Experiment: Zinc chloride 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2484 and Pf6N2E2_2485 are separated by 258 nucleotides Pf6N2E2_2485 and Pf6N2E2_2486 are separated by 27 nucleotides Pf6N2E2_2486 and Pf6N2E2_2487 are separated by 348 nucleotides
Pf6N2E2_2484 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 2,930,401 to 2,931,882
_2484
Pf6N2E2_2485 - Phage terminase, small subunit, at 2,932,141 to 2,932,515
_2485
Pf6N2E2_2486 - TesB-like acyl-CoA thioesterase 1, at 2,932,543 to 2,933,340
_2486
Pf6N2E2_2487 - FIG00956090: hypothetical protein, at 2,933,689 to 2,934,450
_2487
Position (kb)
2932
2933
2934 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2931.765 kb on + strand at 2931.765 kb on + strand at 2931.766 kb on - strand at 2931.880 kb on + strand at 2932.015 kb on + strand at 2932.015 kb on + strand at 2932.015 kb on + strand at 2932.015 kb on + strand at 2932.015 kb on + strand at 2932.015 kb on + strand at 2932.016 kb on - strand at 2932.044 kb on + strand at 2932.045 kb on - strand at 2932.055 kb on - strand at 2932.134 kb on + strand at 2932.134 kb on + strand at 2932.134 kb on + strand at 2932.134 kb on + strand at 2932.187 kb on - strand, within Pf6N2E2_2485 at 2932.658 kb on + strand, within Pf6N2E2_2486 at 2932.658 kb on + strand, within Pf6N2E2_2486 at 2932.658 kb on + strand, within Pf6N2E2_2486 at 2932.932 kb on + strand, within Pf6N2E2_2486 at 2932.946 kb on + strand, within Pf6N2E2_2486 at 2932.946 kb on + strand, within Pf6N2E2_2486 at 2932.946 kb on + strand, within Pf6N2E2_2486 at 2932.946 kb on + strand, within Pf6N2E2_2486 at 2932.946 kb on + strand, within Pf6N2E2_2486 at 2932.946 kb on + strand, within Pf6N2E2_2486 at 2932.947 kb on - strand, within Pf6N2E2_2486 at 2932.947 kb on - strand, within Pf6N2E2_2486 at 2932.947 kb on - strand, within Pf6N2E2_2486 at 2933.057 kb on - strand, within Pf6N2E2_2486 at 2933.116 kb on + strand, within Pf6N2E2_2486 at 2933.116 kb on + strand, within Pf6N2E2_2486 at 2933.117 kb on - strand, within Pf6N2E2_2486 at 2933.225 kb on + strand, within Pf6N2E2_2486 at 2933.225 kb on + strand, within Pf6N2E2_2486 at 2933.225 kb on + strand, within Pf6N2E2_2486 at 2933.225 kb on + strand, within Pf6N2E2_2486 at 2933.226 kb on - strand at 2933.467 kb on + strand at 2933.467 kb on + strand at 2933.468 kb on - strand at 2933.468 kb on - strand at 2933.468 kb on - strand at 2933.471 kb on - strand at 2933.471 kb on - strand at 2933.471 kb on - strand at 2933.471 kb on - strand at 2933.471 kb on - strand at 2933.482 kb on - strand at 2933.482 kb on - strand at 2933.482 kb on - strand at 2933.647 kb on + strand at 2934.146 kb on + strand, within Pf6N2E2_2487
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc chloride 0.0000015625 M remove 2,931,765 + -0.8 2,931,765 + -0.7 2,931,766 - -2.2 2,931,880 + +0.6 2,932,015 + +0.9 2,932,015 + -0.8 2,932,015 + -1.4 2,932,015 + -0.5 2,932,015 + +1.4 2,932,015 + -0.3 2,932,016 - -1.2 2,932,044 + +0.9 2,932,045 - +0.5 2,932,055 - -0.5 2,932,134 + -1.4 2,932,134 + -0.4 2,932,134 + -0.9 2,932,134 + +0.2 2,932,187 - Pf6N2E2_2485 0.12 -2.6 2,932,658 + Pf6N2E2_2486 0.14 -0.1 2,932,658 + Pf6N2E2_2486 0.14 +0.7 2,932,658 + Pf6N2E2_2486 0.14 +2.2 2,932,932 + Pf6N2E2_2486 0.49 +1.1 2,932,946 + Pf6N2E2_2486 0.51 -0.1 2,932,946 + Pf6N2E2_2486 0.51 -0.8 2,932,946 + Pf6N2E2_2486 0.51 +1.2 2,932,946 + Pf6N2E2_2486 0.51 +1.2 2,932,946 + Pf6N2E2_2486 0.51 +1.2 2,932,946 + Pf6N2E2_2486 0.51 +0.8 2,932,947 - Pf6N2E2_2486 0.51 -1.9 2,932,947 - Pf6N2E2_2486 0.51 -0.0 2,932,947 - Pf6N2E2_2486 0.51 +1.4 2,933,057 - Pf6N2E2_2486 0.64 -0.7 2,933,116 + Pf6N2E2_2486 0.72 +1.4 2,933,116 + Pf6N2E2_2486 0.72 -0.1 2,933,117 - Pf6N2E2_2486 0.72 -2.0 2,933,225 + Pf6N2E2_2486 0.85 +1.1 2,933,225 + Pf6N2E2_2486 0.85 -1.6 2,933,225 + Pf6N2E2_2486 0.85 +1.4 2,933,225 + Pf6N2E2_2486 0.85 -1.0 2,933,226 - +2.5 2,933,467 + -1.4 2,933,467 + -0.8 2,933,468 - +2.4 2,933,468 - -1.3 2,933,468 - +0.6 2,933,471 - +1.6 2,933,471 - -2.7 2,933,471 - +0.0 2,933,471 - -1.1 2,933,471 - -0.5 2,933,482 - +0.7 2,933,482 - +0.4 2,933,482 - +0.2 2,933,647 + -3.1 2,934,146 + Pf6N2E2_2487 0.60 -2.1
Or see this region's nucleotide sequence