6N2E2_2573 0.43 -1.9 3,031,540 + Pf6N2E2_2573 0.45 +1.1 3,031,586 + Pf6N2E2_2573 0.51 -0.4 3,031,604 + Pf6N2E2_2573 0.54 -1.1 3,031,644 - Pf6N2E2_2573 0.59 -0.4 3,031,723 + Pf6N2E2_2573 0.70 -1.3 3,031,723 + Pf6N2E2_2573 0.70 +0.5 3,031,724 - Pf6N2E2_2573 0.70 +0.4 3,031,724 - Pf6N2E2_2573 0.70 -0.6 3,031,724 - Pf6N2E2_2573 0.70 -2.3 3,031,757 - Pf6N2E2_2573 0.74 -1.2 3,031,846 + Pf6N2E2_2573 0.86 -1.0 3,031,846 + Pf6N2E2_2573 0.86 +2.3 3,031,847 - Pf6N2E2_2573 0.87 +0.3 3,031,892 - -1.4 3,031,919 - -3.4 3,031,919 - +0.8 3,031,931 - -0.7 3,031,931 - +0.6 3,031,947 - -2.1
Or see this region's nucleotide sequence